Chloroplast Motifs - Imperfect TTGT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | TTGT | 8 | 47053 | 47084 | 32 | Zygnema circumcarinatum chloroplast |
2 | NC_015894 | TTGT | 4 | 72080 | 72095 | 16 | Wolffiella lingulata chloroplast |
3 | NC_008335 | TTGT | 4 | 5200 | 5215 | 16 | Platanus occidentalis chloroplast |
4 | NC_014287 | TTGT | 3 | 90047 | 90058 | 12 | Durinskia baltica chloroplast |
5 | NC_014346 | TTGT | 3 | 194316 | 194326 | 11 | Floydiella terrestris chloroplast |
6 | NC_014346 | TTGT | 3 | 288344 | 288355 | 12 | Floydiella terrestris chloroplast |
7 | NC_014569 | TTGT | 3 | 124114 | 124125 | 12 | Erodium texanum plastid |
8 | NC_015084 | TTGT | 3 | 78491 | 78502 | 12 | Coccomyxa sp. C-169 plastid |
9 | NC_015113 | TTGT | 3 | 28086 | 28096 | 11 | Anthriscus cerefolium chloroplast |
10 | NC_015204 | TTGT | 3 | 117762 | 117773 | 12 | Gossypium thurberi chloroplast |
11 | NC_015403 | TTGT | 3 | 95490 | 95501 | 12 | Fistulifera sp. JPCC DA0580 chloroplast |
12 | NC_015645 | TTGT | 3 | 25156 | 25166 | 11 | Schizomeris leibleinii chloroplast |
13 | NC_015891 | TTGT | 3 | 123089 | 123100 | 12 | Spirodela polyrhiza chloroplast |
14 | NC_015899 | TTGT | 3 | 125575 | 125585 | 11 | Wolffia australiana chloroplast |
15 | NC_015983 | TTGT | 3 | 91109 | 91120 | 12 | Cucumis melo subsp. melo chloroplast |
16 | NC_016063 | TTGT | 3 | 13023 | 13034 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
17 | NC_016069 | TTGT | 3 | 81266 | 81277 | 12 | Picea morrisonicola chloroplast |
18 | NC_016471 | TTGT | 3 | 49709 | 49720 | 12 | Neottia nidus-avis plastid |
19 | NC_016732 | TTGT | 3 | 129075 | 129085 | 11 | Dunaliella salina chloroplast |
20 | NC_016732 | TTGT | 3 | 170794 | 170805 | 12 | Dunaliella salina chloroplast |
21 | NC_016732 | TTGT | 3 | 268428 | 268440 | 13 | Dunaliella salina chloroplast |
22 | NC_016733 | TTGT | 3 | 44709 | 44719 | 11 | Pedinomonas minor chloroplast |
23 | NC_018523 | TTGT | 3 | 14443 | 14454 | 12 | Saccharina japonica chloroplast |
24 | NC_018541 | TTGT | 3 | 36383 | 36394 | 12 | Elodea canadensis chloroplast |
25 | NC_018565 | TTGT | 3 | 46438 | 46449 | 12 | Pachycladon enysii chloroplast |
26 | NC_019616 | TTGT | 3 | 32450 | 32461 | 12 | Vaccinium macrocarpon plastid |
27 | NC_019616 | TTGT | 3 | 174240 | 174251 | 12 | Vaccinium macrocarpon plastid |
28 | NC_019649 | TTGT | 3 | 61313 | 61324 | 12 | Festuca ovina plastid |
29 | NC_020014 | TTGT | 3 | 21276 | 21286 | 11 | Nannochloropsis gaditana chloroplast |
30 | NC_020363 | TTGT | 3 | 98342 | 98353 | 12 | Zingiber spectabile plastid |
31 | NC_020431 | TTGT | 3 | 67192 | 67202 | 11 | Salvia miltiorrhiza chloroplast |
32 | NC_020438 | TTGT | 3 | 30140 | 30151 | 12 | Gonium pectorale chloroplast |
33 | NC_021102 | TTGT | 3 | 45980 | 45991 | 12 | Pachycladon cheesemanii chloroplast |
34 | NC_021109 | TTGT | 3 | 164081 | 164091 | 11 | Pleodorina starrii plastid |
35 | NC_021110 | TTGT | 3 | 12922 | 12933 | 12 | Cephalotaxus oliveri chloroplast |
36 | NC_021189 | TTGT | 3 | 190126 | 190137 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
37 | NC_021437 | TTGT | 3 | 89321 | 89332 | 12 | Cunninghamia lanceolata chloroplast |
38 | NC_021618 | TTGT | 3 | 124265 | 124275 | 11 | Grateloupia taiwanensis plastid |
39 | NC_021760 | TTGT | 3 | 63262 | 63274 | 13 | Triticum monococcum chloroplast |
40 | NC_021761 | TTGT | 3 | 63007 | 63019 | 13 | Secale cereale chloroplast |
41 | NC_021762 | TTGT | 3 | 62942 | 62954 | 13 | Triticum urartu chloroplast |
42 | NC_022133 | TTGT | 3 | 62072 | 62084 | 13 | Aegilops tauschii chloroplast |
43 | NC_001568 | TTGT | 3 | 60907 | 60918 | 12 | Epifagus virginiana chloroplast |
44 | NC_001603 | TTGT | 3 | 17793 | 17803 | 11 | Euglena gracilis chloroplast |
45 | NC_002186 | TTGT | 3 | 79408 | 79419 | 12 | Mesostigma viride chloroplast |
46 | NC_002652 | TTGT | 3 | 8332 | 8343 | 12 | Euglena longa plastid |
47 | NC_002762 | TTGT | 3 | 62645 | 62657 | 13 | Triticum aestivum chloroplast |
48 | NC_003386 | TTGT | 3 | 53011 | 53021 | 11 | Psilotum nudum chloroplast |
49 | NC_004115 | TTGT | 3 | 85902 | 85913 | 12 | Chaetosphaeridium globosum chloroplast |
50 | NC_004543 | TTGT | 3 | 140053 | 140064 | 12 | Anthoceros formosae chloroplast |
51 | NC_005087 | TTGT | 3 | 56669 | 56679 | 11 | Physcomitrella patens subsp. patens chloroplast |
52 | NC_006861 | TTGT | 3 | 33448 | 33460 | 13 | Huperzia lucidula chloroplast |
53 | NC_007144 | TTGT | 3 | 90572 | 90583 | 12 | Cucumis sativus chloroplast |
54 | NC_007407 | TTGT | 3 | 58403 | 58413 | 11 | Acorus calamus plastid |
55 | NC_007932 | TTGT | 3 | 186479 | 186490 | 12 | Porphyra yezoensis chloroplast |
56 | NC_007957 | TTGT | 3 | 119324 | 119334 | 11 | Vitis vinifera chloroplast |
57 | NC_008099 | TTGT | 3 | 111894 | 111905 | 12 | Oltmannsiellopsis viridis chloroplast |
58 | NC_008100 | TTGT | 3 | 25982 | 25993 | 12 | Helicosporidium sp. ex Simulium jonesii plastid |
59 | NC_008101 | TTGT | 3 | 101511 | 101521 | 11 | Scenedesmus obliquus chloroplast |
60 | NC_008101 | TTGT | 3 | 145103 | 145113 | 11 | Scenedesmus obliquus chloroplast |
61 | NC_008117 | TTGT | 3 | 114127 | 114138 | 12 | Zygnema circumcarinatum chloroplast |
62 | NC_008334 | TTGT | 3 | 48076 | 48086 | 11 | Citrus sinensis chloroplast |
63 | NC_008372 | TTGT | 3 | 98625 | 98636 | 12 | Stigeoclonium helveticum chloroplast |
64 | NC_008407 | TTGT | 3 | 80166 | 80177 | 12 | Jasminum nudiflorum chloroplast |
65 | NC_008457 | TTGT | 3 | 18839 | 18850 | 12 | Piper cenocladum chloroplast |
66 | NC_008535 | TTGT | 3 | 71588 | 71599 | 12 | Coffea arabica chloroplast |
67 | NC_008589 | TTGT | 3 | 89278 | 89289 | 12 | Thalassiosira pseudonana chloroplast |
68 | NC_008641 | TTGT | 3 | 117858 | 117869 | 12 | Gossypium barbadense chloroplast |
69 | NC_009259 | TTGT | 3 | 93182 | 93193 | 12 | Phaseolus vulgaris chloroplast |
70 | NC_009271 | TTGT | 3 | 46197 | 46208 | 12 | Crucihimalaya wallichii chloroplast |
71 | NC_009271 | TTGT | 3 | 79283 | 79294 | 12 | Crucihimalaya wallichii chloroplast |
72 | NC_009273 | TTGT | 3 | 11452 | 11462 | 11 | Lepidium virginicum chloroplast |
73 | NC_009273 | TTGT | 3 | 46235 | 46246 | 12 | Lepidium virginicum chloroplast |
74 | NC_009573 | TTGT | 3 | 30295 | 30305 | 11 | Rhodomonas salina chloroplast |
75 | NC_009599 | TTGT | 3 | 4796 | 4807 | 12 | Buxus microphylla chloroplast |
76 | NC_009601 | TTGT | 3 | 29197 | 29207 | 11 | Dioscorea elephantipes chloroplast |
77 | NC_009808 | TTGT | 3 | 6643 | 6654 | 12 | Ipomoea purpurea chloroplast |
78 | NC_010093 | TTGT | 3 | 58080 | 58090 | 11 | Acorus americanus chloroplast |
79 | NC_010433 | TTGT | 3 | 86955 | 86965 | 11 | Manihot esculenta chloroplast |
80 | NC_011152 | TTGT | 3 | 39235 | 39246 | 12 | Picea sitchensis chloroplast |
81 | NC_011942 | TTGT | 3 | 78135 | 78147 | 13 | Gnetum parvifolium chloroplast |
82 | NC_012052 | TTGT | 3 | 47711 | 47722 | 12 | Syntrichia ruralis chloroplast |
83 | NC_012224 | TTGT | 3 | 96463 | 96474 | 12 | Jatropha curcas chloroplast |
84 | NC_012575 | TTGT | 3 | 25620 | 25630 | 11 | Micromonas sp. RCC299 chloroplast |
85 | NC_012575 | TTGT | 3 | 35312 | 35323 | 12 | Micromonas sp. RCC299 chloroplast |
86 | NC_012615 | TTGT | 3 | 48268 | 48278 | 11 | Megaleranthis saniculifolia chloroplast |
87 | NC_012818 | TTGT | 3 | 58864 | 58875 | 12 | Alsophila spinulosa chloroplast |
88 | NC_013359 | TTGT | 3 | 116836 | 116846 | 11 | Bryopsis hypnoides chloroplast |
89 | NC_013498 | TTGT | 3 | 69112 | 69123 | 12 | Ectocarpus siliculosus chloroplast |
90 | NC_013553 | TTGT | 3 | 65218 | 65228 | 11 | Parthenium argentatum chloroplast |
91 | NC_013553 | TTGT | 3 | 123616 | 123627 | 12 | Parthenium argentatum chloroplast |
92 | NC_013823 | TTGT | 3 | 54794 | 54804 | 11 | Typha latifolia chloroplast |