Chloroplast Motifs - Perfect AAAT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008101 | AAAT | 5 | 113070 | 113089 | 20 | Scenedesmus obliquus chloroplast |
2 | NC_014674 | AAAT | 4 | 119472 | 119487 | 16 | Castanea mollissima chloroplast |
3 | NC_015983 | AAAT | 4 | 152085 | 152100 | 16 | Cucumis melo subsp. melo chloroplast |
4 | NC_020152 | AAAT | 4 | 119780 | 119795 | 16 | Quercus rubra plastid |
5 | NC_007144 | AAAT | 4 | 152176 | 152191 | 16 | Cucumis sativus chloroplast |
6 | NC_013823 | AAAT | 4 | 50337 | 50352 | 16 | Typha latifolia chloroplast |
7 | NC_014676 | AAAT | 3 | 50544 | 50555 | 12 | Theobroma cacao chloroplast |
8 | NC_014697 | AAAT | 3 | 72059 | 72070 | 12 | Prunus persica chloroplast |
9 | NC_014808 | AAAT | 3 | 41215 | 41226 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
10 | NC_014808 | AAAT | 3 | 113332 | 113343 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
11 | NC_014874 | AAAT | 3 | 8146 | 8157 | 12 | Rhizanthella gardneri plastid |
12 | NC_015204 | AAAT | 3 | 6511 | 6522 | 12 | Gossypium thurberi chloroplast |
13 | NC_015206 | AAAT | 3 | 55766 | 55777 | 12 | Fragaria vesca subsp. vesca chloroplast |
14 | NC_015308 | AAAT | 3 | 118728 | 118739 | 12 | Hevea brasiliensis chloroplast |
15 | NC_015608 | AAAT | 3 | 4771 | 4782 | 12 | Olea woodiana subsp. woodiana chloroplast |
16 | NC_015645 | AAAT | 3 | 159798 | 159809 | 12 | Schizomeris leibleinii chloroplast |
17 | NC_015803 | AAAT | 3 | 112474 | 112485 | 12 | Indocalamus longiauritus plastid |
18 | NC_015803 | AAAT | 3 | 115688 | 115699 | 12 | Indocalamus longiauritus plastid |
19 | NC_015817 | AAAT | 3 | 115693 | 115704 | 12 | Phyllostachys edulis chloroplast |
20 | NC_015820 | AAAT | 3 | 112513 | 112524 | 12 | Acidosasa purpurea chloroplast |
21 | NC_015826 | AAAT | 3 | 112553 | 112564 | 12 | Phyllostachys nigra var. henonis chloroplast |
22 | NC_015826 | AAAT | 3 | 115788 | 115799 | 12 | Phyllostachys nigra var. henonis chloroplast |
23 | NC_015831 | AAAT | 3 | 112228 | 112239 | 12 | Ferrocalamus rimosivaginus plastid |
24 | NC_015892 | AAAT | 3 | 116872 | 116883 | 12 | Magnolia kwangsiensis chloroplast |
25 | NC_015983 | AAAT | 3 | 83137 | 83148 | 12 | Cucumis melo subsp. melo chloroplast |
26 | NC_016068 | AAAT | 3 | 6744 | 6755 | 12 | Nicotiana undulata chloroplast |
27 | NC_016068 | AAAT | 3 | 56752 | 56763 | 12 | Nicotiana undulata chloroplast |
28 | NC_016468 | AAAT | 3 | 43053 | 43064 | 12 | Boea hygrometrica chloroplast |
29 | NC_016668 | AAAT | 3 | 6429 | 6440 | 12 | Gossypium raimondii chloroplast |
30 | NC_016670 | AAAT | 3 | 6515 | 6526 | 12 | Gossypium darwinii chloroplast |
31 | NC_016690 | AAAT | 3 | 6507 | 6518 | 12 | Gossypium tomentosum chloroplast |
32 | NC_016692 | AAAT | 3 | 6498 | 6509 | 12 | Gossypium herbaceum subsp. africanum chloroplast |
33 | NC_016699 | AAAT | 3 | 112488 | 112499 | 12 | Phyllostachys propinqua chloroplast |
34 | NC_016699 | AAAT | 3 | 115717 | 115728 | 12 | Phyllostachys propinqua chloroplast |
35 | NC_016711 | AAAT | 3 | 6493 | 6504 | 12 | Gossypium mustelinum chloroplast |
36 | NC_016712 | AAAT | 3 | 6499 | 6510 | 12 | Gossypium arboreum chloroplast |
37 | NC_016733 | AAAT | 3 | 32899 | 32910 | 12 | Pedinomonas minor chloroplast |
38 | NC_016735 | AAAT | 3 | 87264 | 87275 | 12 | Fucus vesiculosus chloroplast |
39 | NC_016736 | AAAT | 3 | 147381 | 147392 | 12 | Ricinus communis chloroplast |
40 | NC_017602 | AAAT | 3 | 76417 | 76428 | 12 | Elaeis guineensis chloroplast |
41 | NC_017894 | AAAT | 3 | 6449 | 6460 | 12 | Gossypium gossypioides chloroplast |
42 | NC_018109 | AAAT | 3 | 6439 | 6450 | 12 | Gossypium incanum chloroplast |
43 | NC_018110 | AAAT | 3 | 6466 | 6477 | 12 | Gossypium somalense chloroplast |
44 | NC_018111 | AAAT | 3 | 6501 | 6512 | 12 | Gossypium capitis-viridis chloroplast |
45 | NC_018112 | AAAT | 3 | 6466 | 6477 | 12 | Gossypium areysianum chloroplast |
46 | NC_018113 | AAAT | 3 | 6622 | 6633 | 12 | Gossypium robinsonii chloroplast |
47 | NC_018114 | AAAT | 3 | 49981 | 49992 | 12 | Erycina pusilla chloroplast |
48 | NC_018117 | AAAT | 3 | 56292 | 56303 | 12 | Datura stramonium chloroplast |
49 | NC_018357 | AAAT | 3 | 117043 | 117054 | 12 | Magnolia denudata chloroplast |
50 | NC_018541 | AAAT | 3 | 16715 | 16726 | 12 | Elodea canadensis chloroplast |
51 | NC_018565 | AAAT | 3 | 64752 | 64763 | 12 | Pachycladon enysii chloroplast |
52 | NC_018766 | AAAT | 3 | 55799 | 55810 | 12 | Fragaria vesca subsp. bracteata chloroplast |
53 | NC_018767 | AAAT | 3 | 55790 | 55801 | 12 | Fragaria mandshurica plastid |
54 | NC_019601 | AAAT | 3 | 55727 | 55738 | 12 | Fragaria chiloensis chloroplast |
55 | NC_019602 | AAAT | 3 | 55760 | 55771 | 12 | Fragaria virginiana chloroplast |
56 | NC_019616 | AAAT | 3 | 147699 | 147710 | 12 | Vaccinium macrocarpon plastid |
57 | NC_020014 | AAAT | 3 | 102174 | 102185 | 12 | Nannochloropsis gaditana chloroplast |
58 | NC_020018 | AAAT | 3 | 51071 | 51082 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
59 | NC_020019 | AAAT | 3 | 62708 | 62719 | 12 | Camellia sinensis chloroplast |
60 | NC_020019 | AAAT | 3 | 121386 | 121397 | 12 | Camellia sinensis chloroplast |
61 | NC_020316 | AAAT | 3 | 117143 | 117154 | 12 | Magnolia officinalis chloroplast |
62 | NC_020317 | AAAT | 3 | 117092 | 117103 | 12 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
63 | NC_020318 | AAAT | 3 | 116677 | 116688 | 12 | Magnolia grandiflora voucher NJ016 chloroplast |
64 | NC_020341 | AAAT | 3 | 111749 | 111760 | 12 | Arundinaria gigantea chloroplast |
65 | NC_020363 | AAAT | 3 | 120771 | 120782 | 12 | Zingiber spectabile plastid |
66 | NC_020363 | AAAT | 3 | 128195 | 128206 | 12 | Zingiber spectabile plastid |
67 | NC_020438 | AAAT | 3 | 20480 | 20491 | 12 | Gonium pectorale chloroplast |
68 | NC_020438 | AAAT | 3 | 126556 | 126567 | 12 | Gonium pectorale chloroplast |
69 | NC_020460 | AAAT | 3 | 54944 | 54955 | 12 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
70 | NC_020460 | AAAT | 3 | 59111 | 59122 | 12 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
71 | NC_020795 | AAAT | 3 | 57559 | 57570 | 12 | Chondrus crispus plastid complete genome |
72 | NC_021075 | AAAT | 3 | 106120 | 106131 | 12 | Calliarthron tuberculosum chloroplast |
73 | NC_021101 | AAAT | 3 | 36320 | 36331 | 12 | Francoa sonchifolia plastid |
74 | NC_021102 | AAAT | 3 | 64429 | 64440 | 12 | Pachycladon cheesemanii chloroplast |
75 | NC_021189 | AAAT | 3 | 8723 | 8734 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
76 | NC_021423 | AAAT | 3 | 154860 | 154871 | 12 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
77 | NC_021429 | AAAT | 3 | 59778 | 59789 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
78 | NC_021432 | AAAT | 3 | 59398 | 59409 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
79 | NC_021433 | AAAT | 3 | 59520 | 59531 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
80 | NC_021455 | AAAT | 3 | 71379 | 71390 | 12 | Prinsepia utilis plastid |
81 | NC_021618 | AAAT | 3 | 56655 | 56666 | 12 | Grateloupia taiwanensis plastid |
82 | NC_021636 | AAAT | 3 | 67679 | 67690 | 12 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
83 | NC_021646 | AAAT | 3 | 69683 | 69694 | 12 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
84 | NC_021936 | AAAT | 3 | 16276 | 16287 | 12 | Najas flexilis chloroplast |
85 | NC_000925 | AAAT | 3 | 118104 | 118115 | 12 | Porphyra purpurea chloroplast |
86 | NC_000932 | AAAT | 3 | 65126 | 65137 | 12 | Arabidopsis thaliana chloroplast |
87 | NC_001568 | AAAT | 3 | 66011 | 66022 | 12 | Epifagus virginiana chloroplast |
88 | NC_001603 | AAAT | 3 | 31062 | 31073 | 12 | Euglena gracilis chloroplast |
89 | NC_001675 | AAAT | 3 | 90333 | 90344 | 12 | Cyanophora paradoxa cyanelle |
90 | NC_001879 | AAAT | 3 | 56790 | 56801 | 12 | Nicotiana tabacum plastid |
91 | NC_002652 | AAAT | 3 | 10429 | 10440 | 12 | Euglena longa plastid |
92 | NC_002652 | AAAT | 3 | 38034 | 38045 | 12 | Euglena longa plastid |
93 | NC_002652 | AAAT | 3 | 44341 | 44352 | 12 | Euglena longa plastid |
94 | NC_002693 | AAAT | 3 | 119264 | 119275 | 12 | Oenothera elata subsp. hookeri plastid plastome I |
95 | NC_004115 | AAAT | 3 | 25949 | 25960 | 12 | Chaetosphaeridium globosum chloroplast |
96 | NC_004561 | AAAT | 3 | 56441 | 56452 | 12 | Atropa belladonna chloroplast |
97 | NC_004823 | AAAT | 3 | 12164 | 12175 | 12 | Eimeria tenella strain Penn State apicoplast |
98 | NC_004993 | AAAT | 3 | 4264 | 4275 | 12 | Calycanthus floridus var. glaucus chloroplast |
99 | NC_005087 | AAAT | 3 | 119251 | 119262 | 12 | Physcomitrella patens subsp. patens chloroplast |
100 | NC_006137 | AAAT | 3 | 29936 | 29947 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
101 | NC_006137 | AAAT | 3 | 88420 | 88431 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
102 | NC_007407 | AAAT | 3 | 65303 | 65314 | 12 | Acorus calamus plastid |
103 | NC_007500 | AAAT | 3 | 56788 | 56799 | 12 | Nicotiana sylvestris chloroplast |
104 | NC_007602 | AAAT | 3 | 6720 | 6731 | 12 | Nicotiana tomentosiformis chloroplast |
105 | NC_007758 | AAAT | 3 | 22201 | 22212 | 12 | Theileria parva strain Muguga apicoplast |
106 | NC_007932 | AAAT | 3 | 119248 | 119259 | 12 | Porphyra yezoensis chloroplast |
107 | NC_007944 | AAAT | 3 | 6504 | 6515 | 12 | Gossypium hirsutum chloroplast |
108 | NC_008097 | AAAT | 3 | 65084 | 65095 | 12 | Chara vulgaris chloroplast |
109 | NC_008097 | AAAT | 3 | 106997 | 107008 | 12 | Chara vulgaris chloroplast |
110 | NC_008100 | AAAT | 3 | 27178 | 27189 | 12 | Helicosporidium sp. ex Simulium jonesii plastid |
111 | NC_008101 | AAAT | 3 | 28492 | 28503 | 12 | Scenedesmus obliquus chloroplast |
112 | NC_008114 | AAAT | 3 | 161179 | 161190 | 12 | Pseudendoclonium akinetum chloroplast |
113 | NC_008117 | AAAT | 3 | 109995 | 110006 | 12 | Zygnema circumcarinatum chloroplast |
114 | NC_008117 | AAAT | 3 | 143921 | 143932 | 12 | Zygnema circumcarinatum chloroplast |
115 | NC_008235 | AAAT | 3 | 65487 | 65498 | 12 | Populus alba chloroplast |
116 | NC_008334 | AAAT | 3 | 31161 | 31172 | 12 | Citrus sinensis chloroplast |
117 | NC_008334 | AAAT | 3 | 72053 | 72064 | 12 | Citrus sinensis chloroplast |
118 | NC_008335 | AAAT | 3 | 4528 | 4539 | 12 | Platanus occidentalis chloroplast |
119 | NC_008336 | AAAT | 3 | 141586 | 141597 | 12 | Nandina domestica chloroplast |
120 | NC_008359 | AAAT | 3 | 46434 | 46445 | 12 | Morus indica chloroplast |
121 | NC_008372 | AAAT | 3 | 41730 | 41741 | 12 | Stigeoclonium helveticum chloroplast |
122 | NC_008372 | AAAT | 3 | 41941 | 41952 | 12 | Stigeoclonium helveticum chloroplast |
123 | NC_008372 | AAAT | 3 | 43582 | 43593 | 12 | Stigeoclonium helveticum chloroplast |
124 | NC_008372 | AAAT | 3 | 44136 | 44147 | 12 | Stigeoclonium helveticum chloroplast |
125 | NC_008372 | AAAT | 3 | 49870 | 49881 | 12 | Stigeoclonium helveticum chloroplast |
126 | NC_008372 | AAAT | 3 | 52263 | 52274 | 12 | Stigeoclonium helveticum chloroplast |
127 | NC_008372 | AAAT | 3 | 55109 | 55120 | 12 | Stigeoclonium helveticum chloroplast |
128 | NC_008372 | AAAT | 3 | 58801 | 58812 | 12 | Stigeoclonium helveticum chloroplast |
129 | NC_008372 | AAAT | 3 | 59033 | 59044 | 12 | Stigeoclonium helveticum chloroplast |
130 | NC_008372 | AAAT | 3 | 62178 | 62189 | 12 | Stigeoclonium helveticum chloroplast |
131 | NC_008372 | AAAT | 3 | 75254 | 75265 | 12 | Stigeoclonium helveticum chloroplast |
132 | NC_008372 | AAAT | 3 | 87532 | 87543 | 12 | Stigeoclonium helveticum chloroplast |
133 | NC_008372 | AAAT | 3 | 90434 | 90445 | 12 | Stigeoclonium helveticum chloroplast |
134 | NC_008372 | AAAT | 3 | 90605 | 90616 | 12 | Stigeoclonium helveticum chloroplast |
135 | NC_008372 | AAAT | 3 | 93090 | 93101 | 12 | Stigeoclonium helveticum chloroplast |
136 | NC_008372 | AAAT | 3 | 93149 | 93160 | 12 | Stigeoclonium helveticum chloroplast |
137 | NC_008372 | AAAT | 3 | 93334 | 93345 | 12 | Stigeoclonium helveticum chloroplast |
138 | NC_008372 | AAAT | 3 | 97341 | 97352 | 12 | Stigeoclonium helveticum chloroplast |
139 | NC_008372 | AAAT | 3 | 98161 | 98172 | 12 | Stigeoclonium helveticum chloroplast |
140 | NC_008372 | AAAT | 3 | 118377 | 118388 | 12 | Stigeoclonium helveticum chloroplast |
141 | NC_008372 | AAAT | 3 | 118541 | 118552 | 12 | Stigeoclonium helveticum chloroplast |
142 | NC_008372 | AAAT | 3 | 124834 | 124845 | 12 | Stigeoclonium helveticum chloroplast |
143 | NC_008372 | AAAT | 3 | 124982 | 124993 | 12 | Stigeoclonium helveticum chloroplast |
144 | NC_008372 | AAAT | 3 | 132256 | 132267 | 12 | Stigeoclonium helveticum chloroplast |
145 | NC_008372 | AAAT | 3 | 142171 | 142182 | 12 | Stigeoclonium helveticum chloroplast |
146 | NC_008372 | AAAT | 3 | 143059 | 143070 | 12 | Stigeoclonium helveticum chloroplast |
147 | NC_008372 | AAAT | 3 | 149828 | 149839 | 12 | Stigeoclonium helveticum chloroplast |
148 | NC_008372 | AAAT | 3 | 158852 | 158863 | 12 | Stigeoclonium helveticum chloroplast |
149 | NC_008372 | AAAT | 3 | 160581 | 160592 | 12 | Stigeoclonium helveticum chloroplast |
150 | NC_008372 | AAAT | 3 | 160842 | 160853 | 12 | Stigeoclonium helveticum chloroplast |
151 | NC_008372 | AAAT | 3 | 165299 | 165310 | 12 | Stigeoclonium helveticum chloroplast |
152 | NC_008372 | AAAT | 3 | 171864 | 171875 | 12 | Stigeoclonium helveticum chloroplast |
153 | NC_008372 | AAAT | 3 | 190158 | 190169 | 12 | Stigeoclonium helveticum chloroplast |
154 | NC_008372 | AAAT | 3 | 205734 | 205745 | 12 | Stigeoclonium helveticum chloroplast |
155 | NC_008372 | AAAT | 3 | 207469 | 207480 | 12 | Stigeoclonium helveticum chloroplast |
156 | NC_008372 | AAAT | 3 | 219157 | 219168 | 12 | Stigeoclonium helveticum chloroplast |
157 | NC_008372 | AAAT | 3 | 219193 | 219204 | 12 | Stigeoclonium helveticum chloroplast |
158 | NC_008372 | AAAT | 3 | 219357 | 219368 | 12 | Stigeoclonium helveticum chloroplast |
159 | NC_008456 | AAAT | 3 | 73336 | 73347 | 12 | Drimys granadensis chloroplast |
160 | NC_008456 | AAAT | 3 | 85457 | 85468 | 12 | Drimys granadensis chloroplast |
161 | NC_008535 | AAAT | 3 | 58133 | 58144 | 12 | Coffea arabica chloroplast |
162 | NC_008589 | AAAT | 3 | 100797 | 100808 | 12 | Thalassiosira pseudonana chloroplast |
163 | NC_008641 | AAAT | 3 | 6519 | 6530 | 12 | Gossypium barbadense chloroplast |
164 | NC_009143 | AAAT | 3 | 65915 | 65926 | 12 | Populus trichocarpa chloroplast |
165 | NC_009259 | AAAT | 3 | 123891 | 123902 | 12 | Phaseolus vulgaris chloroplast |
166 | NC_009267 | AAAT | 3 | 64834 | 64845 | 12 | Olimarabidopsis pumila chloroplast |
167 | NC_009267 | AAAT | 3 | 67395 | 67406 | 12 | Olimarabidopsis pumila chloroplast |
168 | NC_009269 | AAAT | 3 | 66922 | 66933 | 12 | Barbarea verna chloroplast |
169 | NC_009272 | AAAT | 3 | 63557 | 63568 | 12 | Draba nemorosa chloroplast |
170 | NC_009273 | AAAT | 3 | 35330 | 35341 | 12 | Lepidium virginicum chloroplast |
171 | NC_009273 | AAAT | 3 | 64897 | 64908 | 12 | Lepidium virginicum chloroplast |
172 | NC_009598 | AAAT | 3 | 70630 | 70641 | 12 | Chloranthus spicatus chloroplast |
173 | NC_009600 | AAAT | 3 | 134749 | 134760 | 12 | Illicium oligandrum chloroplast |
174 | NC_009601 | AAAT | 3 | 8910 | 8921 | 12 | Dioscorea elephantipes chloroplast |
175 | NC_009681 | AAAT | 3 | 14432 | 14443 | 12 | Leptosira terrestris chloroplast |
176 | NC_009681 | AAAT | 3 | 67601 | 67612 | 12 | Leptosira terrestris chloroplast |
177 | NC_009681 | AAAT | 3 | 85961 | 85972 | 12 | Leptosira terrestris chloroplast |
178 | NC_009681 | AAAT | 3 | 168305 | 168316 | 12 | Leptosira terrestris chloroplast |
179 | NC_009765 | AAAT | 3 | 1839 | 1850 | 12 | Cuscuta gronovii chloroplast |
180 | NC_009949 | AAAT | 3 | 1849 | 1860 | 12 | Cuscuta obtusiflora chloroplast |
181 | NC_009963 | AAAT | 3 | 50261 | 50272 | 12 | Cuscuta exaltata chloroplast |
182 | NC_010093 | AAAT | 3 | 64979 | 64990 | 12 | Acorus americanus chloroplast |
183 | NC_010323 | AAAT | 3 | 72145 | 72156 | 12 | Carica papaya chloroplast |
184 | NC_010361 | AAAT | 3 | 118671 | 118682 | 12 | Oenothera biennis chloroplast |
185 | NC_010442 | AAAT | 3 | 131878 | 131889 | 12 | Trachelium caeruleum chloroplast |
186 | NC_010601 | AAAT | 3 | 1937 | 1948 | 12 | Guizotia abyssinica chloroplast |
187 | NC_011031 | AAAT | 3 | 181506 | 181517 | 12 | Oedogonium cardiacum chloroplast |
188 | NC_011600 | AAAT | 3 | 38142 | 38153 | 12 | Vaucheria litorea chloroplast |
189 | NC_012224 | AAAT | 3 | 33404 | 33415 | 12 | Jatropha curcas chloroplast |
190 | NC_012224 | AAAT | 3 | 71253 | 71264 | 12 | Jatropha curcas chloroplast |
191 | NC_013498 | AAAT | 3 | 23903 | 23914 | 12 | Ectocarpus siliculosus chloroplast |