Chloroplast Motifs - Perfect GAAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_004543 | GAAA | 4 | 126348 | 126363 | 16 | Anthoceros formosae chloroplast |
2 | NC_014573 | GAAA | 3 | 119051 | 119062 | 12 | Geranium palmatum plastid |
3 | NC_014874 | GAAA | 3 | 55390 | 55401 | 12 | Rhizanthella gardneri plastid |
4 | NC_015401 | GAAA | 3 | 63005 | 63016 | 12 | Olea europaea subsp. europaea plastid |
5 | NC_015604 | GAAA | 3 | 63000 | 63011 | 12 | Olea europaea subsp. cuspidata chloroplast |
6 | NC_015608 | GAAA | 3 | 63074 | 63085 | 12 | Olea woodiana subsp. woodiana chloroplast |
7 | NC_015623 | GAAA | 3 | 63015 | 63026 | 12 | Olea europaea subsp. maroccana chloroplast |
8 | NC_015645 | GAAA | 3 | 21628 | 21639 | 12 | Schizomeris leibleinii chloroplast |
9 | NC_015803 | GAAA | 3 | 74447 | 74458 | 12 | Indocalamus longiauritus plastid |
10 | NC_015817 | GAAA | 3 | 74400 | 74411 | 12 | Phyllostachys edulis chloroplast |
11 | NC_015820 | GAAA | 3 | 74441 | 74452 | 12 | Acidosasa purpurea chloroplast |
12 | NC_015826 | GAAA | 3 | 74407 | 74418 | 12 | Phyllostachys nigra var. henonis chloroplast |
13 | NC_015830 | GAAA | 3 | 65091 | 65102 | 12 | Bambusa emeiensis chloroplast |
14 | NC_015831 | GAAA | 3 | 74183 | 74194 | 12 | Ferrocalamus rimosivaginus plastid |
15 | NC_015831 | GAAA | 3 | 75246 | 75257 | 12 | Ferrocalamus rimosivaginus plastid |
16 | NC_016063 | GAAA | 3 | 88949 | 88960 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
17 | NC_016063 | GAAA | 3 | 89045 | 89056 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
18 | NC_016063 | GAAA | 3 | 89105 | 89116 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
19 | NC_016063 | GAAA | 3 | 89138 | 89149 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
20 | NC_016063 | GAAA | 3 | 89162 | 89173 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
21 | NC_016063 | GAAA | 3 | 89195 | 89206 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
22 | NC_016063 | GAAA | 3 | 89219 | 89230 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
23 | NC_016063 | GAAA | 3 | 89288 | 89299 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
24 | NC_016063 | GAAA | 3 | 89312 | 89323 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
25 | NC_016063 | GAAA | 3 | 89336 | 89347 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
26 | NC_016433 | GAAA | 3 | 61901 | 61912 | 12 | Sesamum indicum chloroplast |
27 | NC_016699 | GAAA | 3 | 74402 | 74413 | 12 | Phyllostachys propinqua chloroplast |
28 | NC_016718 | GAAA | 3 | 32937 | 32948 | 12 | Rhynchoryza subulata plastid |
29 | NC_018569 | GAAA | 3 | 25918 | 25929 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
30 | NC_019616 | GAAA | 3 | 120327 | 120338 | 12 | Vaccinium macrocarpon plastid |
31 | NC_019616 | GAAA | 3 | 129100 | 129111 | 12 | Vaccinium macrocarpon plastid |
32 | NC_019616 | GAAA | 3 | 131580 | 131591 | 12 | Vaccinium macrocarpon plastid |
33 | NC_020019 | GAAA | 3 | 118241 | 118252 | 12 | Camellia sinensis chloroplast |
34 | NC_020341 | GAAA | 3 | 73801 | 73812 | 12 | Arundinaria gigantea chloroplast |
35 | NC_020362 | GAAA | 3 | 68372 | 68383 | 12 | Heliconia collinsiana plastid |
36 | NC_020363 | GAAA | 3 | 66697 | 66708 | 12 | Zingiber spectabile plastid |
37 | NC_020363 | GAAA | 3 | 66710 | 66721 | 12 | Zingiber spectabile plastid |
38 | NC_020367 | GAAA | 3 | 69086 | 69097 | 12 | Dasypogon bromeliifolius plastid |
39 | NC_021110 | GAAA | 3 | 88297 | 88308 | 12 | Cephalotaxus oliveri chloroplast |
40 | NC_021110 | GAAA | 3 | 88345 | 88356 | 12 | Cephalotaxus oliveri chloroplast |
41 | NC_021121 | GAAA | 3 | 122685 | 122696 | 12 | Ardisia polysticta chloroplast |
42 | NC_021430 | GAAA | 3 | 121977 | 121988 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
43 | NC_021431 | GAAA | 3 | 122065 | 122076 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
44 | NC_021439 | GAAA | 3 | 48827 | 48838 | 12 | Pinus massoniana chloroplast |
45 | NC_022136 | GAAA | 3 | 53912 | 53923 | 12 | Lygodium japonicum chloroplast |
46 | NC_022136 | GAAA | 3 | 153148 | 153159 | 12 | Lygodium japonicum chloroplast |
47 | NC_000927 | GAAA | 3 | 153848 | 153859 | 12 | Nephroselmis olivacea chloroplast |
48 | NC_001631 | GAAA | 3 | 48878 | 48889 | 12 | Pinus thunbergii chloroplast |
49 | NC_008235 | GAAA | 3 | 14160 | 14171 | 12 | Populus alba chloroplast |
50 | NC_008326 | GAAA | 3 | 368 | 379 | 12 | Liriodendron tulipifera chloroplast |
51 | NC_009143 | GAAA | 3 | 14230 | 14241 | 12 | Populus trichocarpa chloroplast |
52 | NC_009573 | GAAA | 3 | 121846 | 121857 | 12 | Rhodomonas salina chloroplast |
53 | NC_009808 | GAAA | 3 | 46053 | 46064 | 12 | Ipomoea purpurea chloroplast |
54 | NC_009808 | GAAA | 3 | 49394 | 49405 | 12 | Ipomoea purpurea chloroplast |
55 | NC_010359 | GAAA | 3 | 17148 | 17159 | 12 | Aneura mirabilis chloroplast |
56 | NC_010433 | GAAA | 3 | 16187 | 16198 | 12 | Manihot esculenta chloroplast |
57 | NC_010442 | GAAA | 3 | 18616 | 18627 | 12 | Trachelium caeruleum chloroplast |
58 | NC_010442 | GAAA | 3 | 26108 | 26119 | 12 | Trachelium caeruleum chloroplast |
59 | NC_011032 | GAAA | 3 | 61660 | 61671 | 12 | Brachypodium distachyon chloroplast |
60 | NC_012224 | GAAA | 3 | 16885 | 16896 | 12 | Jatropha curcas chloroplast |
61 | NC_012927 | GAAA | 3 | 64985 | 64996 | 12 | Bambusa oldhamii chloroplast |
62 | NC_013088 | GAAA | 3 | 65092 | 65103 | 12 | Dendrocalamus latiflorus chloroplast |
63 | NC_014056 | GAAA | 3 | 141865 | 141876 | 12 | Oncidium Gower Ramsey chloroplast |
64 | NC_014057 | GAAA | 3 | 31202 | 31213 | 12 | Pisum sativum chloroplast |