Tetra-nucleotide Repeats of Agrobacterium vitis S4 plasmid pAtS4e
Total Repeats: 1547
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1501 | NC_011981 | ACCT | 2 | 8 | 611259 | 611266 | 25 % | 25 % | 0 % | 50 % | 222102925 |
1502 | NC_011981 | TCAA | 2 | 8 | 611681 | 611688 | 50 % | 25 % | 0 % | 25 % | 222102926 |
1503 | NC_011981 | AGCA | 2 | 8 | 612660 | 612667 | 50 % | 0 % | 25 % | 25 % | 222102927 |
1504 | NC_011981 | GATG | 2 | 8 | 612879 | 612886 | 25 % | 25 % | 50 % | 0 % | 222102927 |
1505 | NC_011981 | CGAT | 2 | 8 | 613123 | 613130 | 25 % | 25 % | 25 % | 25 % | 222102927 |
1506 | NC_011981 | AGGC | 2 | 8 | 613257 | 613264 | 25 % | 0 % | 50 % | 25 % | 222102927 |
1507 | NC_011981 | CCCT | 2 | 8 | 613335 | 613342 | 0 % | 25 % | 0 % | 75 % | 222102927 |
1508 | NC_011981 | GATG | 2 | 8 | 613390 | 613397 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
1509 | NC_011981 | TCGT | 2 | 8 | 613599 | 613606 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
1510 | NC_011981 | GCCC | 2 | 8 | 613870 | 613877 | 0 % | 0 % | 25 % | 75 % | 222102928 |
1511 | NC_011981 | CCGA | 2 | 8 | 614032 | 614039 | 25 % | 0 % | 25 % | 50 % | 222102928 |
1512 | NC_011981 | GCGT | 3 | 12 | 614607 | 614618 | 0 % | 25 % | 50 % | 25 % | 222102928 |
1513 | NC_011981 | CGCA | 2 | 8 | 614803 | 614810 | 25 % | 0 % | 25 % | 50 % | 222102928 |
1514 | NC_011981 | CGCC | 2 | 8 | 615074 | 615081 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
1515 | NC_011981 | CTGA | 2 | 8 | 615282 | 615289 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
1516 | NC_011981 | GCGG | 2 | 8 | 615603 | 615610 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
1517 | NC_011981 | AATC | 2 | 8 | 615634 | 615641 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
1518 | NC_011981 | TCAA | 2 | 8 | 615753 | 615760 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
1519 | NC_011981 | CGCT | 2 | 8 | 617045 | 617052 | 0 % | 25 % | 25 % | 50 % | 222102930 |
1520 | NC_011981 | GGGC | 2 | 8 | 617057 | 617064 | 0 % | 0 % | 75 % | 25 % | 222102930 |
1521 | NC_011981 | AGCG | 2 | 8 | 617334 | 617341 | 25 % | 0 % | 50 % | 25 % | 222102931 |
1522 | NC_011981 | AGCC | 2 | 8 | 617682 | 617689 | 25 % | 0 % | 25 % | 50 % | 222102931 |
1523 | NC_011981 | ATGG | 2 | 8 | 618251 | 618258 | 25 % | 25 % | 50 % | 0 % | 222102931 |
1524 | NC_011981 | CCTC | 2 | 8 | 618913 | 618920 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
1525 | NC_011981 | GCAC | 2 | 8 | 619130 | 619137 | 25 % | 0 % | 25 % | 50 % | 222102932 |
1526 | NC_011981 | TGCA | 2 | 8 | 619945 | 619952 | 25 % | 25 % | 25 % | 25 % | 222102932 |
1527 | NC_011981 | TGCC | 2 | 8 | 619968 | 619975 | 0 % | 25 % | 25 % | 50 % | 222102932 |
1528 | NC_011981 | GCTG | 2 | 8 | 619985 | 619992 | 0 % | 25 % | 50 % | 25 % | 222102932 |
1529 | NC_011981 | CCTC | 2 | 8 | 620075 | 620082 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
1530 | NC_011981 | GATC | 2 | 8 | 620371 | 620378 | 25 % | 25 % | 25 % | 25 % | 222102933 |
1531 | NC_011981 | GCCA | 2 | 8 | 621011 | 621018 | 25 % | 0 % | 25 % | 50 % | 222102933 |
1532 | NC_011981 | CATC | 2 | 8 | 623275 | 623282 | 25 % | 25 % | 0 % | 50 % | 222102935 |
1533 | NC_011981 | TGCC | 2 | 8 | 623976 | 623983 | 0 % | 25 % | 25 % | 50 % | 222102935 |
1534 | NC_011981 | GCTG | 2 | 8 | 624055 | 624062 | 0 % | 25 % | 50 % | 25 % | 222102935 |
1535 | NC_011981 | TGGC | 2 | 8 | 624064 | 624071 | 0 % | 25 % | 50 % | 25 % | 222102935 |
1536 | NC_011981 | CCGG | 2 | 8 | 624078 | 624085 | 0 % | 0 % | 50 % | 50 % | 222102935 |
1537 | NC_011981 | GCCA | 2 | 8 | 624212 | 624219 | 25 % | 0 % | 25 % | 50 % | 222102935 |
1538 | NC_011981 | AGTC | 2 | 8 | 625909 | 625916 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
1539 | NC_011981 | ATGG | 2 | 8 | 626384 | 626391 | 25 % | 25 % | 50 % | 0 % | 222102937 |
1540 | NC_011981 | GACG | 2 | 8 | 626573 | 626580 | 25 % | 0 % | 50 % | 25 % | 222102937 |
1541 | NC_011981 | GCGT | 2 | 8 | 626824 | 626831 | 0 % | 25 % | 50 % | 25 % | 222102937 |
1542 | NC_011981 | GGTG | 2 | 8 | 626917 | 626924 | 0 % | 25 % | 75 % | 0 % | 222102937 |
1543 | NC_011981 | CAAC | 2 | 8 | 627445 | 627452 | 50 % | 0 % | 0 % | 50 % | 222102938 |
1544 | NC_011981 | CCGG | 2 | 8 | 627910 | 627917 | 0 % | 0 % | 50 % | 50 % | 222102938 |
1545 | NC_011981 | GTCC | 2 | 8 | 628652 | 628659 | 0 % | 25 % | 25 % | 50 % | 222102939 |
1546 | NC_011981 | GTCG | 2 | 8 | 629696 | 629703 | 0 % | 25 % | 50 % | 25 % | 222102940 |
1547 | NC_011981 | GCTC | 2 | 8 | 630043 | 630050 | 0 % | 25 % | 25 % | 50 % | 222102940 |