Chloroplast Motifs - Imperfect AAAAG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014346 | AAAAG | 5 | 394622 | 394645 | 24 | Floydiella terrestris chloroplast |
2 | NC_001865 | AAAAG | 5 | 54606 | 54630 | 25 | Chlorella vulgaris chloroplast |
3 | NC_014569 | AAAAG | 4 | 32701 | 32721 | 21 | Erodium texanum plastid |
4 | NC_014582 | AAAAG | 4 | 16028 | 16046 | 19 | Monsonia speciosa plastid |
5 | NC_012978 | AAAAG | 4 | 102191 | 102209 | 19 | Parachlorella kessleri chloroplast |
6 | NC_014346 | AAAAG | 3 | 44393 | 44406 | 14 | Floydiella terrestris chloroplast |
7 | NC_014346 | AAAAG | 3 | 85214 | 85227 | 14 | Floydiella terrestris chloroplast |
8 | NC_014346 | AAAAG | 3 | 111784 | 111797 | 14 | Floydiella terrestris chloroplast |
9 | NC_014346 | AAAAG | 3 | 138388 | 138401 | 14 | Floydiella terrestris chloroplast |
10 | NC_014346 | AAAAG | 3 | 238462 | 238476 | 15 | Floydiella terrestris chloroplast |
11 | NC_014346 | AAAAG | 3 | 241217 | 241231 | 15 | Floydiella terrestris chloroplast |
12 | NC_014346 | AAAAG | 3 | 306735 | 306748 | 14 | Floydiella terrestris chloroplast |
13 | NC_014346 | AAAAG | 3 | 321938 | 321951 | 14 | Floydiella terrestris chloroplast |
14 | NC_014346 | AAAAG | 3 | 401323 | 401336 | 14 | Floydiella terrestris chloroplast |
15 | NC_014346 | AAAAG | 3 | 404866 | 404879 | 14 | Floydiella terrestris chloroplast |
16 | NC_014589 | AAAAG | 3 | 11691 | 11705 | 15 | Cathaya argyrophylla chloroplast |
17 | NC_015308 | AAAAG | 3 | 133506 | 133520 | 15 | Hevea brasiliensis chloroplast |
18 | NC_015645 | AAAAG | 3 | 72356 | 72369 | 14 | Schizomeris leibleinii chloroplast |
19 | NC_015645 | AAAAG | 3 | 145255 | 145268 | 14 | Schizomeris leibleinii chloroplast |
20 | NC_015803 | AAAAG | 3 | 23047 | 23060 | 14 | Indocalamus longiauritus plastid |
21 | NC_015803 | AAAAG | 3 | 36196 | 36209 | 14 | Indocalamus longiauritus plastid |
22 | NC_015817 | AAAAG | 3 | 23078 | 23091 | 14 | Phyllostachys edulis chloroplast |
23 | NC_015817 | AAAAG | 3 | 36131 | 36144 | 14 | Phyllostachys edulis chloroplast |
24 | NC_015820 | AAAAG | 3 | 23095 | 23108 | 14 | Acidosasa purpurea chloroplast |
25 | NC_015820 | AAAAG | 3 | 36218 | 36231 | 14 | Acidosasa purpurea chloroplast |
26 | NC_015826 | AAAAG | 3 | 23059 | 23072 | 14 | Phyllostachys nigra var. henonis chloroplast |
27 | NC_015826 | AAAAG | 3 | 36112 | 36125 | 14 | Phyllostachys nigra var. henonis chloroplast |
28 | NC_015830 | AAAAG | 3 | 22658 | 22671 | 14 | Bambusa emeiensis chloroplast |
29 | NC_015831 | AAAAG | 3 | 23126 | 23139 | 14 | Ferrocalamus rimosivaginus plastid |
30 | NC_015831 | AAAAG | 3 | 35880 | 35893 | 14 | Ferrocalamus rimosivaginus plastid |
31 | NC_015892 | AAAAG | 3 | 135352 | 135366 | 15 | Magnolia kwangsiensis chloroplast |
32 | NC_015990 | AAAAG | 3 | 22185 | 22198 | 14 | Panicum virgatum chloroplast |
33 | NC_016058 | AAAAG | 3 | 30116 | 30129 | 14 | Larix decidua chloroplast |
34 | NC_016677 | AAAAG | 3 | 77287 | 77300 | 14 | Leersia tisserantii plastid |
35 | NC_016699 | AAAAG | 3 | 23089 | 23102 | 14 | Phyllostachys propinqua chloroplast |
36 | NC_016699 | AAAAG | 3 | 36143 | 36156 | 14 | Phyllostachys propinqua chloroplast |
37 | NC_016718 | AAAAG | 3 | 77375 | 77389 | 15 | Rhynchoryza subulata plastid |
38 | NC_016732 | AAAAG | 3 | 82590 | 82603 | 14 | Dunaliella salina chloroplast |
39 | NC_016736 | AAAAG | 3 | 121047 | 121061 | 15 | Ricinus communis chloroplast |
40 | NC_016736 | AAAAG | 3 | 134718 | 134732 | 15 | Ricinus communis chloroplast |
41 | NC_017006 | AAAAG | 3 | 3781 | 3795 | 15 | Mankyua chejuensis chloroplast |
42 | NC_017602 | AAAAG | 3 | 51325 | 51339 | 15 | Elaeis guineensis chloroplast |
43 | NC_017609 | AAAAG | 3 | 136692 | 136705 | 14 | Phalaenopsis equestris chloroplast |
44 | NC_018051 | AAAAG | 3 | 1007 | 1020 | 14 | Vigna unguiculata chloroplast |
45 | NC_018114 | AAAAG | 3 | 75212 | 75226 | 15 | Erycina pusilla chloroplast |
46 | NC_018357 | AAAAG | 3 | 132526 | 132540 | 15 | Magnolia denudata chloroplast |
47 | NC_018357 | AAAAG | 3 | 135653 | 135666 | 14 | Magnolia denudata chloroplast |
48 | NC_019616 | AAAAG | 3 | 61648 | 61661 | 14 | Vaccinium macrocarpon plastid |
49 | NC_019648 | AAAAG | 3 | 3595 | 3609 | 15 | Festuca altissima plastid |
50 | NC_019649 | AAAAG | 3 | 48995 | 49009 | 15 | Festuca ovina plastid |
51 | NC_020098 | AAAAG | 3 | 127303 | 127316 | 14 | Tectona grandis chloroplast |
52 | NC_020317 | AAAAG | 3 | 132618 | 132632 | 15 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
53 | NC_020341 | AAAAG | 3 | 23047 | 23060 | 14 | Arundinaria gigantea chloroplast |
54 | NC_020341 | AAAAG | 3 | 36131 | 36144 | 14 | Arundinaria gigantea chloroplast |
55 | NC_020364 | AAAAG | 3 | 51192 | 51206 | 15 | Pseudophoenix vinifera plastid |
56 | NC_020460 | AAAAG | 3 | 82893 | 82906 | 14 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
57 | NC_021372 | AAAAG | 3 | 3627 | 3641 | 15 | Pharus latifolius chloroplast |
58 | NC_021372 | AAAAG | 3 | 22897 | 22910 | 14 | Pharus latifolius chloroplast |
59 | NC_021430 | AAAAG | 3 | 121480 | 121494 | 15 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
60 | NC_021431 | AAAAG | 3 | 121568 | 121582 | 15 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
61 | NC_021438 | AAAAG | 3 | 26102 | 26115 | 14 | Gnetum montanum chloroplast |
62 | NC_021761 | AAAAG | 3 | 44009 | 44022 | 14 | Secale cereale chloroplast |
63 | NC_001666 | AAAAG | 3 | 22865 | 22878 | 14 | Zea mays chloroplast |
64 | NC_001865 | AAAAG | 3 | 16149 | 16162 | 14 | Chlorella vulgaris chloroplast |
65 | NC_001865 | AAAAG | 3 | 19132 | 19146 | 15 | Chlorella vulgaris chloroplast |
66 | NC_001865 | AAAAG | 3 | 36342 | 36355 | 14 | Chlorella vulgaris chloroplast |
67 | NC_001865 | AAAAG | 3 | 91578 | 91592 | 15 | Chlorella vulgaris chloroplast |
68 | NC_001865 | AAAAG | 3 | 104886 | 104900 | 15 | Chlorella vulgaris chloroplast |
69 | NC_001865 | AAAAG | 3 | 116462 | 116475 | 14 | Chlorella vulgaris chloroplast |
70 | NC_002693 | AAAAG | 3 | 16007 | 16021 | 15 | Oenothera elata subsp. hookeri plastid plastome I |
71 | NC_002693 | AAAAG | 3 | 49608 | 49621 | 14 | Oenothera elata subsp. hookeri plastid plastome I |
72 | NC_004543 | AAAAG | 3 | 46651 | 46665 | 15 | Anthoceros formosae chloroplast |
73 | NC_005086 | AAAAG | 3 | 65178 | 65192 | 15 | Amborella trichopoda chloroplast |
74 | NC_005878 | AAAAG | 3 | 84944 | 84957 | 14 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
75 | NC_006084 | AAAAG | 3 | 23317 | 23330 | 14 | Saccharum hybrid cultivar NCo 310 chloroplast |
76 | NC_007407 | AAAAG | 3 | 108314 | 108327 | 14 | Acorus calamus plastid |
77 | NC_007499 | AAAAG | 3 | 136701 | 136714 | 14 | Phalaenopsis aphrodite subsp. formosana chloroplast |
78 | NC_007957 | AAAAG | 3 | 127534 | 127547 | 14 | Vitis vinifera chloroplast |
79 | NC_008097 | AAAAG | 3 | 2473 | 2487 | 15 | Chara vulgaris chloroplast |
80 | NC_008097 | AAAAG | 3 | 17926 | 17939 | 14 | Chara vulgaris chloroplast |
81 | NC_008101 | AAAAG | 3 | 77543 | 77558 | 16 | Scenedesmus obliquus chloroplast |
82 | NC_008101 | AAAAG | 3 | 82519 | 82534 | 16 | Scenedesmus obliquus chloroplast |
83 | NC_008101 | AAAAG | 3 | 107422 | 107437 | 16 | Scenedesmus obliquus chloroplast |
84 | NC_008101 | AAAAG | 3 | 114389 | 114402 | 14 | Scenedesmus obliquus chloroplast |
85 | NC_008101 | AAAAG | 3 | 149887 | 149901 | 15 | Scenedesmus obliquus chloroplast |
86 | NC_008114 | AAAAG | 3 | 156909 | 156924 | 16 | Pseudendoclonium akinetum chloroplast |
87 | NC_008335 | AAAAG | 3 | 70756 | 70770 | 15 | Platanus occidentalis chloroplast |
88 | NC_008335 | AAAAG | 3 | 161731 | 161745 | 15 | Platanus occidentalis chloroplast |
89 | NC_008372 | AAAAG | 3 | 29449 | 29462 | 14 | Stigeoclonium helveticum chloroplast |
90 | NC_008372 | AAAAG | 3 | 62002 | 62015 | 14 | Stigeoclonium helveticum chloroplast |
91 | NC_008372 | AAAAG | 3 | 81806 | 81819 | 14 | Stigeoclonium helveticum chloroplast |
92 | NC_008372 | AAAAG | 3 | 210647 | 210660 | 14 | Stigeoclonium helveticum chloroplast |
93 | NC_008454 | AAAAG | 3 | 101055 | 101070 | 16 | Pelargonium x hortorum chloroplast |
94 | NC_008454 | AAAAG | 3 | 165192 | 165207 | 16 | Pelargonium x hortorum chloroplast |
95 | NC_008602 | AAAAG | 3 | 23659 | 23672 | 14 | Sorghum bicolor chloroplast |
96 | NC_008602 | AAAAG | 3 | 36717 | 36730 | 14 | Sorghum bicolor chloroplast |
97 | NC_008822 | AAAAG | 3 | 54267 | 54281 | 15 | Chlorokybus atmophyticus chloroplast |
98 | NC_008822 | AAAAG | 3 | 95104 | 95118 | 15 | Chlorokybus atmophyticus chloroplast |
99 | NC_009266 | AAAAG | 3 | 32065 | 32078 | 14 | Aethionema grandiflorum chloroplast |
100 | NC_009267 | AAAAG | 3 | 32068 | 32082 | 15 | Olimarabidopsis pumila chloroplast |
101 | NC_009268 | AAAAG | 3 | 57872 | 57885 | 14 | Arabis hirsuta chloroplast |
102 | NC_009766 | AAAAG | 3 | 97708 | 97722 | 15 | Cuscuta reflexa chloroplast |
103 | NC_009949 | AAAAG | 3 | 45290 | 45304 | 15 | Cuscuta obtusiflora chloroplast |
104 | NC_010093 | AAAAG | 3 | 107990 | 108003 | 14 | Acorus americanus chloroplast |
105 | NC_010358 | AAAAG | 3 | 15543 | 15557 | 15 | Oenothera argillicola chloroplast |
106 | NC_010358 | AAAAG | 3 | 49137 | 49150 | 14 | Oenothera argillicola chloroplast |
107 | NC_010360 | AAAAG | 3 | 15911 | 15925 | 15 | Oenothera glazioviana chloroplast |
108 | NC_010360 | AAAAG | 3 | 49450 | 49463 | 14 | Oenothera glazioviana chloroplast |
109 | NC_010361 | AAAAG | 3 | 16001 | 16015 | 15 | Oenothera biennis chloroplast |
110 | NC_010361 | AAAAG | 3 | 49538 | 49551 | 14 | Oenothera biennis chloroplast |
111 | NC_010362 | AAAAG | 3 | 15804 | 15818 | 15 | Oenothera parviflora chloroplast |
112 | NC_010362 | AAAAG | 3 | 49412 | 49425 | 14 | Oenothera parviflora chloroplast |
113 | NC_010654 | AAAAG | 3 | 70275 | 70289 | 15 | Welwitschia mirabilis chloroplast |
114 | NC_011713 | AAAAG | 3 | 135706 | 135719 | 14 | Festuca arundinacea chloroplast |
115 | NC_011942 | AAAAG | 3 | 173 | 187 | 15 | Gnetum parvifolium chloroplast |
116 | NC_011942 | AAAAG | 3 | 70416 | 70430 | 15 | Gnetum parvifolium chloroplast |
117 | NC_012224 | AAAAG | 3 | 122544 | 122557 | 14 | Jatropha curcas chloroplast |
118 | NC_012927 | AAAAG | 3 | 22592 | 22605 | 14 | Bambusa oldhamii chloroplast |
119 | NC_012978 | AAAAG | 3 | 64776 | 64790 | 15 | Parachlorella kessleri chloroplast |
120 | NC_013088 | AAAAG | 3 | 22741 | 22754 | 14 | Dendrocalamus latiflorus chloroplast |
121 | NC_013273 | AAAAG | 3 | 23225 | 23238 | 14 | Coix lacryma-jobi chloroplast |
122 | NC_013498 | AAAAG | 3 | 128523 | 128536 | 14 | Ectocarpus siliculosus chloroplast |
123 | NC_013703 | AAAAG | 3 | 51248 | 51261 | 14 | Cryptomonas paramecium plastid |
124 | NC_013843 | AAAAG | 3 | 1031 | 1044 | 14 | Vigna radiata chloroplast |