All Repeats of Lentinula edodes mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_018365 | (AACAAA)4 | p6 | 677 | 700 | 24 | Design Primer |
2 | NC_018365 | (TATT)3 | p4 | 2010 | 2021 | 12 | Design Primer |
3 | NC_018365 | (TAT)4 | p3 | 4162 | 4173 | 12 | Design Primer |
4 | NC_018365 | (T)12 | p1 | 5195 | 5206 | 12 | Design Primer |
5 | NC_018365 | (A)13 | p1 | 5597 | 5609 | 13 | Design Primer |
6 | NC_018365 | (T)10 | p1 | 7082 | 7091 | 10 | Design Primer |
7 | NC_018365 | (A)15 | p1 | 8312 | 8326 | 15 | Design Primer |
8 | NC_018365 | (TAAAA)3 | p5 | 11297 | 11311 | 15 | Design Primer |
9 | NC_018365 | (TTAT)3 | p4 | 12633 | 12644 | 12 | Design Primer |
10 | NC_018365 | (TCT)6 | p3 | 13570 | 13587 | 18 | Design Primer |
11 | NC_018365 | (ATAAT)4 | p5 | 14583 | 14602 | 20 | Design Primer |
12 | NC_018365 | (G)12 | p1 | 15134 | 15145 | 12 | Design Primer |
13 | NC_018365 | (A)11 | p1 | 15682 | 15692 | 11 | Design Primer |
14 | NC_018365 | (GTAGCA)3gtagt(AGTAGA)4 | c | 18227 | 18273 | 47 | Design Primer |
15 | NC_018365 | (TATAAT)3 | p6 | 20100 | 20117 | 18 | Design Primer |
16 | NC_018365 | (C)10 | p1 | 20433 | 20442 | 10 | Design Primer |
17 | NC_018365 | (TACTTA)3 | p6 | 20975 | 20992 | 18 | Design Primer |
18 | NC_018365 | (AAAAG)4 | p5 | 22937 | 22956 | 20 | Design Primer |
19 | NC_018365 | (TTAA)3 | p4 | 23101 | 23112 | 12 | Design Primer |
20 | NC_018365 | (TTATA)11 | p5 | 23287 | 23341 | 55 | Design Primer |
21 | NC_018365 | (TTTATT)5 | p6 | 25371 | 25400 | 30 | Design Primer |
22 | NC_018365 | (C)11 | p1 | 29813 | 29823 | 11 | Design Primer |
23 | NC_018365 | (TATT)3 | p4 | 31996 | 32007 | 12 | Design Primer |
24 | NC_018365 | (G)14 | p1 | 33114 | 33127 | 14 | Design Primer |
25 | NC_018365 | (A)11 | p1 | 33412 | 33422 | 11 | Design Primer |
26 | NC_018365 | (C)27 | p1 | 33664 | 33690 | 27 | Design Primer |
27 | NC_018365 | (ATTAA)5ataagaaagg(T)11 | c | 35236 | 35281 | 46 | Design Primer |
28 | NC_018365 | (G)14 | p1 | 35674 | 35687 | 14 | Design Primer |
29 | NC_018365 | (TAAAA)3ataaaataaattaaaattaaattacact(A)10 | c | 37136 | 37188 | 53 | Design Primer |
30 | NC_018365 | (TACATA)3 | p6 | 37609 | 37626 | 18 | Design Primer |
31 | NC_018365 | (TAT)4 | p3 | 37771 | 37782 | 12 | Design Primer |
32 | NC_018365 | (A)10 | p1 | 38901 | 38910 | 10 | Design Primer |
33 | NC_018365 | (TTA)4 | p3 | 42669 | 42680 | 12 | Design Primer |
34 | NC_018365 | (TTTTAC)3 | p6 | 43845 | 43862 | 18 | Design Primer |
35 | NC_018365 | (TATAT)3 | p5 | 45265 | 45279 | 15 | Design Primer |
36 | NC_018365 | (TATAAG)5 | p6 | 47124 | 47153 | 30 | Design Primer |
37 | NC_018365 | (A)10 | p1 | 47605 | 47614 | 10 | Design Primer |
38 | NC_018365 | (ATA)4 | p3 | 49194 | 49205 | 12 | Design Primer |
39 | NC_018365 | (C)11tc(CCCT)3 | c | 49434 | 49458 | 25 | Design Primer |
40 | NC_018365 | (A)11 | p1 | 49873 | 49883 | 11 | Design Primer |
41 | NC_018365 | (ATATTT)4atatatgtatttata(TTATAT)5ttttttaaggaaagcgatcctaaggtaaacctttagtataatttacttcctgaagtaaaacattttatt(AAGGA)3 | c | 50019 | 50171 | 153 | Design Primer |
42 | NC_018365 | (T)10 | p1 | 52891 | 52900 | 10 | Design Primer |
43 | NC_018365 | (T)10 | p1 | 54307 | 54316 | 10 | Design Primer |
44 | NC_018365 | (AAAAC)3 | p5 | 56981 | 56995 | 15 | Design Primer |
45 | NC_018365 | (A)10caagactt(TTATAA)3 | c | 57370 | 57405 | 36 | Design Primer |
46 | NC_018365 | (AAAT)3 | p4 | 57770 | 57781 | 12 | Design Primer |
47 | NC_018365 | (ACAA)3 | p4 | 58346 | 58357 | 12 | Design Primer |
48 | NC_018365 | (AATAT)5(AAATT)5(TAAA)3* | c* | 58497 | 58557 | 61 | Design Primer |
49 | NC_018365 | (A)11 | p1 | 60028 | 60038 | 11 | Design Primer |
50 | NC_018365 | (AGATT)3 | p5 | 61131 | 61145 | 15 | Design Primer |
51 | NC_018365 | (ATA)4 | p3 | 62138 | 62149 | 12 | Design Primer |
52 | NC_018365 | (TATT)3 | p4 | 63312 | 63323 | 12 | Design Primer |
53 | NC_018365 | (TTA)4 | p3 | 63438 | 63449 | 12 | Design Primer |
54 | NC_018365 | (TTA)5 | p3 | 63846 | 63860 | 15 | Design Primer |
55 | NC_018365 | (A)11 | p1 | 66143 | 66153 | 11 | Design Primer |
56 | NC_018365 | (TAAA)3 | p4 | 66520 | 66531 | 12 | Design Primer |
57 | NC_018365 | (A)10 | p1 | 69140 | 69149 | 10 | Design Primer |
58 | NC_018365 | (G)14 | p1 | 69824 | 69837 | 14 | Design Primer |
59 | NC_018365 | (G)10 | p1 | 70320 | 70329 | 10 | Design Primer |
60 | NC_018365 | (ATTAT)3 | p5 | 71105 | 71119 | 15 | Design Primer |
61 | NC_018365 | (A)10 | p1 | 71400 | 71409 | 10 | Design Primer |
62 | NC_018365 | (AAACC)3 | p5 | 71622 | 71636 | 15 | Design Primer |
63 | NC_018365 | (CCTC)4 | p4 | 71968 | 71983 | 16 | Design Primer |
64 | NC_018365 | (TAA)5 | p3 | 72637 | 72651 | 15 | Design Primer |
65 | NC_018365 | (A)10 | p1 | 73784 | 73793 | 10 | Design Primer |
66 | NC_018365 | (G)14 | p1 | 74040 | 74053 | 14 | Design Primer |
67 | NC_018365 | (AATAA)4aaaaaaatattctt(A)10 | c | 74844 | 74887 | 44 | Design Primer |
68 | NC_018365 | (A)10 | p1 | 75252 | 75261 | 10 | Design Primer |
69 | NC_018365 | (T)10 | p1 | 79599 | 79608 | 10 | Design Primer |
70 | NC_018365 | (GAGTAG)4c(GAGTAG)10gat(TAGGAG)4 | c | 79755 | 79866 | 112 | Design Primer |
71 | NC_018365 | (AAC)4cacaccacagccattaacacattaacca(AAC)5 | c | 80514 | 80568 | 55 | Design Primer |
72 | NC_018365 | (TACTA)11 | p5 | 80864 | 80918 | 55 | Design Primer |
73 | NC_018365 | (AAATGT)3 | p6 | 82837 | 82854 | 18 | Design Primer |
74 | NC_018365 | (T)11 | p1 | 85585 | 85595 | 11 | Design Primer |
75 | NC_018365 | (TACTCC)4taa(TCCTAC)3 | c | 86055 | 86099 | 45 | Design Primer |
76 | NC_018365 | (G)11tctcc(T)11 | c | 86711 | 86737 | 27 | Design Primer |
77 | NC_018365 | (TCCC)3 | p4 | 88473 | 88484 | 12 | Design Primer |
78 | NC_018365 | (A)11 | p1 | 89061 | 89071 | 11 | Design Primer |
79 | NC_018365 | (TTATAT)4 | p6 | 89334 | 89357 | 24 | Design Primer |
80 | NC_018365 | (CCTC)3 | p4 | 92080 | 92091 | 12 | Design Primer |
81 | NC_018365 | (G)11 | p1 | 92512 | 92522 | 11 | Design Primer |
82 | NC_018365 | (TAA)5 | p3 | 92728 | 92742 | 15 | Design Primer |
83 | NC_018365 | (A)10 | p1 | 94117 | 94126 | 10 | Design Primer |
84 | NC_018365 | (TATAA)11ttaaaagcctaagagacttgtactcagg(T)11 | c | 95475 | 95568 | 94 | Design Primer |
85 | NC_018365 | (G)12 | p1 | 95686 | 95697 | 12 | Design Primer |
86 | NC_018365 | (CAA)4 | p3 | 96674 | 96685 | 12 | Design Primer |
87 | NC_018365 | (TAAATT)3 | p6 | 103644 | 103661 | 18 | Design Primer |
88 | NC_018365 | (A)11 | p1 | 103790 | 103800 | 11 | Design Primer |
89 | NC_018365 | (AAAGA)3 | p5 | 107132 | 107146 | 15 | Design Primer |
90 | NC_018365 | (TATAGA)5 | p6 | 107622 | 107651 | 30 | Design Primer |
91 | NC_018365 | (ATA)4 | p3 | 108382 | 108393 | 12 | Design Primer |
92 | NC_018365 | (AATAA)3aaataaaataaatataaatttatttaaaaaataaaaat(TAAAA)3 | c | 109545 | 109612 | 68 | Design Primer |
93 | NC_018365 | (A)10gaaaaatagaataagcaaggttttaattttaataaaaaggttagaggcaagattaaaaaagggagggggcg(ATA)4gtaacacaaaatgttttgtttttaacaataaaagagcactactaaatactaagcacagttta(TATTT)4 | c | 109839 | 110013 | 175 | Design Primer |
94 | NC_018365 | (TAA)4aaggagctgtt(TTTATA)3tttaataagaaaacaaaataaggggtttgaaaaaaaatgatacaatatat(ATA)4 | c | 110839 | 110941 | 103 | Design Primer |
95 | NC_018365 | (AGTAA)4 | p5 | 111805 | 111824 | 20 | Design Primer |
96 | NC_018365 | (A)11 | p1 | 112498 | 112508 | 11 | Design Primer |
97 | NC_018365 | (AGGG)3 | p4 | 114203 | 114214 | 12 | Design Primer |
98 | NC_018365 | (CTCC)3 | p4 | 114451 | 114462 | 12 | Design Primer |
99 | NC_018365 | (G)11 | p1 | 114650 | 114660 | 11 | Design Primer |
100 | NC_018365 | (ATTTAG)3 | p6 | 116050 | 116067 | 18 | Design Primer |
101 | NC_018365 | (A)10 | p1 | 117076 | 117085 | 10 | Design Primer |
102 | NC_018365 | (AAAT)4 | p4 | 119313 | 119328 | 16 | Design Primer |
103 | NC_018365 | (A)10 | p1 | 120953 | 120962 | 10 | Design Primer |
104 | NC_018365 | (CCCT)3tcctccttaggagggaa(G)10 | c | 121356 | 121394 | 39 | Design Primer |