Chloroplast Motifs - Perfect TAAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | TAAA | 6 | 143406 | 143429 | 24 | Zygnema circumcarinatum chloroplast |
2 | NC_021425 | TAAA | 5 | 46875 | 46894 | 20 | Tetracentron sinense chloroplast |
3 | NC_014674 | TAAA | 4 | 219 | 234 | 16 | Castanea mollissima chloroplast |
4 | NC_016927 | TAAA | 4 | 4153 | 4168 | 16 | Oryza meridionalis chloroplast |
5 | NC_017835 | TAAA | 4 | 4153 | 4168 | 16 | Oryza rufipogon chloroplast |
6 | NC_020018 | TAAA | 4 | 53838 | 53853 | 16 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
7 | NC_020152 | TAAA | 4 | 237 | 252 | 16 | Quercus rubra plastid |
8 | NC_021449 | TAAA | 4 | 137904 | 137919 | 16 | Utricularia gibba chloroplast |
9 | NC_001320 | TAAA | 4 | 4152 | 4167 | 16 | Oryza sativa Japonica Group plastid |
10 | NC_005973 | TAAA | 4 | 4151 | 4166 | 16 | Oryza nivara chloroplast |
11 | NC_008097 | TAAA | 4 | 103861 | 103876 | 16 | Chara vulgaris chloroplast |
12 | NC_008155 | TAAA | 4 | 4152 | 4167 | 16 | Oryza sativa Indica Group chloroplast |
13 | NC_009267 | TAAA | 4 | 62906 | 62921 | 16 | Olimarabidopsis pumila chloroplast |
14 | NC_009270 | TAAA | 4 | 62740 | 62755 | 16 | Capsella bursa-pastoris chloroplast |
15 | NC_010323 | TAAA | 4 | 364 | 379 | 16 | Carica papaya chloroplast |
16 | NC_011163 | TAAA | 4 | 13084 | 13099 | 16 | Cicer arietinum chloroplast |
17 | NC_011163 | TAAA | 4 | 52199 | 52214 | 16 | Cicer arietinum chloroplast |
18 | NC_011087 | TAAA | 3 | 880681 | 880692 | 12 | Paulinella chromatophora chromatophore |
19 | NC_014674 | TAAA | 3 | 4675 | 4686 | 12 | Castanea mollissima chloroplast |
20 | NC_014675 | TAAA | 3 | 20054 | 20065 | 12 | Isoetes flaccida chloroplast |
21 | NC_014675 | TAAA | 3 | 24839 | 24850 | 12 | Isoetes flaccida chloroplast |
22 | NC_014675 | TAAA | 3 | 87127 | 87138 | 12 | Isoetes flaccida chloroplast |
23 | NC_015113 | TAAA | 3 | 155 | 166 | 12 | Anthriscus cerefolium chloroplast |
24 | NC_015113 | TAAA | 3 | 68071 | 68082 | 12 | Anthriscus cerefolium chloroplast |
25 | NC_015139 | TAAA | 3 | 45583 | 45594 | 12 | Brassica rapa subsp. pekinensis chloroplast |
26 | NC_015204 | TAAA | 3 | 119081 | 119092 | 12 | Gossypium thurberi chloroplast |
27 | NC_015308 | TAAA | 3 | 9744 | 9755 | 12 | Hevea brasiliensis chloroplast |
28 | NC_015608 | TAAA | 3 | 9317 | 9328 | 12 | Olea woodiana subsp. woodiana chloroplast |
29 | NC_015623 | TAAA | 3 | 9314 | 9325 | 12 | Olea europaea subsp. maroccana chloroplast |
30 | NC_015891 | TAAA | 3 | 84256 | 84267 | 12 | Spirodela polyrhiza chloroplast |
31 | NC_015892 | TAAA | 3 | 46815 | 46826 | 12 | Magnolia kwangsiensis chloroplast |
32 | NC_015899 | TAAA | 3 | 10017 | 10028 | 12 | Wolffia australiana chloroplast |
33 | NC_015983 | TAAA | 3 | 71099 | 71110 | 12 | Cucumis melo subsp. melo chloroplast |
34 | NC_016068 | TAAA | 3 | 436 | 447 | 12 | Nicotiana undulata chloroplast |
35 | NC_016433 | TAAA | 3 | 43049 | 43060 | 12 | Sesamum indicum chloroplast |
36 | NC_016727 | TAAA | 3 | 73505 | 73516 | 12 | Silene vulgaris chloroplast |
37 | NC_016732 | TAAA | 3 | 27742 | 27753 | 12 | Dunaliella salina chloroplast |
38 | NC_016732 | TAAA | 3 | 48897 | 48908 | 12 | Dunaliella salina chloroplast |
39 | NC_016733 | TAAA | 3 | 22548 | 22559 | 12 | Pedinomonas minor chloroplast |
40 | NC_016734 | TAAA | 3 | 45525 | 45536 | 12 | Brassica napus chloroplast |
41 | NC_016735 | TAAA | 3 | 50421 | 50432 | 12 | Fucus vesiculosus chloroplast |
42 | NC_016735 | TAAA | 3 | 112429 | 112440 | 12 | Fucus vesiculosus chloroplast |
43 | NC_016736 | TAAA | 3 | 70216 | 70227 | 12 | Ricinus communis chloroplast |
44 | NC_018051 | TAAA | 3 | 28613 | 28624 | 12 | Vigna unguiculata chloroplast |
45 | NC_018357 | TAAA | 3 | 46892 | 46903 | 12 | Magnolia denudata chloroplast |
46 | NC_018565 | TAAA | 3 | 46285 | 46296 | 12 | Pachycladon enysii chloroplast |
47 | NC_018565 | TAAA | 3 | 62829 | 62840 | 12 | Pachycladon enysii chloroplast |
48 | NC_020018 | TAAA | 3 | 48259 | 48270 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
49 | NC_020098 | TAAA | 3 | 49474 | 49485 | 12 | Tectona grandis chloroplast |
50 | NC_020316 | TAAA | 3 | 46989 | 47000 | 12 | Magnolia officinalis chloroplast |
51 | NC_020317 | TAAA | 3 | 46985 | 46996 | 12 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
52 | NC_020318 | TAAA | 3 | 46627 | 46638 | 12 | Magnolia grandiflora voucher NJ016 chloroplast |
53 | NC_020366 | TAAA | 3 | 84209 | 84220 | 12 | Bismarckia nobilis plastid |
54 | NC_020431 | TAAA | 3 | 47802 | 47813 | 12 | Salvia miltiorrhiza chloroplast |
55 | NC_020438 | TAAA | 3 | 149830 | 149841 | 12 | Gonium pectorale chloroplast |
56 | NC_020438 | TAAA | 3 | 212687 | 212698 | 12 | Gonium pectorale chloroplast |
57 | NC_020460 | TAAA | 3 | 60388 | 60399 | 12 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
58 | NC_021075 | TAAA | 3 | 3583 | 3594 | 12 | Calliarthron tuberculosum chloroplast |
59 | NC_021102 | TAAA | 3 | 45833 | 45844 | 12 | Pachycladon cheesemanii chloroplast |
60 | NC_021189 | TAAA | 3 | 6524 | 6535 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
61 | NC_021189 | TAAA | 3 | 116089 | 116100 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
62 | NC_021426 | TAAA | 3 | 48040 | 48051 | 12 | Trochodendron aralioides chloroplast |
63 | NC_021429 | TAAA | 3 | 1431 | 1442 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
64 | NC_021449 | TAAA | 3 | 6371 | 6382 | 12 | Utricularia gibba chloroplast |
65 | NC_021449 | TAAA | 3 | 137921 | 137932 | 12 | Utricularia gibba chloroplast |
66 | NC_021455 | TAAA | 3 | 121935 | 121946 | 12 | Prinsepia utilis plastid |
67 | NC_021636 | TAAA | 3 | 24353 | 24364 | 12 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
68 | NC_021637 | TAAA | 3 | 21267 | 21278 | 12 | Phaeocystis globosa strain Pg-G(A) chloroplast |
69 | NC_021646 | TAAA | 3 | 24315 | 24326 | 12 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
70 | NC_021647 | TAAA | 3 | 24364 | 24375 | 12 | Glycine canescens voucher CSIRO:G1232 chloroplast |
71 | NC_021648 | TAAA | 3 | 24365 | 24376 | 12 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
72 | NC_021649 | TAAA | 3 | 24362 | 24373 | 12 | Glycine falcata voucher CSIRO:G1718 chloroplast |
73 | NC_021650 | TAAA | 3 | 24362 | 24373 | 12 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
74 | NC_021936 | TAAA | 3 | 18894 | 18905 | 12 | Najas flexilis chloroplast |
75 | NC_000925 | TAAA | 3 | 85230 | 85241 | 12 | Porphyra purpurea chloroplast |
76 | NC_000925 | TAAA | 3 | 114326 | 114337 | 12 | Porphyra purpurea chloroplast |
77 | NC_000932 | TAAA | 3 | 6372 | 6383 | 12 | Arabidopsis thaliana chloroplast |
78 | NC_000932 | TAAA | 3 | 46444 | 46455 | 12 | Arabidopsis thaliana chloroplast |
79 | NC_000932 | TAAA | 3 | 63194 | 63205 | 12 | Arabidopsis thaliana chloroplast |
80 | NC_001319 | TAAA | 3 | 70571 | 70582 | 12 | Marchantia polymorpha chloroplast |
81 | NC_001603 | TAAA | 3 | 114705 | 114716 | 12 | Euglena gracilis chloroplast |
82 | NC_001675 | TAAA | 3 | 58256 | 58267 | 12 | Cyanophora paradoxa cyanelle |
83 | NC_001675 | TAAA | 3 | 94708 | 94719 | 12 | Cyanophora paradoxa cyanelle |
84 | NC_001840 | TAAA | 3 | 33890 | 33901 | 12 | Cyanidium caldarium chloroplast |
85 | NC_001840 | TAAA | 3 | 43647 | 43658 | 12 | Cyanidium caldarium chloroplast |
86 | NC_001879 | TAAA | 3 | 426 | 437 | 12 | Nicotiana tabacum plastid |
87 | NC_002186 | TAAA | 3 | 102841 | 102852 | 12 | Mesostigma viride chloroplast |
88 | NC_002652 | TAAA | 3 | 60316 | 60327 | 12 | Euglena longa plastid |
89 | NC_004115 | TAAA | 3 | 57466 | 57477 | 12 | Chaetosphaeridium globosum chloroplast |
90 | NC_004543 | TAAA | 3 | 46863 | 46874 | 12 | Anthoceros formosae chloroplast |
91 | NC_005087 | TAAA | 3 | 8941 | 8952 | 12 | Physcomitrella patens subsp. patens chloroplast |
92 | NC_005087 | TAAA | 3 | 48443 | 48454 | 12 | Physcomitrella patens subsp. patens chloroplast |
93 | NC_006861 | TAAA | 3 | 5204 | 5215 | 12 | Huperzia lucidula chloroplast |
94 | NC_006861 | TAAA | 3 | 74798 | 74809 | 12 | Huperzia lucidula chloroplast |
95 | NC_007500 | TAAA | 3 | 426 | 437 | 12 | Nicotiana sylvestris chloroplast |
96 | NC_007602 | TAAA | 3 | 396 | 407 | 12 | Nicotiana tomentosiformis chloroplast |
97 | NC_007758 | TAAA | 3 | 2436 | 2447 | 12 | Theileria parva strain Muguga apicoplast |
98 | NC_007932 | TAAA | 3 | 115073 | 115084 | 12 | Porphyra yezoensis chloroplast |
99 | NC_008114 | TAAA | 3 | 167141 | 167152 | 12 | Pseudendoclonium akinetum chloroplast |
100 | NC_008325 | TAAA | 3 | 160 | 171 | 12 | Daucus carota chloroplast |
101 | NC_008326 | TAAA | 3 | 46958 | 46969 | 12 | Liriodendron tulipifera chloroplast |
102 | NC_008334 | TAAA | 3 | 6850 | 6861 | 12 | Citrus sinensis chloroplast |
103 | NC_008334 | TAAA | 3 | 45792 | 45803 | 12 | Citrus sinensis chloroplast |
104 | NC_008372 | TAAA | 3 | 208685 | 208696 | 12 | Stigeoclonium helveticum chloroplast |
105 | NC_008641 | TAAA | 3 | 119175 | 119186 | 12 | Gossypium barbadense chloroplast |
106 | NC_008822 | TAAA | 3 | 135461 | 135472 | 12 | Chlorokybus atmophyticus chloroplast |
107 | NC_008829 | TAAA | 3 | 22271 | 22282 | 12 | Angiopteris evecta chloroplast |
108 | NC_009267 | TAAA | 3 | 46057 | 46068 | 12 | Olimarabidopsis pumila chloroplast |
109 | NC_009268 | TAAA | 3 | 45672 | 45683 | 12 | Arabis hirsuta chloroplast |
110 | NC_009268 | TAAA | 3 | 62221 | 62232 | 12 | Arabis hirsuta chloroplast |
111 | NC_009269 | TAAA | 3 | 46159 | 46170 | 12 | Barbarea verna chloroplast |
112 | NC_009269 | TAAA | 3 | 63282 | 63293 | 12 | Barbarea verna chloroplast |
113 | NC_009270 | TAAA | 3 | 45719 | 45730 | 12 | Capsella bursa-pastoris chloroplast |
114 | NC_009271 | TAAA | 3 | 62968 | 62979 | 12 | Crucihimalaya wallichii chloroplast |
115 | NC_009273 | TAAA | 3 | 62986 | 62997 | 12 | Lepidium virginicum chloroplast |
116 | NC_009274 | TAAA | 3 | 61487 | 61498 | 12 | Lobularia maritima chloroplast |
117 | NC_009275 | TAAA | 3 | 45992 | 46003 | 12 | Nasturtium officinale chloroplast |
118 | NC_009275 | TAAA | 3 | 63189 | 63200 | 12 | Nasturtium officinale chloroplast |
119 | NC_009573 | TAAA | 3 | 62781 | 62792 | 12 | Rhodomonas salina chloroplast |
120 | NC_009599 | TAAA | 3 | 4636 | 4647 | 12 | Buxus microphylla chloroplast |
121 | NC_009599 | TAAA | 3 | 47024 | 47035 | 12 | Buxus microphylla chloroplast |
122 | NC_009600 | TAAA | 3 | 144252 | 144263 | 12 | Illicium oligandrum chloroplast |
123 | NC_009681 | TAAA | 3 | 26309 | 26320 | 12 | Leptosira terrestris chloroplast |
124 | NC_009681 | TAAA | 3 | 149131 | 149142 | 12 | Leptosira terrestris chloroplast |
125 | NC_009765 | TAAA | 3 | 36436 | 36447 | 12 | Cuscuta gronovii chloroplast |
126 | NC_009766 | TAAA | 3 | 19044 | 19055 | 12 | Cuscuta reflexa chloroplast |
127 | NC_009766 | TAAA | 3 | 48309 | 48320 | 12 | Cuscuta reflexa chloroplast |
128 | NC_009766 | TAAA | 3 | 55008 | 55019 | 12 | Cuscuta reflexa chloroplast |
129 | NC_009808 | TAAA | 3 | 69136 | 69147 | 12 | Ipomoea purpurea chloroplast |
130 | NC_009808 | TAAA | 3 | 79043 | 79054 | 12 | Ipomoea purpurea chloroplast |
131 | NC_009949 | TAAA | 3 | 43921 | 43932 | 12 | Cuscuta obtusiflora chloroplast |
132 | NC_009963 | TAAA | 3 | 40380 | 40391 | 12 | Cuscuta exaltata chloroplast |
133 | NC_009963 | TAAA | 3 | 57113 | 57124 | 12 | Cuscuta exaltata chloroplast |
134 | NC_010109 | TAAA | 3 | 29306 | 29317 | 12 | Lemna minor chloroplast |
135 | NC_010323 | TAAA | 3 | 341 | 352 | 12 | Carica papaya chloroplast |
136 | NC_010323 | TAAA | 3 | 54841 | 54852 | 12 | Carica papaya chloroplast |
137 | NC_010323 | TAAA | 3 | 115164 | 115175 | 12 | Carica papaya chloroplast |
138 | NC_010433 | TAAA | 3 | 15080 | 15091 | 12 | Manihot esculenta chloroplast |
139 | NC_010548 | TAAA | 3 | 63714 | 63725 | 12 | Cryptomeria japonica chloroplast |
140 | NC_011031 | TAAA | 3 | 102961 | 102972 | 12 | Oedogonium cardiacum chloroplast |
141 | NC_011031 | TAAA | 3 | 138488 | 138499 | 12 | Oedogonium cardiacum chloroplast |
142 | NC_012052 | TAAA | 3 | 14602 | 14613 | 12 | Syntrichia ruralis chloroplast |
143 | NC_012052 | TAAA | 3 | 49184 | 49195 | 12 | Syntrichia ruralis chloroplast |
144 | NC_012052 | TAAA | 3 | 84692 | 84703 | 12 | Syntrichia ruralis chloroplast |
145 | NC_012224 | TAAA | 3 | 47570 | 47581 | 12 | Jatropha curcas chloroplast |
146 | NC_012224 | TAAA | 3 | 69430 | 69441 | 12 | Jatropha curcas chloroplast |
147 | NC_012224 | TAAA | 3 | 71267 | 71278 | 12 | Jatropha curcas chloroplast |
148 | NC_012615 | TAAA | 3 | 76388 | 76399 | 12 | Megaleranthis saniculifolia chloroplast |
149 | NC_012978 | TAAA | 3 | 19108 | 19119 | 12 | Parachlorella kessleri chloroplast |
150 | NC_013359 | TAAA | 3 | 88577 | 88588 | 12 | Bryopsis hypnoides chloroplast |
151 | NC_013843 | TAAA | 3 | 28637 | 28648 | 12 | Vigna radiata chloroplast |