Chloroplast Motifs - Imperfect ACTAAT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014676 | ACTAAT | 10 | 144942 | 144996 | 55 | Theobroma cacao chloroplast |
2 | NC_020364 | ACTAAT | 7 | 141665 | 141706 | 42 | Pseudophoenix vinifera plastid |
3 | NC_015983 | ACTAAT | 6 | 141112 | 141145 | 34 | Cucumis melo subsp. melo chloroplast |
4 | NC_004561 | ACTAAT | 6 | 141450 | 141484 | 35 | Atropa belladonna chloroplast |
5 | NC_014674 | ACTAAT | 5 | 145991 | 146019 | 29 | Castanea mollissima chloroplast |
6 | NC_019648 | ACTAAT | 5 | 124918 | 124948 | 31 | Festuca altissima plastid |
7 | NC_019649 | ACTAAT | 5 | 122793 | 122823 | 31 | Festuca ovina plastid |
8 | NC_020152 | ACTAAT | 5 | 146303 | 146331 | 29 | Quercus rubra plastid |
9 | NC_008591 | ACTAAT | 5 | 126629 | 126659 | 31 | Agrostis stolonifera chloroplast |
10 | NC_014570 | ACTAAT | 4 | 144649 | 144671 | 23 | Eucalyptus grandis chloroplast |
11 | NC_014697 | ACTAAT | 4 | 142166 | 142188 | 23 | Prunus persica chloroplast |
12 | NC_015204 | ACTAAT | 4 | 144594 | 144616 | 23 | Gossypium thurberi chloroplast |
13 | NC_015401 | ACTAAT | 4 | 140788 | 140809 | 22 | Olea europaea subsp. europaea plastid |
14 | NC_015604 | ACTAAT | 4 | 140775 | 140796 | 22 | Olea europaea subsp. cuspidata chloroplast |
15 | NC_015608 | ACTAAT | 4 | 140870 | 140891 | 22 | Olea woodiana subsp. woodiana chloroplast |
16 | NC_015623 | ACTAAT | 4 | 140809 | 140830 | 22 | Olea europaea subsp. maroccana chloroplast |
17 | NC_015892 | ACTAAT | 4 | 144177 | 144199 | 23 | Magnolia kwangsiensis chloroplast |
18 | NC_015996 | ACTAAT | 4 | 144333 | 144355 | 23 | Pyrus pyrifolia chloroplast |
19 | NC_016068 | ACTAAT | 4 | 140748 | 140769 | 22 | Nicotiana undulata chloroplast |
20 | NC_016468 | ACTAAT | 4 | 138387 | 138409 | 23 | Boea hygrometrica chloroplast |
21 | NC_016668 | ACTAAT | 4 | 144448 | 144470 | 23 | Gossypium raimondii chloroplast |
22 | NC_016670 | ACTAAT | 4 | 144711 | 144733 | 23 | Gossypium darwinii chloroplast |
23 | NC_016690 | ACTAAT | 4 | 144760 | 144782 | 23 | Gossypium tomentosum chloroplast |
24 | NC_016692 | ACTAAT | 4 | 144641 | 144663 | 23 | Gossypium herbaceum subsp. africanum chloroplast |
25 | NC_016708 | ACTAAT | 4 | 137765 | 137787 | 23 | Millettia pinnata chloroplast |
26 | NC_016711 | ACTAAT | 4 | 144640 | 144662 | 23 | Gossypium mustelinum chloroplast |
27 | NC_016712 | ACTAAT | 4 | 144559 | 144581 | 23 | Gossypium arboreum chloroplast |
28 | NC_016921 | ACTAAT | 4 | 141109 | 141131 | 23 | Pentactina rupicola chloroplast |
29 | NC_017602 | ACTAAT | 4 | 140984 | 141006 | 23 | Elaeis guineensis chloroplast |
30 | NC_017894 | ACTAAT | 4 | 144316 | 144338 | 23 | Gossypium gossypioides chloroplast |
31 | NC_018109 | ACTAAT | 4 | 143566 | 143588 | 23 | Gossypium incanum chloroplast |
32 | NC_018110 | ACTAAT | 4 | 143894 | 143916 | 23 | Gossypium somalense chloroplast |
33 | NC_018111 | ACTAAT | 4 | 143793 | 143815 | 23 | Gossypium capitis-viridis chloroplast |
34 | NC_018112 | ACTAAT | 4 | 143927 | 143949 | 23 | Gossypium areysianum chloroplast |
35 | NC_018113 | ACTAAT | 4 | 144212 | 144234 | 23 | Gossypium robinsonii chloroplast |
36 | NC_018117 | ACTAAT | 4 | 140724 | 140745 | 22 | Datura stramonium chloroplast |
37 | NC_018552 | ACTAAT | 4 | 141467 | 141488 | 22 | Capsicum annuum chloroplast |
38 | NC_020316 | ACTAAT | 4 | 144655 | 144677 | 23 | Magnolia officinalis chloroplast |
39 | NC_020317 | ACTAAT | 4 | 144567 | 144589 | 23 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
40 | NC_020318 | ACTAAT | 4 | 144098 | 144120 | 23 | Magnolia grandiflora voucher NJ016 chloroplast |
41 | NC_020366 | ACTAAT | 4 | 142173 | 142195 | 23 | Bismarckia nobilis plastid |
42 | NC_020367 | ACTAAT | 4 | 141717 | 141738 | 22 | Dasypogon bromeliifolius plastid |
43 | NC_021101 | ACTAAT | 4 | 141692 | 141714 | 23 | Francoa sonchifolia plastid |
44 | NC_021455 | ACTAAT | 4 | 140652 | 140674 | 23 | Prinsepia utilis plastid |
45 | NC_001879 | ACTAAT | 4 | 140811 | 140832 | 22 | Nicotiana tabacum plastid |
46 | NC_002694 | ACTAAT | 4 | 135349 | 135371 | 23 | Lotus japonicus chloroplast |
47 | NC_006290 | ACTAAT | 4 | 141652 | 141673 | 22 | Panax ginseng chloroplast |
48 | NC_007144 | ACTAAT | 4 | 140856 | 140878 | 23 | Cucumis sativus chloroplast |
49 | NC_007500 | ACTAAT | 4 | 140809 | 140830 | 22 | Nicotiana sylvestris chloroplast |
50 | NC_007602 | ACTAAT | 4 | 140550 | 140571 | 22 | Nicotiana tomentosiformis chloroplast |
51 | NC_007898 | ACTAAT | 4 | 140349 | 140370 | 22 | Solanum lycopersicum chloroplast |
52 | NC_007943 | ACTAAT | 4 | 140237 | 140258 | 22 | Solanum bulbocastanum chloroplast |
53 | NC_007944 | ACTAAT | 4 | 144644 | 144666 | 23 | Gossypium hirsutum chloroplast |
54 | NC_008096 | ACTAAT | 4 | 140190 | 140211 | 22 | Solanum tuberosum chloroplast |
55 | NC_008115 | ACTAAT | 4 | 144792 | 144814 | 23 | Eucalyptus globulus subsp. globulus chloroplast |
56 | NC_008235 | ACTAAT | 4 | 140421 | 140443 | 23 | Populus alba chloroplast |
57 | NC_008326 | ACTAAT | 4 | 144386 | 144408 | 23 | Liriodendron tulipifera chloroplast |
58 | NC_008334 | ACTAAT | 4 | 143918 | 143940 | 23 | Citrus sinensis chloroplast |
59 | NC_008641 | ACTAAT | 4 | 144671 | 144693 | 23 | Gossypium barbadense chloroplast |
60 | NC_009143 | ACTAAT | 4 | 140938 | 140960 | 23 | Populus trichocarpa chloroplast |
61 | NC_010323 | ACTAAT | 4 | 144374 | 144396 | 23 | Carica papaya chloroplast |
62 | NC_013991 | ACTAAT | 4 | 142286 | 142308 | 23 | Phoenix dactylifera chloroplast |
63 | NC_013707 | ACTAAT | 4 | 140778 | 140799 | 22 | Olea europaea chloroplast |
64 | NC_014569 | ACTAAT | 3 | 111878 | 111894 | 17 | Erodium texanum plastid |
65 | NC_015204 | ACTAAT | 3 | 144574 | 144590 | 17 | Gossypium thurberi chloroplast |
66 | NC_015605 | ACTAAT | 3 | 147629 | 147645 | 17 | Nelumbo lutea chloroplast |
67 | NC_015610 | ACTAAT | 3 | 147718 | 147734 | 17 | Nelumbo nucifera chloroplast |
68 | NC_015891 | ACTAAT | 3 | 153114 | 153130 | 17 | Spirodela polyrhiza chloroplast |
69 | NC_015894 | ACTAAT | 3 | 153816 | 153832 | 17 | Wolffiella lingulata chloroplast |
70 | NC_015899 | ACTAAT | 3 | 152989 | 153005 | 17 | Wolffia australiana chloroplast |
71 | NC_016430 | ACTAAT | 3 | 142079 | 142095 | 17 | Eleutherococcus senticosus chloroplast |
72 | NC_016668 | ACTAAT | 3 | 144428 | 144444 | 17 | Gossypium raimondii chloroplast |
73 | NC_016670 | ACTAAT | 3 | 144691 | 144707 | 17 | Gossypium darwinii chloroplast |
74 | NC_016690 | ACTAAT | 3 | 144740 | 144756 | 17 | Gossypium tomentosum chloroplast |
75 | NC_016692 | ACTAAT | 3 | 144621 | 144637 | 17 | Gossypium herbaceum subsp. africanum chloroplast |
76 | NC_016711 | ACTAAT | 3 | 144620 | 144636 | 17 | Gossypium mustelinum chloroplast |
77 | NC_016712 | ACTAAT | 3 | 144539 | 144555 | 17 | Gossypium arboreum chloroplast |
78 | NC_016727 | ACTAAT | 3 | 137390 | 137406 | 17 | Silene vulgaris chloroplast |
79 | NC_016728 | ACTAAT | 3 | 139297 | 139313 | 17 | Silene noctiflora chloroplast |
80 | NC_016729 | ACTAAT | 3 | 135404 | 135420 | 17 | Silene conica chloroplast |
81 | NC_016730 | ACTAAT | 3 | 137555 | 137571 | 17 | Silene latifolia chloroplast |
82 | NC_016753 | ACTAAT | 3 | 146623 | 146639 | 17 | Colocasia esculenta chloroplast |
83 | NC_017894 | ACTAAT | 3 | 144296 | 144312 | 17 | Gossypium gossypioides chloroplast |
84 | NC_018109 | ACTAAT | 3 | 143546 | 143562 | 17 | Gossypium incanum chloroplast |
85 | NC_018110 | ACTAAT | 3 | 143874 | 143890 | 17 | Gossypium somalense chloroplast |
86 | NC_018111 | ACTAAT | 3 | 143773 | 143789 | 17 | Gossypium capitis-viridis chloroplast |
87 | NC_018112 | ACTAAT | 3 | 143907 | 143923 | 17 | Gossypium areysianum chloroplast |
88 | NC_018113 | ACTAAT | 3 | 144192 | 144208 | 17 | Gossypium robinsonii chloroplast |
89 | NC_018357 | ACTAAT | 3 | 144522 | 144538 | 17 | Magnolia denudata chloroplast |
90 | NC_018565 | ACTAAT | 3 | 139274 | 139290 | 17 | Pachycladon enysii chloroplast |
91 | NC_020019 | ACTAAT | 3 | 141824 | 141840 | 17 | Camellia sinensis chloroplast |
92 | NC_020364 | ACTAAT | 3 | 51359 | 51376 | 18 | Pseudophoenix vinifera plastid |
93 | NC_020365 | ACTAAT | 3 | 141284 | 141300 | 17 | Calamus caryotoides plastid |
94 | NC_021102 | ACTAAT | 3 | 138851 | 138867 | 17 | Pachycladon cheesemanii chloroplast |
95 | NC_021423 | ACTAAT | 3 | 139839 | 139855 | 17 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
96 | NC_021425 | ACTAAT | 3 | 145093 | 145109 | 17 | Tetracentron sinense chloroplast |
97 | NC_021449 | ACTAAT | 3 | 137391 | 137407 | 17 | Utricularia gibba chloroplast |
98 | NC_021636 | ACTAAT | 3 | 10707 | 10725 | 19 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
99 | NC_021645 | ACTAAT | 3 | 10569 | 10587 | 19 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
100 | NC_021646 | ACTAAT | 3 | 10547 | 10565 | 19 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
101 | NC_021647 | ACTAAT | 3 | 10701 | 10719 | 19 | Glycine canescens voucher CSIRO:G1232 chloroplast |
102 | NC_021648 | ACTAAT | 3 | 10693 | 10711 | 19 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
103 | NC_021649 | ACTAAT | 3 | 10701 | 10719 | 19 | Glycine falcata voucher CSIRO:G1718 chloroplast |
104 | NC_021650 | ACTAAT | 3 | 10695 | 10713 | 19 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
105 | NC_007407 | ACTAAT | 3 | 139304 | 139320 | 17 | Acorus calamus plastid |
106 | NC_007942 | ACTAAT | 3 | 10687 | 10705 | 19 | Glycine max chloroplast |
107 | NC_007944 | ACTAAT | 3 | 144624 | 144640 | 17 | Gossypium hirsutum chloroplast |
108 | NC_007957 | ACTAAT | 3 | 145326 | 145342 | 17 | Vitis vinifera chloroplast |
109 | NC_008336 | ACTAAT | 3 | 141176 | 141192 | 17 | Nandina domestica chloroplast |
110 | NC_008457 | ACTAAT | 3 | 144876 | 144892 | 17 | Piper cenocladum chloroplast |
111 | NC_008535 | ACTAAT | 3 | 139985 | 140001 | 17 | Coffea arabica chloroplast |
112 | NC_008641 | ACTAAT | 3 | 144651 | 144667 | 17 | Gossypium barbadense chloroplast |
113 | NC_009265 | ACTAAT | 3 | 138507 | 138523 | 17 | Aethionema cordifolium chloroplast |
114 | NC_009266 | ACTAAT | 3 | 138610 | 138626 | 17 | Aethionema grandiflorum chloroplast |
115 | NC_009267 | ACTAAT | 3 | 139091 | 139107 | 17 | Olimarabidopsis pumila chloroplast |
116 | NC_009268 | ACTAAT | 3 | 138037 | 138053 | 17 | Arabis hirsuta chloroplast |
117 | NC_009269 | ACTAAT | 3 | 138885 | 138901 | 17 | Barbarea verna chloroplast |
118 | NC_009270 | ACTAAT | 3 | 138859 | 138875 | 17 | Capsella bursa-pastoris chloroplast |
119 | NC_009271 | ACTAAT | 3 | 139520 | 139536 | 17 | Crucihimalaya wallichii chloroplast |
120 | NC_009272 | ACTAAT | 3 | 137704 | 137720 | 17 | Draba nemorosa chloroplast |
121 | NC_009274 | ACTAAT | 3 | 136982 | 136998 | 17 | Lobularia maritima chloroplast |
122 | NC_009275 | ACTAAT | 3 | 139466 | 139482 | 17 | Nasturtium officinale chloroplast |
123 | NC_009598 | ACTAAT | 3 | 142645 | 142661 | 17 | Chloranthus spicatus chloroplast |
124 | NC_009599 | ACTAAT | 3 | 143449 | 143465 | 17 | Buxus microphylla chloroplast |
125 | NC_009600 | ACTAAT | 3 | 143679 | 143695 | 17 | Illicium oligandrum chloroplast |
126 | NC_009601 | ACTAAT | 3 | 137116 | 137132 | 17 | Dioscorea elephantipes chloroplast |
127 | NC_010093 | ACTAAT | 3 | 138974 | 138990 | 17 | Acorus americanus chloroplast |
128 | NC_010109 | ACTAAT | 3 | 150908 | 150924 | 17 | Lemna minor chloroplast |
129 | NC_013823 | ACTAAT | 3 | 145529 | 145545 | 17 | Typha latifolia chloroplast |
130 | NC_014062 | ACTAAT | 3 | 129334 | 129352 | 19 | Anomochloa marantoidea chloroplast |
131 | NC_014062 | ACTAAT | 3 | 129369 | 129387 | 19 | Anomochloa marantoidea chloroplast |
132 | NC_014062 | ACTAAT | 3 | 129404 | 129422 | 19 | Anomochloa marantoidea chloroplast |