ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Repeats of Alsophila spinulosa chloroplast

Click on Table Heading To Sort Results Accordingly

S.No.	Genome ID	SSR	SSR Type	Start	End	Tract Length	Primer Design
1	NC_012818	(A)13	p1	3443	3455	13	Design Primer
2	NC_012818	(G)14	p1	6799	6812	14	Design Primer
3	NC_012818	(TA)6	p2	7529	7540	12	Design Primer
4	NC_012818	(C)12tccttaaaagagaagaaggagatagaataaagagaattgaatcctgaatcaatctcttaggtataaattaatcctcccgagacagactca(AT)8	c	8126	8243	118	Design Primer
5	NC_012818	(C)13	p1	9680	9692	13	Design Primer
6	NC_012818	(T)12	p1	15000	15011	12	Design Primer
7	NC_012818	(T)13	p1	22281	22293	13	Design Primer
8	NC_012818	(AAG)4	p3	22472	22483	12	Design Primer
9	NC_012818	(A)12	p1	28198	28209	12	Design Primer
10	NC_012818	(A)12	p1	29362	29373	12	Design Primer
11	NC_012818	(AT)9	p2	30354	30371	18	Design Primer
12	NC_012818	(G)12tagggggctgattcaatctaatcaattaatactgtcgttgaacctacttgcgcgtattttgaaagaagt(A)13	c	31694	31787	94	Design Primer
13	NC_012818	(A)12ttattccttaaaagaatcatccgatagtatctagtatccttcaggtacccagcgataac(T)13	c	32989	33072	84	Design Primer
14	NC_012818	(ATCT)4aa(ATAG)3	c	33593	33622	30	Design Primer
15	NC_012818	(T)19	p1	37265	37283	19	Design Primer
16	NC_012818	(T)12	p1	44223	44234	12	Design Primer
17	NC_012818	(T)15	p1	45718	45732	15	Design Primer
18	NC_012818	(T)12	p1	45844	45855	12	Design Primer
19	NC_012818	(A)14	p1	48335	48348	14	Design Primer
20	NC_012818	(T)13	p1	48937	48949	13	Design Primer
21	NC_012818	(AT)7	p2	52234	52247	14	Design Primer
22	NC_012818	(T)13	p1	54704	54716	13	Design Primer
23	NC_012818	(T)12	p1	56549	56560	12	Design Primer
24	NC_012818	(T)19	p1	56970	56988	19	Design Primer
25	NC_012818	(TATT)3	p4	58017	58028	12	Design Primer
26	NC_012818	(T)13	p1	63154	63166	13	Design Primer
27	NC_012818	(T)17	p1	67329	67345	17	Design Primer
28	NC_012818	(T)12	p1	68303	68314	12	Design Primer
29	NC_012818	(TATC)3catatg(GATA)3	c	69219	69248	30	Design Primer
30	NC_012818	(C)17	p1	69754	69770	17	Design Primer
31	NC_012818	(AT)12	p2	70624	70647	24	Design Primer
32	NC_012818	(T)16	p1	74415	74430	16	Design Primer
33	NC_012818	(T)13actacactaataaggagta(AT)9gttatttttgtcaaacatagtggggttgggccctaaaaaaagttctgtcatatctatttgtttcct(A)14(TA)6gatagata(T)12	c	80161	80322	162	Design Primer
34	NC_012818	(T)12	p1	81897	81908	12	Design Primer
35	NC_012818	(CCTC)3	p4	82063	82074	12	Design Primer
36	NC_012818	(T)13	p1	82236	82248	13	Design Primer
37	NC_012818	(A)15	p1	84665	84679	15	Design Primer
38	NC_012818	(A)12	p1	85654	85665	12	Design Primer
39	NC_012818	(T)13	p1	85967	85979	13	Design Primer
40	NC_012818	(AT)6	p2	87991	88002	12	Design Primer
41	NC_012818	(AT)6	p2	88446	88457	12	Design Primer
42	NC_012818	(T)13	p1	89893	89905	13	Design Primer
43	NC_012818	(TCTT)3	p4	97952	97963	12	Design Primer
44	NC_012818	(A)12	p1	103023	103034	12	Design Primer
45	NC_012818	(AGAA)3	p4	108199	108210	12	Design Primer
46	NC_012818	(A)23	p1	109609	109631	23	Design Primer
47	NC_012818	(G)15	p1	110408	110422	15	Design Primer
48	NC_012818	(A)13(AT)8*	c*	113692	113719	28	Design Primer
49	NC_012818	(T)13	p1	114378	114390	13	Design Primer
50	NC_012818	(A)13	p1	114717	114729	13	Design Primer
51	NC_012818	(T)12	p1	114956	114967	12	Design Primer
52	NC_012818	(T)12	p1	118124	118135	12	Design Primer
53	NC_012818	(G)13	p1	118671	118683	13	Design Primer
54	NC_012818	(TA)7tct(A)13(AT)10*	c*	120486	120534	49	Design Primer
55	NC_012818	(A)14	p1	124291	124304	14	Design Primer
56	NC_012818	(ACCA)3	p4	129075	129086	12	Design Primer
57	NC_012818	(C)13	p1	129616	129628	13	Design Primer
58	NC_012818	(C)15	p1	132548	132562	15	Design Primer
59	NC_012818	(T)23	p1	133339	133361	23	Design Primer
60	NC_012818	(TTTC)3	p4	134759	134770	12	Design Primer
61	NC_012818	(T)12	p1	139936	139947	12	Design Primer
62	NC_012818	(AAAG)3	p4	145006	145017	12	Design Primer
63	NC_012818	(A)13	p1	153065	153077	13	Design Primer
64	NC_012818	(AT)6	p2	154513	154524	12	Design Primer
65	NC_012818	(AT)6	p2	154968	154979	12	Design Primer

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Repeats of Alsophila spinulosa chloroplast