ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect ACTAAT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014676ACTAAT1014494214499655Theobroma cacao chloroplast
2NC_020364ACTAAT714166514170642Pseudophoenix vinifera plastid
3NC_015983ACTAAT614111214114534Cucumis melo subsp. melo chloroplast
4NC_004561ACTAAT614145014148435 Atropa belladonna chloroplast
5NC_014674ACTAAT514599114601929Castanea mollissima chloroplast
6NC_019648ACTAAT512491812494831Festuca altissima plastid
7NC_019649ACTAAT512279312282331Festuca ovina plastid
8NC_020152ACTAAT514630314633129Quercus rubra plastid
9NC_008591ACTAAT512662912665931 Agrostis stolonifera chloroplast
10NC_014570ACTAAT414464914467123Eucalyptus grandis chloroplast
11NC_014697ACTAAT414216614218823Prunus persica chloroplast
12NC_015204ACTAAT414459414461623Gossypium thurberi chloroplast
13NC_015401ACTAAT414078814080922Olea europaea subsp. europaea plastid
14NC_015604ACTAAT414077514079622Olea europaea subsp. cuspidata chloroplast
15NC_015608ACTAAT414087014089122Olea woodiana subsp. woodiana chloroplast
16NC_015623ACTAAT414080914083022Olea europaea subsp. maroccana chloroplast
17NC_015892ACTAAT414417714419923Magnolia kwangsiensis chloroplast
18NC_015996ACTAAT414433314435523Pyrus pyrifolia chloroplast
19NC_016068ACTAAT414074814076922Nicotiana undulata chloroplast
20NC_016468ACTAAT413838713840923Boea hygrometrica chloroplast
21NC_016668ACTAAT414444814447023Gossypium raimondii chloroplast
22NC_016670ACTAAT414471114473323Gossypium darwinii chloroplast
23NC_016690ACTAAT414476014478223Gossypium tomentosum chloroplast
24NC_016692ACTAAT414464114466323Gossypium herbaceum subsp. africanum chloroplast
25NC_016708ACTAAT413776513778723Millettia pinnata chloroplast
26NC_016711ACTAAT414464014466223Gossypium mustelinum chloroplast
27NC_016712ACTAAT414455914458123Gossypium arboreum chloroplast
28NC_016921ACTAAT414110914113123Pentactina rupicola chloroplast
29NC_017602ACTAAT414098414100623Elaeis guineensis chloroplast
30NC_017894ACTAAT414431614433823Gossypium gossypioides chloroplast
31NC_018109ACTAAT414356614358823Gossypium incanum chloroplast
32NC_018110ACTAAT414389414391623Gossypium somalense chloroplast
33NC_018111ACTAAT414379314381523Gossypium capitis-viridis chloroplast
34NC_018112ACTAAT414392714394923Gossypium areysianum chloroplast
35NC_018113ACTAAT414421214423423Gossypium robinsonii chloroplast
36NC_018117ACTAAT414072414074522Datura stramonium chloroplast
37NC_018552ACTAAT414146714148822Capsicum annuum chloroplast
38NC_020316ACTAAT414465514467723Magnolia officinalis chloroplast
39NC_020317ACTAAT414456714458923Magnolia officinalis subsp. biloba voucher SC001 chloroplast
40NC_020318ACTAAT414409814412023Magnolia grandiflora voucher NJ016 chloroplast
41NC_020366ACTAAT414217314219523Bismarckia nobilis plastid
42NC_020367ACTAAT414171714173822Dasypogon bromeliifolius plastid
43NC_021101ACTAAT414169214171423Francoa sonchifolia plastid
44NC_021455ACTAAT414065214067423Prinsepia utilis plastid
45NC_001879ACTAAT414081114083222 Nicotiana tabacum plastid
46NC_002694ACTAAT413534913537123 Lotus japonicus chloroplast
47NC_006290ACTAAT414165214167322 Panax ginseng chloroplast
48NC_007144ACTAAT414085614087823 Cucumis sativus chloroplast
49NC_007500ACTAAT414080914083022 Nicotiana sylvestris chloroplast
50NC_007602ACTAAT414055014057122 Nicotiana tomentosiformis chloroplast
51NC_007898ACTAAT414034914037022 Solanum lycopersicum chloroplast
52NC_007943ACTAAT414023714025822 Solanum bulbocastanum chloroplast
53NC_007944ACTAAT414464414466623 Gossypium hirsutum chloroplast
54NC_008096ACTAAT414019014021122 Solanum tuberosum chloroplast
55NC_008115ACTAAT414479214481423 Eucalyptus globulus subsp. globulus chloroplast
56NC_008235ACTAAT414042114044323 Populus alba chloroplast
57NC_008326ACTAAT414438614440823 Liriodendron tulipifera chloroplast
58NC_008334ACTAAT414391814394023 Citrus sinensis chloroplast
59NC_008641ACTAAT414467114469323 Gossypium barbadense chloroplast
60NC_009143ACTAAT414093814096023 Populus trichocarpa chloroplast
61NC_010323ACTAAT414437414439623 Carica papaya chloroplast
62NC_013991ACTAAT414228614230823 Phoenix dactylifera chloroplast
63NC_013707ACTAAT414077814079922 Olea europaea chloroplast
64NC_014569ACTAAT311187811189417Erodium texanum plastid
65NC_015204ACTAAT314457414459017Gossypium thurberi chloroplast
66NC_015605ACTAAT314762914764517Nelumbo lutea chloroplast
67NC_015610ACTAAT314771814773417Nelumbo nucifera chloroplast
68NC_015891ACTAAT315311415313017Spirodela polyrhiza chloroplast
69NC_015894ACTAAT315381615383217Wolffiella lingulata chloroplast
70NC_015899ACTAAT315298915300517Wolffia australiana chloroplast
71NC_016430ACTAAT314207914209517Eleutherococcus senticosus chloroplast
72NC_016668ACTAAT314442814444417Gossypium raimondii chloroplast
73NC_016670ACTAAT314469114470717Gossypium darwinii chloroplast
74NC_016690ACTAAT314474014475617Gossypium tomentosum chloroplast
75NC_016692ACTAAT314462114463717Gossypium herbaceum subsp. africanum chloroplast
76NC_016711ACTAAT314462014463617Gossypium mustelinum chloroplast
77NC_016712ACTAAT314453914455517Gossypium arboreum chloroplast
78NC_016727ACTAAT313739013740617Silene vulgaris chloroplast
79NC_016728ACTAAT313929713931317Silene noctiflora chloroplast
80NC_016729ACTAAT313540413542017Silene conica chloroplast
81NC_016730ACTAAT313755513757117Silene latifolia chloroplast
82NC_016753ACTAAT314662314663917Colocasia esculenta chloroplast
83NC_017894ACTAAT314429614431217Gossypium gossypioides chloroplast
84NC_018109ACTAAT314354614356217Gossypium incanum chloroplast
85NC_018110ACTAAT314387414389017Gossypium somalense chloroplast
86NC_018111ACTAAT314377314378917Gossypium capitis-viridis chloroplast
87NC_018112ACTAAT314390714392317Gossypium areysianum chloroplast
88NC_018113ACTAAT314419214420817Gossypium robinsonii chloroplast
89NC_018357ACTAAT314452214453817Magnolia denudata chloroplast
90NC_018565ACTAAT313927413929017Pachycladon enysii chloroplast
91NC_020019ACTAAT314182414184017Camellia sinensis chloroplast
92NC_020364ACTAAT3513595137618Pseudophoenix vinifera plastid
93NC_020365ACTAAT314128414130017Calamus caryotoides plastid
94NC_021102ACTAAT313885113886717Pachycladon cheesemanii chloroplast
95NC_021423ACTAAT313983913985517Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
96NC_021425ACTAAT314509314510917Tetracentron sinense chloroplast
97NC_021449ACTAAT313739113740717Utricularia gibba chloroplast
98NC_021636ACTAAT3107071072519Glycine tomentella voucher CSIRO:G1403 chloroplast
99NC_021645ACTAAT3105691058719Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
100NC_021646ACTAAT3105471056519Glycine stenophita voucher CSIRO:G1974 chloroplast
101NC_021647ACTAAT3107011071919Glycine canescens voucher CSIRO:G1232 chloroplast
102NC_021648ACTAAT3106931071119Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
103NC_021649ACTAAT3107011071919Glycine falcata voucher CSIRO:G1718 chloroplast
104NC_021650ACTAAT3106951071319Glycine syndetika voucher CSIRO:G1300 chloroplast
105NC_007407ACTAAT313930413932017 Acorus calamus plastid
106NC_007942ACTAAT3106871070519 Glycine max chloroplast
107NC_007944ACTAAT314462414464017 Gossypium hirsutum chloroplast
108NC_007957ACTAAT314532614534217 Vitis vinifera chloroplast
109NC_008336ACTAAT314117614119217 Nandina domestica chloroplast
110NC_008457ACTAAT314487614489217 Piper cenocladum chloroplast
111NC_008535ACTAAT313998514000117 Coffea arabica chloroplast
112NC_008641ACTAAT314465114466717 Gossypium barbadense chloroplast
113NC_009265ACTAAT313850713852317 Aethionema cordifolium chloroplast
114NC_009266ACTAAT313861013862617 Aethionema grandiflorum chloroplast
115NC_009267ACTAAT313909113910717 Olimarabidopsis pumila chloroplast
116NC_009268ACTAAT313803713805317 Arabis hirsuta chloroplast
117NC_009269ACTAAT313888513890117 Barbarea verna chloroplast
118NC_009270ACTAAT313885913887517 Capsella bursa-pastoris chloroplast
119NC_009271ACTAAT313952013953617 Crucihimalaya wallichii chloroplast
120NC_009272ACTAAT313770413772017 Draba nemorosa chloroplast
121NC_009274ACTAAT313698213699817 Lobularia maritima chloroplast
122NC_009275ACTAAT313946613948217 Nasturtium officinale chloroplast
123NC_009598ACTAAT314264514266117 Chloranthus spicatus chloroplast
124NC_009599ACTAAT314344914346517 Buxus microphylla chloroplast
125NC_009600ACTAAT314367914369517 Illicium oligandrum chloroplast
126NC_009601ACTAAT313711613713217 Dioscorea elephantipes chloroplast
127NC_010093ACTAAT313897413899017 Acorus americanus chloroplast
128NC_010109ACTAAT315090815092417 Lemna minor chloroplast
129NC_013823ACTAAT314552914554517 Typha latifolia chloroplast
130NC_014062ACTAAT312933412935219 Anomochloa marantoidea chloroplast
131NC_014062ACTAAT312936912938719 Anomochloa marantoidea chloroplast
132NC_014062ACTAAT312940412942219 Anomochloa marantoidea chloroplast