ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect TAA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014675TAA85575559824Isoetes flaccida chloroplast
2NC_004543TAA7620576207721 Anthoceros formosae chloroplast
3NC_021426TAA65011502818Trochodendron aralioides chloroplast
4NC_021426TAA65209522618Trochodendron aralioides chloroplast
5NC_002186TAA6655696558618 Mesostigma viride chloroplast
6NC_004543TAA612906812908518 Anthoceros formosae chloroplast
7NC_013991TAA612049012050718 Phoenix dactylifera chloroplast
8NC_011087TAA597119397120715Paulinella chromatophora chromatophore
9NC_014582TAA5475174753115Monsonia speciosa plastid
10NC_014675TAA5509405095415Isoetes flaccida chloroplast
11NC_015645TAA516025916027315Schizomeris leibleinii chloroplast
12NC_015894TAA5172351724915Wolffiella lingulata chloroplast
13NC_020320TAA5585635857715Chrysanthemum indicum voucher HeN001 chloroplast
14NC_001603TAA5825028251615 Euglena gracilis chloroplast
15NC_001675TAA5906359064915 Cyanophora paradoxa cyanelle
16NC_002186TAA510428910430315 Mesostigma viride chloroplast
17NC_006861TAA513877313878715 Huperzia lucidula chloroplast
18NC_007932TAA513257713259115 Porphyra yezoensis chloroplast
19NC_008796TAA5636446365815 Ranunculus macranthus chloroplast
20NC_009143TAA5430594307315 Populus trichocarpa chloroplast
21NC_010323TAA5498364985015 Carica papaya chloroplast
22NC_011087TAA490126290127312Paulinella chromatophora chromatophore
23NC_014287TAA41891190212Durinskia baltica chloroplast
24NC_014582TAA411560711561812Monsonia speciosa plastid
25NC_014589TAA4904439045412Cathaya argyrophylla chloroplast
26NC_014674TAA4359123592312Castanea mollissima chloroplast
27NC_014676TAA46721673212Theobroma cacao chloroplast
28NC_014699TAA4385183852912Equisetum arvense chloroplast
29NC_014807TAA412543312544412Corynocarpus laevigata chloroplast
30NC_014808TAA412364512365612Thalassiosira oceanica CCMP1005 chloroplast
31NC_014874TAA4105591057012Rhizanthella gardneri plastid
32NC_015402TAA4684916850212Ptilidium pulcherrimum chloroplast
33NC_015402TAA4936359364612Ptilidium pulcherrimum chloroplast
34NC_015402TAA410275410276512Ptilidium pulcherrimum chloroplast
35NC_015543TAA4317783178912Jacobaea vulgaris chloroplast
36NC_015605TAA41732174312Nelumbo lutea chloroplast
37NC_015621TAA4588845889512Ageratina adenophora chloroplast
38NC_015645TAA4511365114712Schizomeris leibleinii chloroplast
39NC_015645TAA413614813615912Schizomeris leibleinii chloroplast
40NC_015645TAA414154514155612Schizomeris leibleinii chloroplast
41NC_015891TAA4178671787812Spirodela polyrhiza chloroplast
42NC_015891TAA410155710156812Spirodela polyrhiza chloroplast
43NC_015899TAA4170721708312Wolffia australiana chloroplast
44NC_015899TAA4328443285512Wolffia australiana chloroplast
45NC_015983TAA44582459312Cucumis melo subsp. melo chloroplast
46NC_016058TAA4136211363212Larix decidua chloroplast
47NC_016064TAA4456844569512Pseudotsuga sinensis var. wilsoniana chloroplast
48NC_016065TAA4681946820512Taiwania cryptomerioides chloroplast DNA
49NC_016069TAA4303763038712Picea morrisonicola chloroplast
50NC_016468TAA412006712007812Boea hygrometrica chloroplast
51NC_016729TAA4530495306012Silene conica chloroplast
52NC_016729TAA412640612641712Silene conica chloroplast
53NC_016731TAA4517945180512Synedra acus chloroplast
54NC_016732TAA4674296744012Dunaliella salina chloroplast
55NC_016732TAA4851048511512Dunaliella salina chloroplast
56NC_016735TAA4181271813812Fucus vesiculosus chloroplast
57NC_016736TAA4775417755212Ricinus communis chloroplast
58NC_016753TAA411491211492312Colocasia esculenta chloroplast
59NC_016921TAA4314053141612Pentactina rupicola chloroplast
60NC_018051TAA48036804712Vigna unguiculata chloroplast
61NC_018113TAA44087409812Gossypium robinsonii chloroplast
62NC_018113TAA413424713425812Gossypium robinsonii chloroplast
63NC_018114TAA4462084621912Erycina pusilla chloroplast
64NC_018541TAA412045012046112Elodea canadensis chloroplast
65NC_020014TAA4976089761912Nannochloropsis gaditana chloroplast
66NC_020018TAA4328173282812Monomorphina aenigmatica strain UTEX1284 chloroplast
67NC_020018TAA4362033621412Monomorphina aenigmatica strain UTEX1284 chloroplast
68NC_020018TAA4486104862112Monomorphina aenigmatica strain UTEX1284 chloroplast
69NC_020018TAA4507395075012Monomorphina aenigmatica strain UTEX1284 chloroplast
70NC_020152TAA4359423595312Quercus rubra plastid
71NC_020362TAA4170681707912Heliconia collinsiana plastid
72NC_020363TAA411537811538912Zingiber spectabile plastid
73NC_020371TAA4123311234212Pavlova lutheri chloroplast
74NC_020438TAA414536214537312Gonium pectorale chloroplast
75NC_020460TAA4160601607112Euglena viridis culture-collection ATCC:PRA110 chloroplast
76NC_021075TAA4207122072312Calliarthron tuberculosum chloroplast
77NC_021109TAA416544316545412Pleodorina starrii plastid
78NC_021109TAA423112423113512Pleodorina starrii plastid
79NC_021189TAA413366913368012Pyropia haitanensis voucher PH-38 chloroplast
80NC_021425TAA412927312928412Tetracentron sinense chloroplast
81NC_021426TAA44968497912Trochodendron aralioides chloroplast
82NC_021426TAA45067507812Trochodendron aralioides chloroplast
83NC_021426TAA413068513069612Trochodendron aralioides chloroplast
84NC_021449TAA412085612086712Utricularia gibba chloroplast
85NC_022099TAA4757247573512Medicago truncatula cultivar Jemalong 2HA plastid
86NC_022100TAA4755457555612Medicago truncatula cultivar Borung plastid
87NC_001319TAA42510252112 Marchantia polymorpha chloroplast
88NC_001319TAA4507605077112 Marchantia polymorpha chloroplast
89NC_001568TAA41473148412 Epifagus virginiana chloroplast
90NC_001568TAA4120051201612 Epifagus virginiana chloroplast
91NC_001603TAA43401341212 Euglena gracilis chloroplast
92NC_001675TAA412449612450712 Cyanophora paradoxa cyanelle
93NC_002186TAA4596045961512 Mesostigma viride chloroplast
94NC_002202TAA4558775588812 Spinacia oleracea plastid
95NC_002652TAA4468354684612 Euglena longa plastid
96NC_002652TAA4603286033912 Euglena longa plastid
97NC_003119TAA4757247573512 Medicago truncatula chloroplast
98NC_004823TAA4160851609612 Eimeria tenella strain Penn State apicoplast
99NC_004823TAA4162171622812 Eimeria tenella strain Penn State apicoplast
100NC_005087TAA4529635297412 Physcomitrella patens subsp. patens chloroplast
101NC_006861TAA412200812201912 Huperzia lucidula chloroplast
102NC_007144TAA4743037431412 Cucumis sativus chloroplast
103NC_007407TAA412330612331712 Acorus calamus plastid
104NC_007578TAA4591255913612 Lactuca sativa chloroplast
105NC_008097TAA47313732412 Chara vulgaris chloroplast
106NC_008097TAA414943714944812 Chara vulgaris chloroplast
107NC_008097TAA415336015337112 Chara vulgaris chloroplast
108NC_008097TAA418050918052012 Chara vulgaris chloroplast
109NC_008116TAA415285015286112 Staurastrum punctulatum chloroplast
110NC_008235TAA4427234273412 Populus alba chloroplast
111NC_008235TAA4427454275612 Populus alba chloroplast
112NC_008334TAA4307623077312 Citrus sinensis chloroplast
113NC_008335TAA413099013100112 Platanus occidentalis chloroplast
114NC_008336TAA412553412554512 Nandina domestica chloroplast
115NC_008372TAA413222013223112 Stigeoclonium helveticum chloroplast
116NC_008408TAA4274132742412 Bigelowiella natans plastid
117NC_008535TAA4558985590912 Coffea arabica chloroplast
118NC_008590TAA4507995081012 Hordeum vulgare subsp. vulgare chloroplast
119NC_009143TAA4430154302612 Populus trichocarpa chloroplast
120NC_009143TAA4430374304812 Populus trichocarpa chloroplast
121NC_009143TAA4430914310212 Populus trichocarpa chloroplast
122NC_009265TAA411246811247912 Aethionema cordifolium chloroplast
123NC_009266TAA411257511258612 Aethionema grandiflorum chloroplast
124NC_009601TAA412634112635212 Dioscorea elephantipes chloroplast
125NC_009681TAA4707337074412 Leptosira terrestris chloroplast
126NC_009766TAA48428843912 Cuscuta reflexa chloroplast
127NC_009963TAA4287972880812 Cuscuta exaltata chloroplast
128NC_010093TAA412297612298712 Acorus americanus chloroplast
129NC_010109TAA4169911700212 Lemna minor chloroplast
130NC_010109TAA4999209993112 Lemna minor chloroplast
131NC_010433TAA4107811079212 Manihot esculenta chloroplast
132NC_010772TAA415561115562212 Heterosigma akashiwo chloroplast
133NC_011600TAA4114671147812 Vaucheria litorea chloroplast
134NC_011600TAA4588925890312 Vaucheria litorea chloroplast
135NC_012052TAA411027711028812 Syntrichia ruralis chloroplast
136NC_012903TAA4315283153912 Aureoumbra lagunensis chloroplast
137NC_013843TAA48060807112 Vigna radiata chloroplast
138NC_013991TAA412060312061412 Phoenix dactylifera chloroplast