Chloroplast Motifs - Perfect TCT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_016471 | TCT | 6 | 66963 | 66980 | 18 | Neottia nidus-avis plastid |
2 | NC_002652 | TCT | 6 | 46774 | 46791 | 18 | Euglena longa plastid |
3 | NC_007407 | TCT | 6 | 128224 | 128241 | 18 | Acorus calamus plastid |
4 | NC_010093 | TCT | 6 | 127894 | 127911 | 18 | Acorus americanus chloroplast |
5 | NC_010433 | TCT | 6 | 133568 | 133585 | 18 | Manihot esculenta chloroplast |
6 | NC_010433 | TCT | 6 | 133595 | 133612 | 18 | Manihot esculenta chloroplast |
7 | NC_021438 | TCT | 5 | 108030 | 108044 | 15 | Gnetum montanum chloroplast |
8 | NC_006861 | TCT | 5 | 93111 | 93125 | 15 | Huperzia lucidula chloroplast |
9 | NC_011942 | TCT | 5 | 50430 | 50444 | 15 | Gnetum parvifolium chloroplast |
10 | NC_014674 | TCT | 4 | 127665 | 127676 | 12 | Castanea mollissima chloroplast |
11 | NC_015803 | TCT | 4 | 83187 | 83198 | 12 | Indocalamus longiauritus plastid |
12 | NC_015817 | TCT | 4 | 83139 | 83150 | 12 | Phyllostachys edulis chloroplast |
13 | NC_015820 | TCT | 4 | 83199 | 83210 | 12 | Acidosasa purpurea chloroplast |
14 | NC_015826 | TCT | 4 | 83148 | 83159 | 12 | Phyllostachys nigra var. henonis chloroplast |
15 | NC_015831 | TCT | 4 | 83017 | 83028 | 12 | Ferrocalamus rimosivaginus plastid |
16 | NC_016471 | TCT | 4 | 8130 | 8141 | 12 | Neottia nidus-avis plastid |
17 | NC_016699 | TCT | 4 | 83141 | 83152 | 12 | Phyllostachys propinqua chloroplast |
18 | NC_016708 | TCT | 4 | 2234 | 2245 | 12 | Millettia pinnata chloroplast |
19 | NC_016718 | TCT | 4 | 81954 | 81965 | 12 | Rhynchoryza subulata plastid |
20 | NC_016733 | TCT | 4 | 90450 | 90461 | 12 | Pedinomonas minor chloroplast |
21 | NC_016736 | TCT | 4 | 68690 | 68701 | 12 | Ricinus communis chloroplast |
22 | NC_016927 | TCT | 4 | 80530 | 80541 | 12 | Oryza meridionalis chloroplast |
23 | NC_016986 | TCT | 4 | 14449 | 14460 | 12 | Ginkgo biloba chloroplast |
24 | NC_017609 | TCT | 4 | 121283 | 121294 | 12 | Phalaenopsis equestris chloroplast |
25 | NC_017835 | TCT | 4 | 80519 | 80530 | 12 | Oryza rufipogon chloroplast |
26 | NC_018114 | TCT | 4 | 15466 | 15477 | 12 | Erycina pusilla chloroplast |
27 | NC_019616 | TCT | 4 | 83921 | 83932 | 12 | Vaccinium macrocarpon plastid |
28 | NC_020152 | TCT | 4 | 128007 | 128018 | 12 | Quercus rubra plastid |
29 | NC_020341 | TCT | 4 | 82558 | 82569 | 12 | Arundinaria gigantea chloroplast |
30 | NC_020363 | TCT | 4 | 33756 | 33767 | 12 | Zingiber spectabile plastid |
31 | NC_021432 | TCT | 4 | 128837 | 128848 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
32 | NC_021438 | TCT | 4 | 51500 | 51511 | 12 | Gnetum montanum chloroplast |
33 | NC_021438 | TCT | 4 | 108009 | 108020 | 12 | Gnetum montanum chloroplast |
34 | NC_021645 | TCT | 4 | 2116 | 2127 | 12 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
35 | NC_021646 | TCT | 4 | 2110 | 2121 | 12 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
36 | NC_001320 | TCT | 4 | 80517 | 80528 | 12 | Oryza sativa Japonica Group plastid |
37 | NC_004543 | TCT | 4 | 40938 | 40949 | 12 | Anthoceros formosae chloroplast |
38 | NC_004543 | TCT | 4 | 59471 | 59482 | 12 | Anthoceros formosae chloroplast |
39 | NC_004766 | TCT | 4 | 6147 | 6158 | 12 | Adiantum capillus-veneris chloroplast |
40 | NC_004799 | TCT | 4 | 24359 | 24370 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
41 | NC_005086 | TCT | 4 | 21564 | 21575 | 12 | Amborella trichopoda chloroplast |
42 | NC_005973 | TCT | 4 | 80469 | 80480 | 12 | Oryza nivara chloroplast |
43 | NC_007144 | TCT | 4 | 3024 | 3035 | 12 | Cucumis sativus chloroplast |
44 | NC_007499 | TCT | 4 | 121371 | 121382 | 12 | Phalaenopsis aphrodite subsp. formosana chloroplast |
45 | NC_007942 | TCT | 4 | 2123 | 2134 | 12 | Glycine max chloroplast |
46 | NC_008155 | TCT | 4 | 80472 | 80483 | 12 | Oryza sativa Indica Group chloroplast |
47 | NC_008372 | TCT | 4 | 72965 | 72976 | 12 | Stigeoclonium helveticum chloroplast |
48 | NC_008372 | TCT | 4 | 150717 | 150728 | 12 | Stigeoclonium helveticum chloroplast |
49 | NC_008456 | TCT | 4 | 24019 | 24030 | 12 | Drimys granadensis chloroplast |
50 | NC_008589 | TCT | 4 | 87737 | 87748 | 12 | Thalassiosira pseudonana chloroplast |
51 | NC_008788 | TCT | 4 | 145843 | 145854 | 12 | Nuphar advena chloroplast |
52 | NC_008822 | TCT | 4 | 48844 | 48855 | 12 | Chlorokybus atmophyticus chloroplast |
53 | NC_008829 | TCT | 4 | 81975 | 81986 | 12 | Angiopteris evecta chloroplast |
54 | NC_009601 | TCT | 4 | 1790 | 1801 | 12 | Dioscorea elephantipes chloroplast |
55 | NC_009601 | TCT | 4 | 89001 | 89012 | 12 | Dioscorea elephantipes chloroplast |
56 | NC_010442 | TCT | 4 | 145566 | 145577 | 12 | Trachelium caeruleum chloroplast |
57 | NC_010654 | TCT | 4 | 97958 | 97969 | 12 | Welwitschia mirabilis chloroplast |
58 | NC_011031 | TCT | 4 | 8428 | 8439 | 12 | Oedogonium cardiacum chloroplast |
59 | NC_011600 | TCT | 4 | 105048 | 105059 | 12 | Vaucheria litorea chloroplast |
60 | NC_011828 | TCT | 4 | 89015 | 89026 | 12 | Trifolium subterraneum chloroplast |
61 | NC_011942 | TCT | 4 | 50409 | 50420 | 12 | Gnetum parvifolium chloroplast |
62 | NC_013088 | TCT | 4 | 82916 | 82927 | 12 | Dendrocalamus latiflorus chloroplast |
63 | NC_014056 | TCT | 4 | 14665 | 14676 | 12 | Oncidium Gower Ramsey chloroplast |