Modify Minimum Repeat Number |
---|
Repeat Summary of Shewanella putrefaciens 200 chromosome
Minimum Iterations: Mono - (6), Di - (3), Tri - (2), Tetra - (2), Penta - (2), Hexa - (2)
Genome ID | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
NC_017566 | 6483 | 5812 | 57826 | 11115 | 3092 | 1593 | 85921 |
- | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats |
Location | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
Coding | 4520 | 4565 | 49462 | 8995 | 2440 | 1378 | 71360 |
Non-Coding | 1963 | 1247 | 8364 | 2120 | 652 | 215 | 14561 |
Click on the numbers to get the respective repeats.
Here, Density refers to the number of microsatellites per every 1 kb sequence (coding/non-coding).