ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Perfect Repeat Motifs of Chloroplast Genomes

Click on the motif to get repeats
G	T	C	A	AG	CT	AC	GT	CA	TG	AT	TA	TC	GA
CAC	GTG	CGC	AGC	ACG	TCA	ACC	GGT	AGG	GTA	GAC	GCT	GTT	TTC
CTC	GCG	CCG	CTT	CAG	TTG	CGT	CAA	AAG	AAT	TAT	AGA	TGT	CTA
CCA	ATA	TCT	TAG	GGC	AAC	GCA	CGG	TAA	TCC	ACT	TAC	GAA	GAG
CCT	CTG	CAT	ATG	AGT	ACA	TTA	TGA	GGA	GAT	TGG	TGC	GGTT	GTTT
GTCT	AGCC	TGTT	ATTA	TGAA	TGGA	CTCG	TTAC	TCGA	AATG	TGGG	GTGG	CCAA	TTGG
AGTA	ATCT	TCCA	TGTA	GCCC	TTTA	TATT	TGTC	CCCA	ATTG	AACT	CGAG	GATT	ACAA
TTCA	TCAT	ACAT	TCCC	TCTG	TGCC	TTCT	GATG	TCTT	ATCC	CTTC	ATAA	ACTT	GTAT
TTTG	TTTC	GAAA	ATCA	AATC	TGCA	AGTT	AAAC	GATA	TGGT	CTTT	AAAT	ATAC	TATG
CAAA	GGAG	ACCC	GCCT	GAAT	ATTT	AGAT	ACTA	ACCA	ATAG	TCCT	CTGC	ATGA	GGGA
TACT	TAGT	GAAG	CTAA	CCGA	CTTA	CCAT	ATGG	AACC	CTTG	TAGG	CTAT	TAAC	GGAT
TTGT	TACA	AGCA	AGGC	CAAT	TAAA	TCTA	AACA	GAGG	AGGA	AATA	TAAG	AACG	GGAA
GAGT	AGGT	TTGA	TAGA	AGAA	TTCC	CATA	TCAA	TTAA	TCGT	CCCT	GTTG	GCGG	AAGG
TTAG	TCAG	AATT	ATTC	CCTC	TAAT	ATGT	AGGG	CGGG	TTGC	TCGG	CAAC	TTAT	AGAC
AAAG	CTAC	AAGA	TATC	CAGG	TAGAA	CTATT	GAGGT	ATAAG	GAAAG	ATCAA	TACCA	AATTT	TTTGA
TTTTC	ACCGA	CAATC	GTTTA	ATCTT	TGCAT	CAATG	AGTTA	TGAAT	GGAAA	CTTTT	ATGAA	TTAAT	TCACC
ATACT	TCATT	CTAAT	AACTA	TGAGA	AATAT	TTAAG	CAGAA	AGAGA	TTCCC	TAAAA	TAGTA	AAAGT	ATACA
TTAAA	AAATC	AAAAT	TTTAT	AAGAG	ATATT	AATGA	ATAGA	TTTCA	TTCTG	CTCTT	AGAAT	AAAGA	TATTC
ATTGA	AATCA	ATTCT	TTATC	TATAG	AATTG	ATCTA	TATCC	TAATG	GCAAT	TGTTT	TAATT	ATTCA	AATTA
TAGGT	ACTAT	CAATT	AAATT	ATTAA	AGAAA	GAAAA	TCTTG	ATTAC	ATCCT	TGAAA	TATAA	TATTG	TATTT
TTTTA	AAGCA	TTTTG	TCAAA	TATAT	CAAAA	TCATA	CAAAT	GACCG	TCTTT	TAAAT	TTGAT	TCCTA	AAATA
AAGGA	AATAA	TAAAG	CCAAT	CAATA	ATGGT	CATTG	AAGAA	TTAGA	TAAAC	ATTTA	AGATA	ATTAG	TCCGT
TTTCT	CCATA	ACTTA	TTTGT	TAAGA	CCAAC	GAATA	TTTAG	CTTCT	CTTTA	TCTAT	ACTTT	ATAAA	ACGGA
AGAGT	ATATA	ATGTA	TTATA	CCTTC	AATAG	ATACC	TTTAA	ATTTT	TTCTT	TAATA	CTTAT	TATGA	TGGCC
AAACA	ACTTCT	AAATAA	CTCTTC	CATAGT	CAATAT	GGTTCG	AATTTG	GAAAAA	TAGAAA	TAAATT	ACGTAA	ATTCAG	AGCCAC
TAAAAA	AATTAT	TTCATT	TCTTCC	GCGACG	TTTTTG	TCATTC	GGAGTG	TTATAG	AATTGA	TTTAAA	TTAATT	GAATTT	TCAAAT
TCTTCA	ATAGAA	ATTCAT	ATTACT	TACATA	ATATTT	GGTTCC	TTTATA	TCTTTT	CTAATA	CATCCT	TAGGGA	TGTTTT	AAAAGG
TTAACG	TGGAGT	ATAACA	TCCTTA	ATTTTA	GTTGGT	CTATAA	AGTCGA	CCGGAA	AAGCAA	TCTATC	TATTAG	TGACGA	TCTTAT
TATAGA	GAGGAA	TCATAT	TTTTCT	CAAGCC	TTTTTC	TATTTT	ATCCAA	CGTTAA	TCTATT	TTTTAT	GAAGTC	CAAGAT	GAAAAG
ATTGAT	AGAATG	ATTTAG	CATTTT	TTTCTA	AATGAT	TAGAGC	CAAAAA	ATATGA	TAAAAT	ATTCTA	CAGGAA	ACTAAT	TCCAAC
TTAAAC	AGTAGA	ATTAGT	ATAGAT	ATCAAT	GAATAA	GAATAG	TGAATT	TCATTT	TATGTA	CTCTTG	CTATAT	ATAAAT	ATTAAT
TTCTAT	ATCTAT	TTTTTA	TCCTCT	AAGTTT	AGTTGG	AAAAAT	TATAGT	TCAAAA	AAAAAG	TTATAA	TTAATA	AGAAAA	TTTCAT
AAATAG	TTTTGA	TTTTAA	TATAAG	ATATAA	TCTGAA	AATATA	ATATCT	AAAACA	GTAAGA	CATTCT	AAAGAG	TATTGA	CTTATT
CTTATC	CCTCTT	GTATTA	AAAATA	TTATAT	AGGGGA	TAGTAA	TTACCT	CTGCCG	AGGAAA	TCTGGT	CTATTA	AGAAGT	GTTGCG
TAGAAT	ATCGTC	TCCCCA	ATTTTC	GTGAAA	TATGTT	TATATT	GATAAA	CCAATG	AGTAAT	CTACCT	ATCTGA	ATTTTG	GGATAA
AGAGAA	TTTCAC	AAAAGA	TCCTTC	AAAATT	GATATT	GAGCAG	GAGAAT	TTAGTA	TTTACT	ATCTTT	CCGTCG	AAAGAA	TTTCTT
GTGATG	AAGTAC	CAATGG	AAGAAC	-	-	-	-	-	-	-	-	-	-

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Perfect Repeat Motifs of Chloroplast Genomes