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ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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All Repeats of Castanea mollissima chloroplast

Click on Table Heading To Sort Results Accordingly
S.No.Genome IDSSRSSR TypeStartEndTract LengthPrimer Design
1NC_014674(TAAA)4p421923416Design Primer
2NC_014674(AAATAG)3p61627164418Design Primer
3NC_014674(TTCA)3(A)12*c*1761178323Design Primer
4NC_014674(T)10p14088409710Design Primer
5NC_014674(C)12p14392440312Design Primer
6NC_014674(AAAT)3(AATA)3c4661468424Design Primer
7NC_014674(A)10p14882489110Design Primer
8NC_014674(A)12p15081509212Design Primer
9NC_014674(A)10p17106711510Design Primer
10NC_014674(AT)6p27395740612Design Primer
11NC_014674(A)11p18031804111Design Primer
12NC_014674(A)12p18448845912Design Primer
13NC_014674(A)10p18783879210Design Primer
14NC_014674(A)12p19644965512Design Primer
15NC_014674(A)11tgattaatgattgttgttgtttcaagaacaatcataataaaggcaatttctattcctatcatac(AGAAT)3ccgagtgtcatttcttaattattttattctttctttttttttattccagtaaagtaaaaagtaaatggaat(A)11c1005610227172Design Primer
16NC_014674(C)10p1110381104710Design Primer
17NC_014674(T)10gaatataatgaacctatcctctcttctctattcatatttcatattc(A)13tatcaaaatggatcattaatccaagaccagaatattcggaggactcttctgaacaaacaaataattgtcagcaacgttgtttc(T)11caaatccaaaaaatttttattaatttatacgtaggtcatcgattcagcattggataaaaaagaggggttgaaatactcataatttttttccaataaat(AATA)3c1404414316273Design Primer
18NC_014674(T)11p1152801529011Design Primer
19NC_014674(A)15p1186171863115Design Primer
20NC_014674(T)10p1205922060110Design Primer
21NC_014674(T)10p1207212073010Design Primer
22NC_014674(T)12p1212492126012Design Primer
23NC_014674(C)13(A)10c247892481123Design Primer
24NC_014674(T)13p1252612527313Design Primer
25NC_014674(T)10p1285242853310Design Primer
26NC_014674(T)10p1296122962110Design Primer
27NC_014674(T)10caatattgtgtttgttttaagatactatacaaacaatcgaagatatatatccaatccaaagagaaaggtaagtattta(T)10aggaaaggggattattaaataaaagaggattccagatacaagtacaaaaacgaatat(C)10c3023230396165Design Primer
28NC_014674(T)11p1316863169611Design Primer
29NC_014674(AAAT)3p4336883369912Design Primer
30NC_014674(A)11p1340993410911Design Primer
31NC_014674(A)12p1350883509912Design Primer
32NC_014674(A)10p1355693557810Design Primer
33NC_014674(TAA)4p3359123592312Design Primer
34NC_014674(A)16p1366333664816Design Primer
35NC_014674(AT)10p2399703998920Design Primer
36NC_014674(A)10p1402784028710Design Primer
37NC_014674(A)10tgaaagggaggggtcaaacaaacttcttatatttaactatttaaaaatgaaattaaaaa(AT)6taattaaataattttattatactatttatttatatttataata(TAT)4atattattatttataaatagtagaaattttctataatatttataatactattttgataataatatttttttgataataacttatt(TTA)4c4079241024233Design Primer
38NC_014674(A)10p1517075171610Design Primer
39NC_014674(A)12tgaaaaagagaaggccgtaatccagatcataatgaaagattcctccgctttcgttcggaaagataaaacc(A)11c522265231893Design Primer
40NC_014674(TTTA)3p4529925300312Design Primer
41NC_014674(T)13p1533305334213Design Primer
42NC_014674(T)12atttatcctttttatttctattttttattgtttctatttttatatattata(TATT)3c542295430375Design Primer
43NC_014674(A)15p1551135512715Design Primer
44NC_014674(T)11p1558405585011Design Primer
45NC_014674(T)10p1597235973210Design Primer
46NC_014674(T)10p1601956020410Design Primer
47NC_014674(T)10p1642156422410Design Primer
48NC_014674(A)12p1643896440012Design Primer
49NC_014674(AT)7p2646946470714Design Primer
50NC_014674(T)15p1650696508315Design Primer
51NC_014674(T)10p1661146612310Design Primer
52NC_014674(T)12p1662926630312Design Primer
53NC_014674(T)11p1687376874711Design Primer
54NC_014674(A)13tagagtaaggttttattagtatagaaaaaattttcatgatatctgatcaatagaa(AT)7c691496923082Design Primer
55NC_014674(C)11p1708417085111Design Primer
56NC_014674(T)10p1715187152710Design Primer
57NC_014674(TTAA)3p4720797209012Design Primer
58NC_014674(ATTA)3p4726837269412Design Primer
59NC_014674(T)13p1734887350013Design Primer
60NC_014674(A)15p1767197673315Design Primer
61NC_014674(A)10gaatcaatgtgtagattgcagccctcattc(T)11c772257727551Design Primer
62NC_014674(TAT)4p3784157842612Design Primer
63NC_014674(TA)7p2830178303014Design Primer
64NC_014674(A)10p1858468585510Design Primer
65NC_014674(T)12p1860978610812Design Primer
66NC_014674(T)14atttgctctttcactgcgaaggggctaagtaaaaaaagaaatattgtttgtccaaaac(A)10gaaacctataattttg(T)11c8712087228109Design Primer
67NC_014674(ATA)4p3879628797312Design Primer
68NC_014674(T)10p1904529046110Design Primer
69NC_014674(GCAAT)3p510540710542115Design Primer
70NC_014674(T)15p111392711394115Design Primer
71NC_014674(T)10p111642011642910Design Primer
72NC_014674(T)16p111690911692416Design Primer
73NC_014674(T)22p111844111846222Design Primer
74NC_014674(A)12t(A)11c11871611873924Design Primer
75NC_014674(AAAT)4p411947211948716Design Primer
76NC_014674(A)11p111963111964111Design Primer
77NC_014674(T)11(TTTTA)3*c*12575212577322Design Primer
78NC_014674(A)11gaaaaaaaagaaattgtattctttcta(T)11cgttcctattcttctttcttttctg(A)10c12722812731184Design Primer
79NC_014674(TCT)4p312766512767612Design Primer
80NC_014674(T)12p113006313007412Design Primer
81NC_014674(A)10p113028913029810Design Primer
82NC_014674(AAT)4p313309613310712Design Primer
83NC_014674(T)10p113326113327010Design Primer
84NC_014674(T)13p113383813385013Design Primer
85NC_014674(ATT)4p313470613471712Design Primer
86NC_014674(A)15p113729113730515Design Primer
87NC_014674(CATTG)3p514581014582415Design Primer
88NC_014674(A)10p116077116078010Design Primer