Chloroplast Motifs - Perfect AATA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014874 | AATA | 4 | 18656 | 18671 | 16 | Rhizanthella gardneri plastid |
2 | NC_011087 | AATA | 3 | 377888 | 377899 | 12 | Paulinella chromatophora chromatophore |
3 | NC_014348 | AATA | 3 | 35087 | 35098 | 12 | Pteridium aquilinum subsp. aquilinum chloroplast |
4 | NC_014807 | AATA | 3 | 117477 | 117488 | 12 | Corynocarpus laevigata chloroplast |
5 | NC_015206 | AATA | 3 | 6470 | 6481 | 12 | Fragaria vesca subsp. vesca chloroplast |
6 | NC_015803 | AATA | 3 | 58691 | 58702 | 12 | Indocalamus longiauritus plastid |
7 | NC_015817 | AATA | 3 | 58633 | 58644 | 12 | Phyllostachys edulis chloroplast |
8 | NC_015820 | AATA | 3 | 58684 | 58695 | 12 | Acidosasa purpurea chloroplast |
9 | NC_015820 | AATA | 3 | 115710 | 115721 | 12 | Acidosasa purpurea chloroplast |
10 | NC_015826 | AATA | 3 | 58606 | 58617 | 12 | Phyllostachys nigra var. henonis chloroplast |
11 | NC_015830 | AATA | 3 | 58412 | 58423 | 12 | Bambusa emeiensis chloroplast |
12 | NC_015831 | AATA | 3 | 58370 | 58381 | 12 | Ferrocalamus rimosivaginus plastid |
13 | NC_015831 | AATA | 3 | 115446 | 115457 | 12 | Ferrocalamus rimosivaginus plastid |
14 | NC_016468 | AATA | 3 | 55362 | 55373 | 12 | Boea hygrometrica chloroplast |
15 | NC_016677 | AATA | 3 | 108499 | 108510 | 12 | Leersia tisserantii plastid |
16 | NC_016699 | AATA | 3 | 58638 | 58649 | 12 | Phyllostachys propinqua chloroplast |
17 | NC_016708 | AATA | 3 | 114076 | 114087 | 12 | Millettia pinnata chloroplast |
18 | NC_016718 | AATA | 3 | 56902 | 56913 | 12 | Rhynchoryza subulata plastid |
19 | NC_016729 | AATA | 3 | 81056 | 81067 | 12 | Silene conica chloroplast |
20 | NC_016732 | AATA | 3 | 59362 | 59373 | 12 | Dunaliella salina chloroplast |
21 | NC_016732 | AATA | 3 | 82351 | 82362 | 12 | Dunaliella salina chloroplast |
22 | NC_016753 | AATA | 3 | 115823 | 115834 | 12 | Colocasia esculenta chloroplast |
23 | NC_016927 | AATA | 3 | 55782 | 55793 | 12 | Oryza meridionalis chloroplast |
24 | NC_017835 | AATA | 3 | 55764 | 55775 | 12 | Oryza rufipogon chloroplast |
25 | NC_018051 | AATA | 3 | 111965 | 111976 | 12 | Vigna unguiculata chloroplast |
26 | NC_018541 | AATA | 3 | 76784 | 76795 | 12 | Elodea canadensis chloroplast |
27 | NC_018766 | AATA | 3 | 6439 | 6450 | 12 | Fragaria vesca subsp. bracteata chloroplast |
28 | NC_018767 | AATA | 3 | 6440 | 6451 | 12 | Fragaria mandshurica plastid |
29 | NC_019601 | AATA | 3 | 6457 | 6468 | 12 | Fragaria chiloensis chloroplast |
30 | NC_019602 | AATA | 3 | 6457 | 6468 | 12 | Fragaria virginiana chloroplast |
31 | NC_020018 | AATA | 3 | 14888 | 14899 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
32 | NC_020092 | AATA | 3 | 29884 | 29895 | 12 | Chrysanthemum x morifolium chloroplast |
33 | NC_020092 | AATA | 3 | 35064 | 35075 | 12 | Chrysanthemum x morifolium chloroplast |
34 | NC_020316 | AATA | 3 | 4437 | 4448 | 12 | Magnolia officinalis chloroplast |
35 | NC_020317 | AATA | 3 | 4434 | 4445 | 12 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
36 | NC_020320 | AATA | 3 | 29893 | 29904 | 12 | Chrysanthemum indicum voucher HeN001 chloroplast |
37 | NC_020341 | AATA | 3 | 58614 | 58625 | 12 | Arundinaria gigantea chloroplast |
38 | NC_020341 | AATA | 3 | 114945 | 114956 | 12 | Arundinaria gigantea chloroplast |
39 | NC_020363 | AATA | 3 | 14622 | 14633 | 12 | Zingiber spectabile plastid |
40 | NC_020431 | AATA | 3 | 68068 | 68079 | 12 | Salvia miltiorrhiza chloroplast |
41 | NC_020607 | AATA | 3 | 29894 | 29905 | 12 | Artemisia frigida chloroplast |
42 | NC_020795 | AATA | 3 | 11921 | 11932 | 12 | Chondrus crispus plastid complete genome |
43 | NC_021075 | AATA | 3 | 34309 | 34320 | 12 | Calliarthron tuberculosum chloroplast |
44 | NC_021075 | AATA | 3 | 167175 | 167186 | 12 | Calliarthron tuberculosum chloroplast |
45 | NC_021091 | AATA | 3 | 112376 | 112387 | 12 | Vigna angularis chloroplast DNA |
46 | NC_021091 | AATA | 3 | 122833 | 122844 | 12 | Vigna angularis chloroplast DNA |
47 | NC_021449 | AATA | 3 | 79499 | 79510 | 12 | Utricularia gibba chloroplast |
48 | NC_021645 | AATA | 3 | 52201 | 52212 | 12 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
49 | NC_001320 | AATA | 3 | 55770 | 55781 | 12 | Oryza sativa Japonica Group plastid |
50 | NC_001675 | AATA | 3 | 84613 | 84624 | 12 | Cyanophora paradoxa cyanelle |
51 | NC_001840 | AATA | 3 | 247 | 258 | 12 | Cyanidium caldarium chloroplast |
52 | NC_004115 | AATA | 3 | 25343 | 25354 | 12 | Chaetosphaeridium globosum chloroplast |
53 | NC_005353 | AATA | 3 | 26039 | 26050 | 12 | Chlamydomonas reinhardtii chloroplast |
54 | NC_005973 | AATA | 3 | 55705 | 55716 | 12 | Oryza nivara chloroplast |
55 | NC_008097 | AATA | 3 | 117207 | 117218 | 12 | Chara vulgaris chloroplast |
56 | NC_008099 | AATA | 3 | 119559 | 119570 | 12 | Oltmannsiellopsis viridis chloroplast |
57 | NC_008100 | AATA | 3 | 27888 | 27899 | 12 | Helicosporidium sp. ex Simulium jonesii plastid |
58 | NC_008117 | AATA | 3 | 85833 | 85844 | 12 | Zygnema circumcarinatum chloroplast |
59 | NC_008155 | AATA | 3 | 55726 | 55737 | 12 | Oryza sativa Indica Group chloroplast |
60 | NC_008235 | AATA | 3 | 59570 | 59581 | 12 | Populus alba chloroplast |
61 | NC_008335 | AATA | 3 | 10057 | 10068 | 12 | Platanus occidentalis chloroplast |
62 | NC_008788 | AATA | 3 | 75261 | 75272 | 12 | Nuphar advena chloroplast |
63 | NC_008796 | AATA | 3 | 59771 | 59782 | 12 | Ranunculus macranthus chloroplast |
64 | NC_009143 | AATA | 3 | 59962 | 59973 | 12 | Populus trichocarpa chloroplast |
65 | NC_009681 | AATA | 3 | 9541 | 9552 | 12 | Leptosira terrestris chloroplast |
66 | NC_009681 | AATA | 3 | 78920 | 78931 | 12 | Leptosira terrestris chloroplast |
67 | NC_009808 | AATA | 3 | 84673 | 84684 | 12 | Ipomoea purpurea chloroplast |
68 | NC_010442 | AATA | 3 | 149248 | 149259 | 12 | Trachelium caeruleum chloroplast |
69 | NC_010442 | AATA | 3 | 150256 | 150267 | 12 | Trachelium caeruleum chloroplast |
70 | NC_011828 | AATA | 3 | 2333 | 2344 | 12 | Trifolium subterraneum chloroplast |
71 | NC_012224 | AATA | 3 | 10020 | 10031 | 12 | Jatropha curcas chloroplast |
72 | NC_012224 | AATA | 3 | 75396 | 75407 | 12 | Jatropha curcas chloroplast |
73 | NC_012568 | AATA | 3 | 12106 | 12117 | 12 | Micromonas pusilla CCMP1545 chloroplast |
74 | NC_012927 | AATA | 3 | 58307 | 58318 | 12 | Bambusa oldhamii chloroplast |
75 | NC_013088 | AATA | 3 | 58426 | 58437 | 12 | Dendrocalamus latiflorus chloroplast |
76 | NC_013843 | AATA | 3 | 111989 | 112000 | 12 | Vigna radiata chloroplast |
77 | NC_014063 | AATA | 3 | 99953 | 99964 | 12 | Lathyrus sativus chloroplast |