All Repeats of Flammulina velutipes strain 4019-20 mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_021373 | (TTTATT)3ttttaacttttttattaactcacttaatttatttaaataaattat(TTTA)3 | c | 239 | 313 | 75 | Design Primer |
2 | NC_021373 | (ATA)7 | p3 | 731 | 751 | 21 | Design Primer |
3 | NC_021373 | (AATT)3 | p4 | 1700 | 1711 | 12 | Design Primer |
4 | NC_021373 | (TTAA)3attaat(TTAAA)3 | c | 3157 | 3189 | 33 | Design Primer |
5 | NC_021373 | (TTTTAA)3 | p6 | 3643 | 3660 | 18 | Design Primer |
6 | NC_021373 | (TAA)4 | p3 | 5133 | 5144 | 12 | Design Primer |
7 | NC_021373 | (TTC)11 | p3 | 6202 | 6234 | 33 | Design Primer |
8 | NC_021373 | (A)11 | p1 | 7155 | 7165 | 11 | Design Primer |
9 | NC_021373 | (A)10 | p1 | 9688 | 9697 | 10 | Design Primer |
10 | NC_021373 | (ATTT)3 | p4 | 10857 | 10868 | 12 | Design Primer |
11 | NC_021373 | (ATT)4 | p3 | 12359 | 12370 | 12 | Design Primer |
12 | NC_021373 | (T)10 | p1 | 12722 | 12731 | 10 | Design Primer |
13 | NC_021373 | (A)10 | p1 | 13116 | 13125 | 10 | Design Primer |
14 | NC_021373 | (T)11 | p1 | 13366 | 13376 | 11 | Design Primer |
15 | NC_021373 | (T)10 | p1 | 13553 | 13562 | 10 | Design Primer |
16 | NC_021373 | (AATTT)3 | p5 | 13669 | 13683 | 15 | Design Primer |
17 | NC_021373 | (TAA)4 | p3 | 14360 | 14371 | 12 | Design Primer |
18 | NC_021373 | (AACTTT)6 | p6 | 16626 | 16661 | 36 | Design Primer |
19 | NC_021373 | (AATT)3aaataatattaaatatactaa(AAT)4 | c | 16821 | 16865 | 45 | Design Primer |
20 | NC_021373 | (A)10 | p1 | 17137 | 17146 | 10 | Design Primer |
21 | NC_021373 | (AAT)6 | p3 | 17360 | 17377 | 18 | Design Primer |
22 | NC_021373 | (AAGGA)3 | p5 | 17652 | 17666 | 15 | Design Primer |
23 | NC_021373 | (AAAAT)3 | p5 | 19293 | 19307 | 15 | Design Primer |
24 | NC_021373 | (T)10 | p1 | 19636 | 19645 | 10 | Design Primer |
25 | NC_021373 | (AATT)3 | p4 | 22029 | 22040 | 12 | Design Primer |
26 | NC_021373 | (TAATAC)6 | p6 | 22552 | 22587 | 36 | Design Primer |
27 | NC_021373 | (TTATTC)5 | p6 | 22753 | 22782 | 30 | Design Primer |
28 | NC_021373 | (GTTA)3attaatttaattaatttatttaaacaaaaatatctaattggaatttttaaatttaaatttaatcttaaataaacagcctt(TTTAA)5(ATTT)3 | c | 23067 | 23195 | 129 | Design Primer |
29 | NC_021373 | (TTATT)4 | p5 | 23471 | 23490 | 20 | Design Primer |
30 | NC_021373 | (TATAAA)4 | p6 | 25167 | 25190 | 24 | Design Primer |
31 | NC_021373 | (A)10 | p1 | 26118 | 26127 | 10 | Design Primer |
32 | NC_021373 | (A)10 | p1 | 26296 | 26305 | 10 | Design Primer |
33 | NC_021373 | (TAAT)3 | p4 | 26485 | 26496 | 12 | Design Primer |
34 | NC_021373 | (T)10ataaagtaatattttaatcttgtataatttttatctataaaatattaaattgtatatagtattaacagtttaaataataatctatg(TTTTAA)3ttaaattttaatttaattttaatcttaattctttatatttataaaaaaagtaaatataaaat(A)10 | c | 26990 | 27175 | 186 | Design Primer |
35 | NC_021373 | (AAT)4 | p3 | 27754 | 27765 | 12 | Design Primer |
36 | NC_021373 | (ATA)4 | p3 | 28079 | 28090 | 12 | Design Primer |
37 | NC_021373 | (TAA)4tattaaaaatttaaataaatctaataatatatctaataaaaatatagttataaataatgatatatta(AAT)4 | c | 28350 | 28440 | 91 | Design Primer |
38 | NC_021373 | (ATA)5 | p3 | 28919 | 28933 | 15 | Design Primer |
39 | NC_021373 | (ATCTAA)3 | p6 | 29163 | 29180 | 18 | Design Primer |
40 | NC_021373 | (A)10ttgaattatttaataaaaaatcaaaaatgtctaattttttaaataataacaatattaaaaattatggctttgggtataattttttaactaatgagt(ATA)4 | c | 29302 | 29419 | 118 | Design Primer |
41 | NC_021373 | (TAA)4 | p3 | 29700 | 29711 | 12 | Design Primer |
42 | NC_021373 | (TAA)4ttataataataatt(ATA)7atttattatattctttaaaatttaaattatttaaattgaataaatttattggttttttaaataatttctttaagaatgttaataaacaaataaatactat(TAA)7 | c | 29883 | 30050 | 168 | Design Primer |
43 | NC_021373 | (AAT)5aaaattattaatagaatatctaatcctgtttatatgtttaaaaataataatcaaattaataataatttaaatattaacacaat(TAA)5 | c | 30325 | 30437 | 113 | Design Primer |
44 | NC_021373 | (AAT)6 | p3 | 30931 | 30948 | 18 | Design Primer |
45 | NC_021373 | (TAA)5aattaataattttaataatttaactcaa(AAT)6 | c | 31782 | 31842 | 61 | Design Primer |
46 | NC_021373 | (T)10 | p1 | 32580 | 32589 | 10 | Design Primer |
47 | NC_021373 | (TAA)5ttaatataata(ATT)4 | c | 32904 | 32941 | 38 | Design Primer |
48 | NC_021373 | (AATTGT)4aa(TTGAAG)3 | c | 33528 | 33571 | 44 | Design Primer |
49 | NC_021373 | (AAATT)3 | p5 | 33994 | 34008 | 15 | Design Primer |
50 | NC_021373 | (A)10 | p1 | 34596 | 34605 | 10 | Design Primer |
51 | NC_021373 | (TAAT)3tatttactaaaaaaaataataaaataaactaaaaaaat(A)10taaatagtcaattaaaaaaaataaaaagattaaaagaagataataaaaattgtaaaaagcatataaaatataac(A)11 | c | 35232 | 35376 | 145 | Design Primer |
52 | NC_021373 | (TTAA)3actaatataaattaggtacagttaattc(TTAA)3 | c | 35648 | 35699 | 52 | Design Primer |
53 | NC_021373 | (TTTA)3 | p4 | 37464 | 37475 | 12 | Design Primer |
54 | NC_021373 | (TATT)3 | p4 | 37648 | 37659 | 12 | Design Primer |
55 | NC_021373 | (TAAA)3 | p4 | 37988 | 37999 | 12 | Design Primer |
56 | NC_021373 | (ATAATT)3 | p6 | 38488 | 38505 | 18 | Design Primer |
57 | NC_021373 | (T)12attttatattattttatttttatattattataattttattttaat(ATTA)3 | c | 38672 | 38740 | 69 | Design Primer |
58 | NC_021373 | (TTAT)3ttaaa(TATT)3taattctttatataa(ATTT)4 | c | 39503 | 39562 | 60 | Design Primer |
59 | NC_021373 | (A)10gatacctttaag(TGTAAT)3 | c | 39963 | 40002 | 40 | Design Primer |
60 | NC_021373 | (TAAA)3 | p4 | 40396 | 40407 | 12 | Design Primer |
61 | NC_021373 | (AATTA)3 | p5 | 40821 | 40835 | 15 | Design Primer |
62 | NC_021373 | (TTTTA)3 | p5 | 41847 | 41861 | 15 | Design Primer |
63 | NC_021373 | (TTA)4 | p3 | 42889 | 42900 | 12 | Design Primer |
64 | NC_021373 | (AAAT)3 | p4 | 45958 | 45969 | 12 | Design Primer |
65 | NC_021373 | (A)10 | p1 | 48752 | 48761 | 10 | Design Primer |
66 | NC_021373 | (T)10 | p1 | 49059 | 49068 | 10 | Design Primer |
67 | NC_021373 | (ATTTTT)5 | p6 | 49909 | 49938 | 30 | Design Primer |
68 | NC_021373 | (TTTA)3 | p4 | 50139 | 50150 | 12 | Design Primer |
69 | NC_021373 | (TAATCT)6 | p6 | 50763 | 50798 | 36 | Design Primer |
70 | NC_021373 | (TTTAAT)3 | p6 | 51887 | 51904 | 18 | Design Primer |
71 | NC_021373 | (TTTAT)3 | p5 | 55995 | 56009 | 15 | Design Primer |
72 | NC_021373 | (TAAT)3 | p4 | 56199 | 56210 | 12 | Design Primer |
73 | NC_021373 | (ATT)4 | p3 | 56606 | 56617 | 12 | Design Primer |
74 | NC_021373 | (AAT)4 | p3 | 58147 | 58158 | 12 | Design Primer |
75 | NC_021373 | (A)10 | p1 | 58812 | 58821 | 10 | Design Primer |
76 | NC_021373 | (TTATTT)3 | p6 | 60285 | 60302 | 18 | Design Primer |
77 | NC_021373 | (TTA)5 | p3 | 60683 | 60697 | 15 | Design Primer |
78 | NC_021373 | (GATTAA)6 | p6 | 60941 | 60976 | 36 | Design Primer |
79 | NC_021373 | (T)10 | p1 | 61503 | 61512 | 10 | Design Primer |
80 | NC_021373 | (A)10 | p1 | 61683 | 61692 | 10 | Design Primer |
81 | NC_021373 | (TTA)4tttag(TAT)4 | c | 65454 | 65482 | 29 | Design Primer |
82 | NC_021373 | (T)10 | p1 | 65663 | 65672 | 10 | Design Primer |
83 | NC_021373 | (ATT)4tgtgactatcgttaaactgttttaagtgtctaacagt(A)12 | c | 68635 | 68695 | 61 | Design Primer |
84 | NC_021373 | (A)11ttctattaaattaaatatacaaaaatcaatgaaaaaaacagaaatac(A)11 | c | 69462 | 69530 | 69 | Design Primer |
85 | NC_021373 | (AATA)3taataaatttaataattaatttaaataatcaaaagaaattatattttttatacaccca(T)10attctaaagtatgtactttttataatattaaaagtatttttttacgtgaatttaattaaatttaaccattttaaagagaaatttttaaattatttaaaa(TAT)4 | c | 70727 | 70917 | 191 | Design Primer |
86 | NC_021373 | (TTAAT)4 | p5 | 71463 | 71482 | 20 | Design Primer |
87 | NC_021373 | (A)11tataataatatactaatataataat(ATA)4 | c | 72950 | 72997 | 48 | Design Primer |
88 | NC_021373 | (T)10aatt(A)10 | c | 73223 | 73246 | 24 | Design Primer |
89 | NC_021373 | (AAT)4 | p3 | 74531 | 74542 | 12 | Design Primer |
90 | NC_021373 | (AAT)4 | p3 | 74870 | 74881 | 12 | Design Primer |
91 | NC_021373 | (ATTA)3att(TTTTA)3atatta(ATTT)3 | c | 75512 | 75559 | 48 | Design Primer |
92 | NC_021373 | (TAAA)3 | p4 | 75869 | 75880 | 12 | Design Primer |
93 | NC_021373 | (ATAA)3 | p4 | 77006 | 77017 | 12 | Design Primer |
94 | NC_021373 | (TTA)4attaatttaatttatacatctt(TTA)4 | c | 78716 | 78761 | 46 | Design Primer |
95 | NC_021373 | (T)11 | p1 | 79037 | 79047 | 11 | Design Primer |
96 | NC_021373 | (TAA)4 | p3 | 79682 | 79693 | 12 | Design Primer |
97 | NC_021373 | (TAT)6 | p3 | 80374 | 80391 | 18 | Design Primer |
98 | NC_021373 | (A)10tactataattataaactgattataaaaattatttaattattttattgaaaaacctttatattattatatatttttaaaatatgataaaaatatcc(T)12caaaaaataacaaataaaatataatatcatatcaaaatttattca(ATT)4 | c | 80901 | 81074 | 174 | Design Primer |
99 | NC_021373 | (TTAA)3 | p4 | 82163 | 82174 | 12 | Design Primer |
100 | NC_021373 | (A)10 | p1 | 83848 | 83857 | 10 | Design Primer |
101 | NC_021373 | (TTAGTT)3ttaaaattaaatctagtttatttttattactattttatttaagtattatttctagttaaaaaa(TATT)3 | c | 84766 | 84858 | 93 | Design Primer |
102 | NC_021373 | (TTAAA)3 | p5 | 85909 | 85923 | 15 | Design Primer |
103 | NC_021373 | (TTTAA)3 | p5 | 86153 | 86167 | 15 | Design Primer |
104 | NC_021373 | (T)12 | p1 | 86717 | 86728 | 12 | Design Primer |
105 | NC_021373 | (TATT)3 | p4 | 87014 | 87025 | 12 | Design Primer |
106 | NC_021373 | (TTAT)3ttaaatcttaaaattaaaaaaaatctcacataaaaaaaaataaaaagtagcaaatt(A)10 | c | 87259 | 87336 | 78 | Design Primer |
107 | NC_021373 | (ATT)4 | p3 | 87499 | 87510 | 12 | Design Primer |
108 | NC_021373 | (AATT)3 | p4 | 88114 | 88125 | 12 | Design Primer |
109 | NC_021373 | (AATTA)3(ATT)4* | c* | 88415 | 88437 | 23 | Design Primer |