Chloroplast Motifs - Perfect TAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014675 | TAA | 8 | 5575 | 5598 | 24 | Isoetes flaccida chloroplast |
2 | NC_004543 | TAA | 7 | 62057 | 62077 | 21 | Anthoceros formosae chloroplast |
3 | NC_021426 | TAA | 6 | 5011 | 5028 | 18 | Trochodendron aralioides chloroplast |
4 | NC_021426 | TAA | 6 | 5209 | 5226 | 18 | Trochodendron aralioides chloroplast |
5 | NC_002186 | TAA | 6 | 65569 | 65586 | 18 | Mesostigma viride chloroplast |
6 | NC_004543 | TAA | 6 | 129068 | 129085 | 18 | Anthoceros formosae chloroplast |
7 | NC_013991 | TAA | 6 | 120490 | 120507 | 18 | Phoenix dactylifera chloroplast |
8 | NC_011087 | TAA | 5 | 971193 | 971207 | 15 | Paulinella chromatophora chromatophore |
9 | NC_014582 | TAA | 5 | 47517 | 47531 | 15 | Monsonia speciosa plastid |
10 | NC_014675 | TAA | 5 | 50940 | 50954 | 15 | Isoetes flaccida chloroplast |
11 | NC_015645 | TAA | 5 | 160259 | 160273 | 15 | Schizomeris leibleinii chloroplast |
12 | NC_015894 | TAA | 5 | 17235 | 17249 | 15 | Wolffiella lingulata chloroplast |
13 | NC_020320 | TAA | 5 | 58563 | 58577 | 15 | Chrysanthemum indicum voucher HeN001 chloroplast |
14 | NC_001603 | TAA | 5 | 82502 | 82516 | 15 | Euglena gracilis chloroplast |
15 | NC_001675 | TAA | 5 | 90635 | 90649 | 15 | Cyanophora paradoxa cyanelle |
16 | NC_002186 | TAA | 5 | 104289 | 104303 | 15 | Mesostigma viride chloroplast |
17 | NC_006861 | TAA | 5 | 138773 | 138787 | 15 | Huperzia lucidula chloroplast |
18 | NC_007932 | TAA | 5 | 132577 | 132591 | 15 | Porphyra yezoensis chloroplast |
19 | NC_008796 | TAA | 5 | 63644 | 63658 | 15 | Ranunculus macranthus chloroplast |
20 | NC_009143 | TAA | 5 | 43059 | 43073 | 15 | Populus trichocarpa chloroplast |
21 | NC_010323 | TAA | 5 | 49836 | 49850 | 15 | Carica papaya chloroplast |
22 | NC_011087 | TAA | 4 | 901262 | 901273 | 12 | Paulinella chromatophora chromatophore |
23 | NC_014287 | TAA | 4 | 1891 | 1902 | 12 | Durinskia baltica chloroplast |
24 | NC_014582 | TAA | 4 | 115607 | 115618 | 12 | Monsonia speciosa plastid |
25 | NC_014589 | TAA | 4 | 90443 | 90454 | 12 | Cathaya argyrophylla chloroplast |
26 | NC_014674 | TAA | 4 | 35912 | 35923 | 12 | Castanea mollissima chloroplast |
27 | NC_014676 | TAA | 4 | 6721 | 6732 | 12 | Theobroma cacao chloroplast |
28 | NC_014699 | TAA | 4 | 38518 | 38529 | 12 | Equisetum arvense chloroplast |
29 | NC_014807 | TAA | 4 | 125433 | 125444 | 12 | Corynocarpus laevigata chloroplast |
30 | NC_014808 | TAA | 4 | 123645 | 123656 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
31 | NC_014874 | TAA | 4 | 10559 | 10570 | 12 | Rhizanthella gardneri plastid |
32 | NC_015402 | TAA | 4 | 68491 | 68502 | 12 | Ptilidium pulcherrimum chloroplast |
33 | NC_015402 | TAA | 4 | 93635 | 93646 | 12 | Ptilidium pulcherrimum chloroplast |
34 | NC_015402 | TAA | 4 | 102754 | 102765 | 12 | Ptilidium pulcherrimum chloroplast |
35 | NC_015543 | TAA | 4 | 31778 | 31789 | 12 | Jacobaea vulgaris chloroplast |
36 | NC_015605 | TAA | 4 | 1732 | 1743 | 12 | Nelumbo lutea chloroplast |
37 | NC_015621 | TAA | 4 | 58884 | 58895 | 12 | Ageratina adenophora chloroplast |
38 | NC_015645 | TAA | 4 | 51136 | 51147 | 12 | Schizomeris leibleinii chloroplast |
39 | NC_015645 | TAA | 4 | 136148 | 136159 | 12 | Schizomeris leibleinii chloroplast |
40 | NC_015645 | TAA | 4 | 141545 | 141556 | 12 | Schizomeris leibleinii chloroplast |
41 | NC_015891 | TAA | 4 | 17867 | 17878 | 12 | Spirodela polyrhiza chloroplast |
42 | NC_015891 | TAA | 4 | 101557 | 101568 | 12 | Spirodela polyrhiza chloroplast |
43 | NC_015899 | TAA | 4 | 17072 | 17083 | 12 | Wolffia australiana chloroplast |
44 | NC_015899 | TAA | 4 | 32844 | 32855 | 12 | Wolffia australiana chloroplast |
45 | NC_015983 | TAA | 4 | 4582 | 4593 | 12 | Cucumis melo subsp. melo chloroplast |
46 | NC_016058 | TAA | 4 | 13621 | 13632 | 12 | Larix decidua chloroplast |
47 | NC_016064 | TAA | 4 | 45684 | 45695 | 12 | Pseudotsuga sinensis var. wilsoniana chloroplast |
48 | NC_016065 | TAA | 4 | 68194 | 68205 | 12 | Taiwania cryptomerioides chloroplast DNA |
49 | NC_016069 | TAA | 4 | 30376 | 30387 | 12 | Picea morrisonicola chloroplast |
50 | NC_016468 | TAA | 4 | 120067 | 120078 | 12 | Boea hygrometrica chloroplast |
51 | NC_016729 | TAA | 4 | 53049 | 53060 | 12 | Silene conica chloroplast |
52 | NC_016729 | TAA | 4 | 126406 | 126417 | 12 | Silene conica chloroplast |
53 | NC_016731 | TAA | 4 | 51794 | 51805 | 12 | Synedra acus chloroplast |
54 | NC_016732 | TAA | 4 | 67429 | 67440 | 12 | Dunaliella salina chloroplast |
55 | NC_016732 | TAA | 4 | 85104 | 85115 | 12 | Dunaliella salina chloroplast |
56 | NC_016735 | TAA | 4 | 18127 | 18138 | 12 | Fucus vesiculosus chloroplast |
57 | NC_016736 | TAA | 4 | 77541 | 77552 | 12 | Ricinus communis chloroplast |
58 | NC_016753 | TAA | 4 | 114912 | 114923 | 12 | Colocasia esculenta chloroplast |
59 | NC_016921 | TAA | 4 | 31405 | 31416 | 12 | Pentactina rupicola chloroplast |
60 | NC_018051 | TAA | 4 | 8036 | 8047 | 12 | Vigna unguiculata chloroplast |
61 | NC_018113 | TAA | 4 | 4087 | 4098 | 12 | Gossypium robinsonii chloroplast |
62 | NC_018113 | TAA | 4 | 134247 | 134258 | 12 | Gossypium robinsonii chloroplast |
63 | NC_018114 | TAA | 4 | 46208 | 46219 | 12 | Erycina pusilla chloroplast |
64 | NC_018541 | TAA | 4 | 120450 | 120461 | 12 | Elodea canadensis chloroplast |
65 | NC_020014 | TAA | 4 | 97608 | 97619 | 12 | Nannochloropsis gaditana chloroplast |
66 | NC_020018 | TAA | 4 | 32817 | 32828 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
67 | NC_020018 | TAA | 4 | 36203 | 36214 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
68 | NC_020018 | TAA | 4 | 48610 | 48621 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
69 | NC_020018 | TAA | 4 | 50739 | 50750 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
70 | NC_020152 | TAA | 4 | 35942 | 35953 | 12 | Quercus rubra plastid |
71 | NC_020362 | TAA | 4 | 17068 | 17079 | 12 | Heliconia collinsiana plastid |
72 | NC_020363 | TAA | 4 | 115378 | 115389 | 12 | Zingiber spectabile plastid |
73 | NC_020371 | TAA | 4 | 12331 | 12342 | 12 | Pavlova lutheri chloroplast |
74 | NC_020438 | TAA | 4 | 145362 | 145373 | 12 | Gonium pectorale chloroplast |
75 | NC_020460 | TAA | 4 | 16060 | 16071 | 12 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
76 | NC_021075 | TAA | 4 | 20712 | 20723 | 12 | Calliarthron tuberculosum chloroplast |
77 | NC_021109 | TAA | 4 | 165443 | 165454 | 12 | Pleodorina starrii plastid |
78 | NC_021109 | TAA | 4 | 231124 | 231135 | 12 | Pleodorina starrii plastid |
79 | NC_021189 | TAA | 4 | 133669 | 133680 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
80 | NC_021425 | TAA | 4 | 129273 | 129284 | 12 | Tetracentron sinense chloroplast |
81 | NC_021426 | TAA | 4 | 4968 | 4979 | 12 | Trochodendron aralioides chloroplast |
82 | NC_021426 | TAA | 4 | 5067 | 5078 | 12 | Trochodendron aralioides chloroplast |
83 | NC_021426 | TAA | 4 | 130685 | 130696 | 12 | Trochodendron aralioides chloroplast |
84 | NC_021449 | TAA | 4 | 120856 | 120867 | 12 | Utricularia gibba chloroplast |
85 | NC_022099 | TAA | 4 | 75724 | 75735 | 12 | Medicago truncatula cultivar Jemalong 2HA plastid |
86 | NC_022100 | TAA | 4 | 75545 | 75556 | 12 | Medicago truncatula cultivar Borung plastid |
87 | NC_001319 | TAA | 4 | 2510 | 2521 | 12 | Marchantia polymorpha chloroplast |
88 | NC_001319 | TAA | 4 | 50760 | 50771 | 12 | Marchantia polymorpha chloroplast |
89 | NC_001568 | TAA | 4 | 1473 | 1484 | 12 | Epifagus virginiana chloroplast |
90 | NC_001568 | TAA | 4 | 12005 | 12016 | 12 | Epifagus virginiana chloroplast |
91 | NC_001603 | TAA | 4 | 3401 | 3412 | 12 | Euglena gracilis chloroplast |
92 | NC_001675 | TAA | 4 | 124496 | 124507 | 12 | Cyanophora paradoxa cyanelle |
93 | NC_002186 | TAA | 4 | 59604 | 59615 | 12 | Mesostigma viride chloroplast |
94 | NC_002202 | TAA | 4 | 55877 | 55888 | 12 | Spinacia oleracea plastid |
95 | NC_002652 | TAA | 4 | 46835 | 46846 | 12 | Euglena longa plastid |
96 | NC_002652 | TAA | 4 | 60328 | 60339 | 12 | Euglena longa plastid |
97 | NC_003119 | TAA | 4 | 75724 | 75735 | 12 | Medicago truncatula chloroplast |
98 | NC_004823 | TAA | 4 | 16085 | 16096 | 12 | Eimeria tenella strain Penn State apicoplast |
99 | NC_004823 | TAA | 4 | 16217 | 16228 | 12 | Eimeria tenella strain Penn State apicoplast |
100 | NC_005087 | TAA | 4 | 52963 | 52974 | 12 | Physcomitrella patens subsp. patens chloroplast |
101 | NC_006861 | TAA | 4 | 122008 | 122019 | 12 | Huperzia lucidula chloroplast |
102 | NC_007144 | TAA | 4 | 74303 | 74314 | 12 | Cucumis sativus chloroplast |
103 | NC_007407 | TAA | 4 | 123306 | 123317 | 12 | Acorus calamus plastid |
104 | NC_007578 | TAA | 4 | 59125 | 59136 | 12 | Lactuca sativa chloroplast |
105 | NC_008097 | TAA | 4 | 7313 | 7324 | 12 | Chara vulgaris chloroplast |
106 | NC_008097 | TAA | 4 | 149437 | 149448 | 12 | Chara vulgaris chloroplast |
107 | NC_008097 | TAA | 4 | 153360 | 153371 | 12 | Chara vulgaris chloroplast |
108 | NC_008097 | TAA | 4 | 180509 | 180520 | 12 | Chara vulgaris chloroplast |
109 | NC_008116 | TAA | 4 | 152850 | 152861 | 12 | Staurastrum punctulatum chloroplast |
110 | NC_008235 | TAA | 4 | 42723 | 42734 | 12 | Populus alba chloroplast |
111 | NC_008235 | TAA | 4 | 42745 | 42756 | 12 | Populus alba chloroplast |
112 | NC_008334 | TAA | 4 | 30762 | 30773 | 12 | Citrus sinensis chloroplast |
113 | NC_008335 | TAA | 4 | 130990 | 131001 | 12 | Platanus occidentalis chloroplast |
114 | NC_008336 | TAA | 4 | 125534 | 125545 | 12 | Nandina domestica chloroplast |
115 | NC_008372 | TAA | 4 | 132220 | 132231 | 12 | Stigeoclonium helveticum chloroplast |
116 | NC_008408 | TAA | 4 | 27413 | 27424 | 12 | Bigelowiella natans plastid |
117 | NC_008535 | TAA | 4 | 55898 | 55909 | 12 | Coffea arabica chloroplast |
118 | NC_008590 | TAA | 4 | 50799 | 50810 | 12 | Hordeum vulgare subsp. vulgare chloroplast |
119 | NC_009143 | TAA | 4 | 43015 | 43026 | 12 | Populus trichocarpa chloroplast |
120 | NC_009143 | TAA | 4 | 43037 | 43048 | 12 | Populus trichocarpa chloroplast |
121 | NC_009143 | TAA | 4 | 43091 | 43102 | 12 | Populus trichocarpa chloroplast |
122 | NC_009265 | TAA | 4 | 112468 | 112479 | 12 | Aethionema cordifolium chloroplast |
123 | NC_009266 | TAA | 4 | 112575 | 112586 | 12 | Aethionema grandiflorum chloroplast |
124 | NC_009601 | TAA | 4 | 126341 | 126352 | 12 | Dioscorea elephantipes chloroplast |
125 | NC_009681 | TAA | 4 | 70733 | 70744 | 12 | Leptosira terrestris chloroplast |
126 | NC_009766 | TAA | 4 | 8428 | 8439 | 12 | Cuscuta reflexa chloroplast |
127 | NC_009963 | TAA | 4 | 28797 | 28808 | 12 | Cuscuta exaltata chloroplast |
128 | NC_010093 | TAA | 4 | 122976 | 122987 | 12 | Acorus americanus chloroplast |
129 | NC_010109 | TAA | 4 | 16991 | 17002 | 12 | Lemna minor chloroplast |
130 | NC_010109 | TAA | 4 | 99920 | 99931 | 12 | Lemna minor chloroplast |
131 | NC_010433 | TAA | 4 | 10781 | 10792 | 12 | Manihot esculenta chloroplast |
132 | NC_010772 | TAA | 4 | 155611 | 155622 | 12 | Heterosigma akashiwo chloroplast |
133 | NC_011600 | TAA | 4 | 11467 | 11478 | 12 | Vaucheria litorea chloroplast |
134 | NC_011600 | TAA | 4 | 58892 | 58903 | 12 | Vaucheria litorea chloroplast |
135 | NC_012052 | TAA | 4 | 110277 | 110288 | 12 | Syntrichia ruralis chloroplast |
136 | NC_012903 | TAA | 4 | 31528 | 31539 | 12 | Aureoumbra lagunensis chloroplast |
137 | NC_013843 | TAA | 4 | 8060 | 8071 | 12 | Vigna radiata chloroplast |
138 | NC_013991 | TAA | 4 | 120603 | 120614 | 12 | Phoenix dactylifera chloroplast |