Chloroplast Motifs - Perfect AGAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014346 | AGAA | 3 | 64576 | 64587 | 12 | Floydiella terrestris chloroplast |
2 | NC_014589 | AGAA | 3 | 21403 | 21414 | 12 | Cathaya argyrophylla chloroplast |
3 | NC_015803 | AGAA | 3 | 71002 | 71013 | 12 | Indocalamus longiauritus plastid |
4 | NC_015817 | AGAA | 3 | 70957 | 70968 | 12 | Phyllostachys edulis chloroplast |
5 | NC_015820 | AGAA | 3 | 70999 | 71010 | 12 | Acidosasa purpurea chloroplast |
6 | NC_015826 | AGAA | 3 | 70965 | 70976 | 12 | Phyllostachys nigra var. henonis chloroplast |
7 | NC_015830 | AGAA | 3 | 70712 | 70723 | 12 | Bambusa emeiensis chloroplast |
8 | NC_015831 | AGAA | 3 | 70734 | 70745 | 12 | Ferrocalamus rimosivaginus plastid |
9 | NC_015990 | AGAA | 3 | 69565 | 69576 | 12 | Panicum virgatum chloroplast |
10 | NC_016065 | AGAA | 3 | 81854 | 81865 | 12 | Taiwania cryptomerioides chloroplast DNA |
11 | NC_016069 | AGAA | 3 | 19186 | 19197 | 12 | Picea morrisonicola chloroplast |
12 | NC_016677 | AGAA | 3 | 69781 | 69792 | 12 | Leersia tisserantii plastid |
13 | NC_016699 | AGAA | 3 | 70962 | 70973 | 12 | Phyllostachys propinqua chloroplast |
14 | NC_016718 | AGAA | 3 | 69858 | 69869 | 12 | Rhynchoryza subulata plastid |
15 | NC_016729 | AGAA | 3 | 112427 | 112438 | 12 | Silene conica chloroplast |
16 | NC_016736 | AGAA | 3 | 24521 | 24532 | 12 | Ricinus communis chloroplast |
17 | NC_016927 | AGAA | 3 | 68367 | 68378 | 12 | Oryza meridionalis chloroplast |
18 | NC_017006 | AGAA | 3 | 3812 | 3823 | 12 | Mankyua chejuensis chloroplast |
19 | NC_017006 | AGAA | 3 | 69239 | 69250 | 12 | Mankyua chejuensis chloroplast |
20 | NC_017835 | AGAA | 3 | 68357 | 68368 | 12 | Oryza rufipogon chloroplast |
21 | NC_018541 | AGAA | 3 | 118112 | 118123 | 12 | Elodea canadensis chloroplast |
22 | NC_019616 | AGAA | 3 | 126977 | 126988 | 12 | Vaccinium macrocarpon plastid |
23 | NC_019648 | AGAA | 3 | 67842 | 67853 | 12 | Festuca altissima plastid |
24 | NC_019649 | AGAA | 3 | 66226 | 66237 | 12 | Festuca ovina plastid |
25 | NC_019650 | AGAA | 3 | 67933 | 67944 | 12 | Festuca pratensis plastid |
26 | NC_020319 | AGAA | 3 | 44208 | 44219 | 12 | Cycas revoluta chloroplast |
27 | NC_020341 | AGAA | 3 | 70359 | 70370 | 12 | Arundinaria gigantea chloroplast |
28 | NC_021372 | AGAA | 3 | 70983 | 70994 | 12 | Pharus latifolius chloroplast |
29 | NC_021441 | AGAA | 3 | 80891 | 80902 | 12 | Taiwania flousiana chloroplast |
30 | NC_021760 | AGAA | 3 | 68847 | 68858 | 12 | Triticum monococcum chloroplast |
31 | NC_021761 | AGAA | 3 | 68618 | 68629 | 12 | Secale cereale chloroplast |
32 | NC_021762 | AGAA | 3 | 68526 | 68537 | 12 | Triticum urartu chloroplast |
33 | NC_022133 | AGAA | 3 | 67632 | 67643 | 12 | Aegilops tauschii chloroplast |
34 | NC_022135 | AGAA | 3 | 67359 | 67370 | 12 | Aegilops speltoides isolate SPE0661 chloroplast |
35 | NC_000927 | AGAA | 3 | 50394 | 50405 | 12 | Nephroselmis olivacea chloroplast |
36 | NC_001320 | AGAA | 3 | 68356 | 68367 | 12 | Oryza sativa Japonica Group plastid |
37 | NC_001666 | AGAA | 3 | 70272 | 70283 | 12 | Zea mays chloroplast |
38 | NC_001865 | AGAA | 3 | 113759 | 113770 | 12 | Chlorella vulgaris chloroplast |
39 | NC_002186 | AGAA | 3 | 13921 | 13932 | 12 | Mesostigma viride chloroplast |
40 | NC_002762 | AGAA | 3 | 68245 | 68256 | 12 | Triticum aestivum chloroplast |
41 | NC_003386 | AGAA | 3 | 85013 | 85024 | 12 | Psilotum nudum chloroplast |
42 | NC_003386 | AGAA | 3 | 103134 | 103145 | 12 | Psilotum nudum chloroplast |
43 | NC_004799 | AGAA | 3 | 47049 | 47060 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
44 | NC_005878 | AGAA | 3 | 67802 | 67813 | 12 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
45 | NC_005878 | AGAA | 3 | 132520 | 132531 | 12 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
46 | NC_005973 | AGAA | 3 | 68286 | 68297 | 12 | Oryza nivara chloroplast |
47 | NC_006084 | AGAA | 3 | 6176 | 6187 | 12 | Saccharum hybrid cultivar NCo 310 chloroplast |
48 | NC_006084 | AGAA | 3 | 70894 | 70905 | 12 | Saccharum hybrid cultivar NCo 310 chloroplast |
49 | NC_008155 | AGAA | 3 | 68307 | 68318 | 12 | Oryza sativa Indica Group chloroplast |
50 | NC_008590 | AGAA | 3 | 68964 | 68975 | 12 | Hordeum vulgare subsp. vulgare chloroplast |
51 | NC_008591 | AGAA | 3 | 68880 | 68891 | 12 | Agrostis stolonifera chloroplast |
52 | NC_008602 | AGAA | 3 | 71093 | 71104 | 12 | Sorghum bicolor chloroplast |
53 | NC_008829 | AGAA | 3 | 31148 | 31159 | 12 | Angiopteris evecta chloroplast |
54 | NC_011032 | AGAA | 3 | 67266 | 67277 | 12 | Brachypodium distachyon chloroplast |
55 | NC_011713 | AGAA | 3 | 68532 | 68543 | 12 | Festuca arundinacea chloroplast |
56 | NC_011713 | AGAA | 3 | 109981 | 109992 | 12 | Festuca arundinacea chloroplast |
57 | NC_012615 | AGAA | 3 | 33363 | 33374 | 12 | Megaleranthis saniculifolia chloroplast |
58 | NC_012818 | AGAA | 3 | 108199 | 108210 | 12 | Alsophila spinulosa chloroplast |
59 | NC_012927 | AGAA | 3 | 70612 | 70623 | 12 | Bambusa oldhamii chloroplast |
60 | NC_013088 | AGAA | 3 | 70714 | 70725 | 12 | Dendrocalamus latiflorus chloroplast |
61 | NC_013273 | AGAA | 3 | 70632 | 70643 | 12 | Coix lacryma-jobi chloroplast |
62 | NC_013823 | AGAA | 3 | 60700 | 60711 | 12 | Typha latifolia chloroplast |
63 | NC_013823 | AGAA | 3 | 63151 | 63162 | 12 | Typha latifolia chloroplast |