ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Chloroplast Motifs - Perfect AGA Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_020321	AGA	9	55510	55536	27	Taxus mairei voucher NN014 chloroplast
2	NC_020321	AGA	7	55540	55560	21	Taxus mairei voucher NN014 chloroplast
3	NC_016065	AGA	6	84719	84736	18	Taiwania cryptomerioides chloroplast DNA
4	NC_020438	AGA	6	166038	166055	18	Gonium pectorale chloroplast
5	NC_021441	AGA	6	83751	83768	18	Taiwania flousiana chloroplast
6	NC_018565	AGA	5	43954	43968	15	Pachycladon enysii chloroplast
7	NC_020321	AGA	5	55492	55506	15	Taxus mairei voucher NN014 chloroplast
8	NC_020321	AGA	5	55582	55596	15	Taxus mairei voucher NN014 chloroplast
9	NC_020321	AGA	5	55600	55614	15	Taxus mairei voucher NN014 chloroplast
10	NC_020321	AGA	5	55618	55632	15	Taxus mairei voucher NN014 chloroplast
11	NC_021438	AGA	5	73673	73687	15	Gnetum montanum chloroplast
12	NC_011942	AGA	5	16136	16150	15	Gnetum parvifolium chloroplast
13	NC_014346	AGA	4	125399	125410	12	Floydiella terrestris chloroplast
14	NC_014589	AGA	4	100204	100215	12	Cathaya argyrophylla chloroplast
15	NC_015359	AGA	4	51251	51262	12	Chlorella variabilis plastid
16	NC_015543	AGA	4	44282	44293	12	Jacobaea vulgaris chloroplast
17	NC_015605	AGA	4	117832	117843	12	Nelumbo lutea chloroplast
18	NC_015610	AGA	4	117931	117942	12	Nelumbo nucifera chloroplast
19	NC_015645	AGA	4	78813	78824	12	Schizomeris leibleinii chloroplast
20	NC_015899	AGA	4	39826	39837	12	Wolffia australiana chloroplast
21	NC_015990	AGA	4	21416	21427	12	Panicum virgatum chloroplast
22	NC_016733	AGA	4	78278	78289	12	Pedinomonas minor chloroplast
23	NC_016735	AGA	4	31430	31441	12	Fucus vesiculosus chloroplast
24	NC_018523	AGA	4	72336	72347	12	Saccharina japonica chloroplast
25	NC_020321	AGA	4	54147	54158	12	Taxus mairei voucher NN014 chloroplast
26	NC_020321	AGA	4	55645	55656	12	Taxus mairei voucher NN014 chloroplast
27	NC_021102	AGA	4	43512	43523	12	Pachycladon cheesemanii chloroplast
28	NC_021429	AGA	4	68149	68160	12	Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
29	NC_021430	AGA	4	67500	67511	12	Cymbidium sinense voucher KUN:YJB100605 chloroplast
30	NC_021431	AGA	4	67568	67579	12	Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
31	NC_021432	AGA	4	67613	67624	12	Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
32	NC_021433	AGA	4	67851	67862	12	Cymbidium mannii voucher KUN:YJB100602 chloroplast
33	NC_021437	AGA	4	29456	29467	12	Cunninghamia lanceolata chloroplast
34	NC_021438	AGA	4	73697	73708	12	Gnetum montanum chloroplast
35	NC_000927	AGA	4	74678	74689	12	Nephroselmis olivacea chloroplast
36	NC_002202	AGA	4	57538	57549	12	Spinacia oleracea plastid
37	NC_004799	AGA	4	46647	46658	12	Cyanidioschyzon merolae strain 10D chloroplast
38	NC_008335	AGA	4	76106	76117	12	Platanus occidentalis chloroplast
39	NC_009265	AGA	4	43536	43547	12	Aethionema cordifolium chloroplast
40	NC_009267	AGA	4	43757	43768	12	Olimarabidopsis pumila chloroplast
41	NC_009269	AGA	4	43972	43983	12	Barbarea verna chloroplast
42	NC_009270	AGA	4	43541	43552	12	Capsella bursa-pastoris chloroplast
43	NC_009275	AGA	4	43787	43798	12	Nasturtium officinale chloroplast
44	NC_009601	AGA	4	1441	1452	12	Dioscorea elephantipes chloroplast
45	NC_009601	AGA	4	146375	146386	12	Dioscorea elephantipes chloroplast
46	NC_009808	AGA	4	73832	73843	12	Ipomoea purpurea chloroplast
47	NC_010442	AGA	4	116841	116852	12	Trachelium caeruleum chloroplast
48	NC_011600	AGA	4	84743	84754	12	Vaucheria litorea chloroplast
49	NC_011942	AGA	4	16160	16171	12	Gnetum parvifolium chloroplast
50	NC_011942	AGA	4	72590	72601	12	Gnetum parvifolium chloroplast
51	NC_012099	AGA	4	3885	3896	12	Pyramimonas parkeae chloroplast
52	NC_012101	AGA	4	100732	100743	12	Monomastix sp. OKE-1 chloroplast
53	NC_012903	AGA	4	64505	64516	12	Aureoumbra lagunensis chloroplast
54	NC_014062	AGA	4	21376	21387	12	Anomochloa marantoidea chloroplast

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Chloroplast Motifs - Perfect AGA Repeats