ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect GA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_009618GA8694256944016 Cycas taitungensis chloroplast
2NC_014675GA7723597237113Isoetes flaccida chloroplast
3NC_016753GA7383553836713Colocasia esculenta chloroplast
4NC_018569GA713924713925913Trebouxiophyceae sp. MX-AZ01 chloroplast
5NC_020147GA7368193683214Ophioglossum californicum chloroplast
6NC_020316GA7495254953814Magnolia officinalis chloroplast
7NC_020317GA7495134952614Magnolia officinalis subsp. biloba voucher SC001 chloroplast
8NC_020318GA7491054911814Magnolia grandiflora voucher NJ016 chloroplast
9NC_021425GA716231916233214Tetracentron sinense chloroplast
10NC_021426GA716368116369414Trochodendron aralioides chloroplast
11NC_008326GA7494934950614 Liriodendron tulipifera chloroplast
12NC_008829GA7354003541314 Angiopteris evecta chloroplast
13NC_009274GA7945779459014 Lobularia maritima chloroplast
14NC_011087GA6426934270412Paulinella chromatophora chromatophore
15NC_011087GA627316627317611Paulinella chromatophora chromatophore
16NC_011087GA675179575180511Paulinella chromatophora chromatophore
17NC_011087GA678208578209511Paulinella chromatophora chromatophore
18NC_014345GA6339683397912Alveolata sp. CCMP3155 chloroplast
19NC_014348GA6173501736011Pteridium aquilinum subsp. aquilinum chloroplast
20NC_014570GA6385253853612Eucalyptus grandis chloroplast
21NC_014573GA611826811827912Geranium palmatum plastid
22NC_014575GA6777467775712Cedrus deodara chloroplast
23NC_014589GA6239102392112Cathaya argyrophylla chloroplast
24NC_014589GA610032810033811Cathaya argyrophylla chloroplast
25NC_014589GA610340210341312Cathaya argyrophylla chloroplast
26NC_014592GA615358215359211Cheilanthes lindheimeri chloroplast
27NC_014674GA6296692967911Castanea mollissima chloroplast
28NC_014675GA6328833289311Isoetes flaccida chloroplast
29NC_014675GA6968739688311Isoetes flaccida chloroplast
30NC_015084GA614779714780812Coccomyxa sp. C-169 plastid
31NC_015113GA6334153342511Anthriscus cerefolium chloroplast
32NC_015402GA6407704078112Ptilidium pulcherrimum chloroplast
33NC_015402GA610590210591211Ptilidium pulcherrimum chloroplast
34NC_015608GA6373413735212Olea woodiana subsp. woodiana chloroplast
35NC_015891GA614468214469211Spirodela polyrhiza chloroplast
36NC_015892GA69235924612Magnolia kwangsiensis chloroplast
37NC_015894GA68968897912Wolffiella lingulata chloroplast
38NC_015894GA6208142082512Wolffiella lingulata chloroplast
39NC_015894GA614536414537411Wolffiella lingulata chloroplast
40NC_015899GA614456714457711Wolffia australiana chloroplast
41NC_016058GA6616886169811Larix decidua chloroplast
42NC_016058GA6997139972412Larix decidua chloroplast
43NC_016063GA6129741298512Cephalotaxus wilsoniana chloroplast DNA
44NC_016063GA6279252793612Cephalotaxus wilsoniana chloroplast DNA
45NC_016063GA6910699107911Cephalotaxus wilsoniana chloroplast DNA
46NC_016064GA68010802112Pseudotsuga sinensis var. wilsoniana chloroplast
47NC_016064GA6936879369711Pseudotsuga sinensis var. wilsoniana chloroplast
48NC_016065GA611258611259611Taiwania cryptomerioides chloroplast DNA
49NC_016069GA6403304034011Picea morrisonicola chloroplast
50NC_016069GA6433644337512Picea morrisonicola chloroplast
51NC_016471GA65488549912Neottia nidus-avis plastid
52NC_016708GA612338712339711Millettia pinnata chloroplast
53NC_016732GA621758821759912Dunaliella salina chloroplast
54NC_016733GA6571415715212Pedinomonas minor chloroplast
55NC_016753GA613808613809611Colocasia esculenta chloroplast
56NC_016986GA69884989512Ginkgo biloba chloroplast
57NC_016986GA6241672417711Ginkgo biloba chloroplast
58NC_017006GA6778797789214Mankyua chejuensis chloroplast
59NC_017602GA68290830112Elaeis guineensis chloroplast
60NC_017602GA613242913243911Elaeis guineensis chloroplast
61NC_017609GA68358836912Phalaenopsis equestris chloroplast
62NC_017609GA6921039211311Phalaenopsis equestris chloroplast
63NC_018114GA68097810812Erycina pusilla chloroplast
64NC_018114GA6508765088611Erycina pusilla chloroplast
65NC_018357GA69255926612Magnolia denudata chloroplast
66NC_018523GA610444710445711Saccharina japonica chloroplast
67NC_018541GA68383839412Elodea canadensis chloroplast
68NC_018541GA6911879119711Elodea canadensis chloroplast
69NC_018541GA610105210106211Elodea canadensis chloroplast
70NC_018565GA610816710817812Pachycladon enysii chloroplast
71NC_018569GA6405704058112Trebouxiophyceae sp. MX-AZ01 chloroplast
72NC_019616GA6378593786911Vaccinium macrocarpon plastid
73NC_020098GA6279742798411Tectona grandis chloroplast
74NC_020152GA6295962960611Quercus rubra plastid
75NC_020316GA69308931912Magnolia officinalis chloroplast
76NC_020317GA69311932212Magnolia officinalis subsp. biloba voucher SC001 chloroplast
77NC_020318GA69256926712Magnolia grandiflora voucher NJ016 chloroplast
78NC_020321GA6696076961812Taxus mairei voucher NN014 chloroplast
79NC_020321GA6944429445211Taxus mairei voucher NN014 chloroplast
80NC_020361GA6412584126811Podocarpus totara chloroplast
81NC_020361GA6656986570811Podocarpus totara chloroplast
82NC_020361GA613223413224512Podocarpus totara chloroplast
83NC_020362GA69148915912Heliconia collinsiana plastid
84NC_020362GA6955789558811Heliconia collinsiana plastid
85NC_020363GA6914409145112Zingiber spectabile plastid
86NC_020364GA613310813311811Pseudophoenix vinifera plastid
87NC_020365GA68230824112Calamus caryotoides plastid
88NC_020365GA613271713272711Calamus caryotoides plastid
89NC_020366GA68563857412Bismarckia nobilis plastid
90NC_020366GA613361813362811Bismarckia nobilis plastid
91NC_020367GA68078808912Dasypogon bromeliifolius plastid
92NC_020367GA6198751988612Dasypogon bromeliifolius plastid
93NC_020367GA6922079221711Dasypogon bromeliifolius plastid
94NC_020371GA6599906000011Pavlova lutheri chloroplast
95NC_020431GA6348323484312Salvia miltiorrhiza chloroplast
96NC_020431GA6555885559912Salvia miltiorrhiza chloroplast
97NC_021101GA6304363044611Francoa sonchifolia plastid
98NC_021110GA6274802749112Cephalotaxus oliveri chloroplast
99NC_021110GA6900089001811Cephalotaxus oliveri chloroplast
100NC_021423GA6273472735711Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
101NC_021429GA68243825412Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
102NC_021429GA6917019171111Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
103NC_021430GA68278828912Cymbidium sinense voucher KUN:YJB100605 chloroplast
104NC_021430GA6909779098711Cymbidium sinense voucher KUN:YJB100605 chloroplast
105NC_021431GA68351836212Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
106NC_021431GA6910339104311Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
107NC_021432GA68122813312Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
108NC_021432GA6909819099111Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
109NC_021433GA68202821312Cymbidium mannii voucher KUN:YJB100602 chloroplast
110NC_021433GA6912829129211Cymbidium mannii voucher KUN:YJB100602 chloroplast
111NC_021438GA67613762412Gnetum montanum chloroplast
112NC_021439GA67951796212Pinus massoniana chloroplast
113NC_021439GA6508175082711Pinus massoniana chloroplast
114NC_021440GA68774878512Pinus taeda chloroplast
115NC_021441GA611147611148611Taiwania flousiana chloroplast
116NC_021455GA6272582726811Prinsepia utilis plastid
117NC_021645GA6284812849212Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
118NC_022136GA6406854069511Lygodium japonicum chloroplast
119NC_000925GA611646811647811 Porphyra purpurea chloroplast
120NC_001631GA67894790512 Pinus thunbergii chloroplast
121NC_001675GA6580485805912 Cyanophora paradoxa cyanelle
122NC_001865GA6213012131212 Chlorella vulgaris chloroplast
123NC_002202GA6312373124711 Spinacia oleracea plastid
124NC_003386GA6929489295912 Psilotum nudum chloroplast
125NC_004115GA6290552906612 Chaetosphaeridium globosum chloroplast
126NC_004115GA6921419215111 Chaetosphaeridium globosum chloroplast
127NC_004543GA62555256511 Anthoceros formosae chloroplast
128NC_004543GA6526235263311 Anthoceros formosae chloroplast
129NC_004677GA67716772712 Pinus koraiensis chloroplast
130NC_004766GA67205721612 Adiantum capillus-veneris chloroplast
131NC_004766GA6539355394612 Adiantum capillus-veneris chloroplast
132NC_004799GA6499564996712 Cyanidioschyzon merolae strain 10D chloroplast
133NC_004993GA68489850012 Calycanthus floridus var. glaucus chloroplast
134NC_005086GA69864987512 Amborella trichopoda chloroplast
135NC_005353GA6591595917012 Chlamydomonas reinhardtii chloroplast
136NC_005878GA6313813139212 Saccharum hybrid cultivar SP-80-3280 chloroplast
137NC_006050GA69794980512 Nymphaea alba chloroplast
138NC_006050GA611385311386311 Nymphaea alba chloroplast
139NC_006084GA611093811094912 Saccharum hybrid cultivar NCo 310 chloroplast
140NC_006137GA6872118722212 Gracilaria tenuistipitata var. liui chloroplast
141NC_006861GA6437504376112 Huperzia lucidula chloroplast
142NC_006861GA6741747418411 Huperzia lucidula chloroplast
143NC_006861GA6753457535612 Huperzia lucidula chloroplast
144NC_006861GA6788847889411 Huperzia lucidula chloroplast
145NC_007144GA6495874959812 Cucumis sativus chloroplast
146NC_007407GA68160817112 Acorus calamus plastid
147NC_007499GA68357836812 Phalaenopsis aphrodite subsp. formosana chloroplast
148NC_007499GA6920919210111 Phalaenopsis aphrodite subsp. formosana chloroplast
149NC_008097GA6915909160112 Chara vulgaris chloroplast
150NC_008099GA6570155702612 Oltmannsiellopsis viridis chloroplast
151NC_008101GA615065915067012 Scenedesmus obliquus chloroplast
152NC_008114GA615668715669812 Pseudendoclonium akinetum chloroplast
153NC_008115GA6386563866712 Eucalyptus globulus subsp. globulus chloroplast
154NC_008117GA6680016801212 Zygnema circumcarinatum chloroplast
155NC_008289GA6371703718011 Ostreococcus tauri chloroplast
156NC_008325GA6327933280311 Daucus carota chloroplast
157NC_008325GA612483012484112 Daucus carota chloroplast
158NC_008326GA69305931612 Liriodendron tulipifera chloroplast
159NC_008336GA610946010947011 Nandina domestica chloroplast
160NC_008359GA6373763738712 Morus indica chloroplast
161NC_008372GA611934811935912 Stigeoclonium helveticum chloroplast
162NC_008407GA67799781012 Jasminum nudiflorum chloroplast
163NC_008591GA610811210812312 Agrostis stolonifera chloroplast
164NC_008602GA611104411105512 Sorghum bicolor chloroplast
165NC_008788GA69555956612 Nuphar advena chloroplast
166NC_008788GA611460011461011 Nuphar advena chloroplast
167NC_008829GA614280114281111 Angiopteris evecta chloroplast
168NC_009259GA610562010563011 Phaseolus vulgaris chloroplast
169NC_009598GA68720873112 Chloranthus spicatus chloroplast
170NC_009599GA6284662847611 Buxus microphylla chloroplast
171NC_009600GA69604961512 Illicium oligandrum chloroplast
172NC_009601GA6883178832711 Dioscorea elephantipes chloroplast
173NC_009601GA612866312867311 Dioscorea elephantipes chloroplast
174NC_009618GA63458346912 Cycas taitungensis chloroplast
175NC_009618GA69513952412 Cycas taitungensis chloroplast
176NC_009962GA68383839412 Ceratophyllum demersum chloroplast
177NC_010093GA67836784712 Acorus americanus chloroplast
178NC_010109GA68614862512 Lemna minor chloroplast
179NC_010109GA6205592057012 Lemna minor chloroplast
180NC_010109GA6386283863912 Lemna minor chloroplast
181NC_010109GA614253214254211 Lemna minor chloroplast
182NC_010323GA6376063761712 Carica papaya chloroplast
183NC_010548GA6724917250212 Cryptomeria japonica chloroplast
184NC_010548GA6826998271012 Cryptomeria japonica chloroplast
185NC_010654GA68397840812 Welwitschia mirabilis chloroplast
186NC_011152GA67999801012 Picea sitchensis chloroplast
187NC_011152GA6346963470611 Picea sitchensis chloroplast
188NC_011153GA67979799012 Pinus contorta chloroplast
189NC_011154GA67823783412 Pinus gerardiana chloroplast
190NC_011155GA67806781712 Pinus krempfii chloroplast
191NC_011156GA67803781412 Pinus lambertiana chloroplast
192NC_011158GA67760777112 Pinus monophylla chloroplast
193NC_011159GA67620763112 Pinus nelsonii chloroplast
194NC_011930GA6486974870812 Keteleeria davidiana chloroplast
195NC_011942GA6887238873412 Gnetum parvifolium chloroplast
196NC_012615GA6790437905311 Megaleranthis saniculifolia chloroplast
197NC_012615GA611262411263411 Megaleranthis saniculifolia chloroplast
198NC_012818GA6946709468011 Alsophila spinulosa chloroplast
199NC_012818GA612081912082911 Alsophila spinulosa chloroplast
200NC_012898GA6283182832912 Aureococcus anophagefferens chloroplast
201NC_013086GA6856648567411 Selaginella moellendorffii plastid
202NC_013273GA611057911059012 Coix lacryma-jobi chloroplast
203NC_013359GA611564911565911 Bryopsis hypnoides chloroplast
204NC_013823GA6951229513211 Typha latifolia chloroplast
205NC_013823GA613691013692011 Typha latifolia chloroplast
206NC_013991GA68343835412 Phoenix dactylifera chloroplast
207NC_013991GA613373013374011 Phoenix dactylifera chloroplast
208NC_014056GA68071808212 Oncidium Gower Ramsey chloroplast
209NC_014056GA6495534956311 Oncidium Gower Ramsey chloroplast
210NC_014057GA6406044061512 Pisum sativum chloroplast