Compound Repeats of Castanea mollissima chloroplast
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_014674 | (AAAT)3(AATA)3 | c | 4661 | 4684 | 24 | Design Primer |
| 2 | NC_014674 | (A)11tgattaatgattgttgttgtttcaagaacaatcataataaaggcaatttctattcctatcatac(AGAAT)3ccgagtgtcatttcttaattattttattctttctttttttttattccagtaaagtaaaaagtaaatggaat(A)11 | c | 10056 | 10227 | 172 | Design Primer |
| 3 | NC_014674 | (T)10gaatataatgaacctatcctctcttctctattcatatttcatattc(A)13tatcaaaatggatcattaatccaagaccagaatattcggaggactcttctgaacaaacaaataattgtcagcaacgttgtttc(T)11caaatccaaaaaatttttattaatttatacgtaggtcatcgattcagcattggataaaaaagaggggttgaaatactcataatttttttccaataaat(AATA)3 | c | 14044 | 14316 | 273 | Design Primer |
| 4 | NC_014674 | (C)13(A)10 | c | 24789 | 24811 | 23 | Design Primer |
| 5 | NC_014674 | (T)10caatattgtgtttgttttaagatactatacaaacaatcgaagatatatatccaatccaaagagaaaggtaagtattta(T)10aggaaaggggattattaaataaaagaggattccagatacaagtacaaaaacgaatat(C)10 | c | 30232 | 30396 | 165 | Design Primer |
| 6 | NC_014674 | (A)10tgaaagggaggggtcaaacaaacttcttatatttaactatttaaaaatgaaattaaaaa(AT)6taattaaataattttattatactatttatttatatttataata(TAT)4atattattatttataaatagtagaaattttctataatatttataatactattttgataataatatttttttgataataacttatt(TTA)4 | c | 40792 | 41024 | 233 | Design Primer |
| 7 | NC_014674 | (A)12tgaaaaagagaaggccgtaatccagatcataatgaaagattcctccgctttcgttcggaaagataaaacc(A)11 | c | 52226 | 52318 | 93 | Design Primer |
| 8 | NC_014674 | (T)12atttatcctttttatttctattttttattgtttctatttttatatattata(TATT)3 | c | 54229 | 54303 | 75 | Design Primer |
| 9 | NC_014674 | (A)13tagagtaaggttttattagtatagaaaaaattttcatgatatctgatcaatagaa(AT)7 | c | 69149 | 69230 | 82 | Design Primer |
| 10 | NC_014674 | (A)10gaatcaatgtgtagattgcagccctcattc(T)11 | c | 77225 | 77275 | 51 | Design Primer |
| 11 | NC_014674 | (T)14atttgctctttcactgcgaaggggctaagtaaaaaaagaaatattgtttgtccaaaac(A)10gaaacctataattttg(T)11 | c | 87120 | 87228 | 109 | Design Primer |
| 12 | NC_014674 | (A)12t(A)11 | c | 118716 | 118739 | 24 | Design Primer |
| 13 | NC_014674 | (A)11gaaaaaaaagaaattgtattctttcta(T)11cgttcctattcttctttcttttctg(A)10 | c | 127228 | 127311 | 84 | Design Primer |