All Repeats of Medicago truncatula cultivar Borung plastid
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_022100 | (T)11 | p1 | 967 | 977 | 11 | Design Primer |
2 | NC_022100 | (ATTA)4taagtaatataaataactatgtttgtcatt(TA)6 | c | 2668 | 2725 | 58 | Design Primer |
3 | NC_022100 | (AATA)3 | p4 | 5234 | 5245 | 12 | Design Primer |
4 | NC_022100 | (A)11 | p1 | 7654 | 7664 | 11 | Design Primer |
5 | NC_022100 | (A)10gacaaagaaatcgaaatttcatgaccgtattgatatgaccaggaaaaaaaaatttatatacttaaa(T)10 | c | 8242 | 8327 | 86 | Design Primer |
6 | NC_022100 | (TATT)3 | p4 | 8474 | 8485 | 12 | Design Primer |
7 | NC_022100 | (T)11 | p1 | 12939 | 12949 | 11 | Design Primer |
8 | NC_022100 | (ATTT)3(T)13* | c* | 13086 | 13107 | 22 | Design Primer |
9 | NC_022100 | (A)10taagaccatcgcatttctttttttatttaaatttatttatataaaaatataaataa(AT)6aaatttatatt(TA)6 | c | 13233 | 13333 | 101 | Design Primer |
10 | NC_022100 | (T)13 | p1 | 15195 | 15207 | 13 | Design Primer |
11 | NC_022100 | (T)18 | p1 | 15996 | 16013 | 18 | Design Primer |
12 | NC_022100 | (T)10 | p1 | 16939 | 16948 | 10 | Design Primer |
13 | NC_022100 | (A)10 | p1 | 17059 | 17068 | 10 | Design Primer |
14 | NC_022100 | (AAT)4 | p3 | 28949 | 28960 | 12 | Design Primer |
15 | NC_022100 | (ATC)6 | p3 | 35080 | 35097 | 18 | Design Primer |
16 | NC_022100 | (ATTT)3 | p4 | 39376 | 39387 | 12 | Design Primer |
17 | NC_022100 | (AATA)3 | p4 | 41953 | 41964 | 12 | Design Primer |
18 | NC_022100 | (T)12 | p1 | 42169 | 42180 | 12 | Design Primer |
19 | NC_022100 | (A)13 | p1 | 43890 | 43902 | 13 | Design Primer |
20 | NC_022100 | (T)15 | p1 | 44658 | 44672 | 15 | Design Primer |
21 | NC_022100 | (AAT)4agatg(A)12gaaaaaggaatgaaatctatatatatattgaatatatatatagatagattcaaaatacaaattcgaattcagaattctatttgtattttgtataaagtat(A)10tacaaatagaattctgaattcgatataatattatctatatagtttataatttataatagg(TCAT)3 | c | 45361 | 45571 | 211 | Design Primer |
22 | NC_022100 | (A)15 | p1 | 45709 | 45723 | 15 | Design Primer |
23 | NC_022100 | (A)13 | p1 | 46771 | 46783 | 13 | Design Primer |
24 | NC_022100 | (T)10gaataatgcatatttgtagcaatgaaatactattctcctccccaaaatgattaattacaaatatctatgattgatttgattaatttatgtttttttttc(T)10 | c | 50032 | 50150 | 119 | Design Primer |
25 | NC_022100 | (T)10 | p1 | 51110 | 51119 | 10 | Design Primer |
26 | NC_022100 | (T)12 | p1 | 51272 | 51283 | 12 | Design Primer |
27 | NC_022100 | (T)14 | p1 | 51898 | 51911 | 14 | Design Primer |
28 | NC_022100 | (A)11 | p1 | 54810 | 54820 | 11 | Design Primer |
29 | NC_022100 | (A)12 | p1 | 55968 | 55979 | 12 | Design Primer |
30 | NC_022100 | (A)14taaatataaatctgcattgaatttgagtttcgattcaaaatgaaatttacttgaagagtaactc(TATT)3ttttttcgattttttagaacagtagtaggagttctagcgatcgactcgcttttttcata(T)11cata(T)11cata(T)10 | c | 58265 | 58453 | 189 | Design Primer |
31 | NC_022100 | (A)10ggatttgttttatttatattctta(T)10 | c | 58759 | 58802 | 44 | Design Primer |
32 | NC_022100 | (T)12cgaacttattctagtctaattag(A)14 | c | 59525 | 59573 | 49 | Design Primer |
33 | NC_022100 | (TTA)4 | p3 | 59980 | 59991 | 12 | Design Primer |
34 | NC_022100 | (TA)7 | p2 | 60096 | 60109 | 14 | Design Primer |
35 | NC_022100 | (T)10 | p1 | 61944 | 61953 | 10 | Design Primer |
36 | NC_022100 | (T)15 | p1 | 62604 | 62618 | 15 | Design Primer |
37 | NC_022100 | (T)10 | p1 | 62878 | 62887 | 10 | Design Primer |
38 | NC_022100 | (T)10 | p1 | 63079 | 63088 | 10 | Design Primer |
39 | NC_022100 | (T)10 | p1 | 65246 | 65255 | 10 | Design Primer |
40 | NC_022100 | (T)14 | p1 | 66280 | 66293 | 14 | Design Primer |
41 | NC_022100 | (ATC)4 | p3 | 68021 | 68032 | 12 | Design Primer |
42 | NC_022100 | (A)11 | p1 | 69128 | 69138 | 11 | Design Primer |
43 | NC_022100 | (T)10gaaattacttcattttttataaacttagtatcaaaggaaacataatatgaaatagaagagaatctattctctttctctggcg(T)10 | c | 70422 | 70523 | 102 | Design Primer |
44 | NC_022100 | (A)10 | p1 | 70762 | 70771 | 10 | Design Primer |
45 | NC_022100 | (T)10ctatttattatctataaataaatagaaataaagagagaattattgatttcattttttataccttcagc(A)10 | c | 71033 | 71120 | 88 | Design Primer |
46 | NC_022100 | (T)11 | p1 | 71868 | 71878 | 11 | Design Primer |
47 | NC_022100 | (AATTTG)3attctttttcgaagg(A)11 | c | 74108 | 74151 | 44 | Design Primer |
48 | NC_022100 | (T)12 | p1 | 74837 | 74848 | 12 | Design Primer |
49 | NC_022100 | (TAA)4(TAAT)3* | c* | 75545 | 75565 | 21 | Design Primer |
50 | NC_022100 | (AT)7 | p2 | 75883 | 75896 | 14 | Design Primer |
51 | NC_022100 | (TGAA)3 | p4 | 76879 | 76890 | 12 | Design Primer |
52 | NC_022100 | (TTAA)4 | p4 | 77085 | 77100 | 16 | Design Primer |
53 | NC_022100 | (AT)6 | p2 | 77984 | 77995 | 12 | Design Primer |
54 | NC_022100 | (T)10 | p1 | 78659 | 78668 | 10 | Design Primer |
55 | NC_022100 | (T)12 | p1 | 79221 | 79232 | 12 | Design Primer |
56 | NC_022100 | (ATT)4 | p3 | 80343 | 80354 | 12 | Design Primer |
57 | NC_022100 | (T)10accgttccgggtggtatcaagatagaactgtgtcgggatatcttatccctctctccgggaaaatggatatttccagaaaataattttaattcga(T)13 | c | 81018 | 81134 | 117 | Design Primer |
58 | NC_022100 | (TTCATT)3 | p6 | 84805 | 84822 | 18 | Design Primer |
59 | NC_022100 | (A)10gagatgaaataattaattccacaaaaaaataa(T)11 | c | 85589 | 85641 | 53 | Design Primer |
60 | NC_022100 | (T)10 | p1 | 88888 | 88897 | 10 | Design Primer |
61 | NC_022100 | (ATTT)3 | p4 | 89936 | 89947 | 12 | Design Primer |
62 | NC_022100 | (AAT)4 | p3 | 90279 | 90290 | 12 | Design Primer |
63 | NC_022100 | (TTA)4tatatattaatattattatatattaatattattatattaataataaaatccaattcaaaaagaatcca(T)11 | c | 91144 | 91234 | 91 | Design Primer |
64 | NC_022100 | (A)11 | p1 | 91862 | 91872 | 11 | Design Primer |
65 | NC_022100 | (T)11 | p1 | 92115 | 92125 | 11 | Design Primer |
66 | NC_022100 | (T)10 | p1 | 92349 | 92358 | 10 | Design Primer |
67 | NC_022100 | (A)15 | p1 | 92905 | 92919 | 15 | Design Primer |
68 | NC_022100 | (A)10 | p1 | 94254 | 94263 | 10 | Design Primer |
69 | NC_022100 | (GATA)3 | p4 | 95235 | 95246 | 12 | Design Primer |
70 | NC_022100 | (ATACA)3atatatc(A)12 | c | 99402 | 99435 | 34 | Design Primer |
71 | NC_022100 | (T)12 | p1 | 99853 | 99864 | 12 | Design Primer |
72 | NC_022100 | (T)10 | p1 | 100100 | 100109 | 10 | Design Primer |
73 | NC_022100 | (T)10caaaatttttttctttctctagactgagatcggt(A)13 | c | 107460 | 107516 | 57 | Design Primer |
74 | NC_022100 | (AAT)4tttaagataagaattttaattaagag(TTAA)3 | c | 109395 | 109444 | 50 | Design Primer |
75 | NC_022100 | (TA)6 | p2 | 109774 | 109785 | 12 | Design Primer |
76 | NC_022100 | (T)10 | p1 | 110916 | 110925 | 10 | Design Primer |
77 | NC_022100 | (T)10 | p1 | 113946 | 113955 | 10 | Design Primer |
78 | NC_022100 | (T)10caagtccagaaacctcagtatccgaagtggtaggagttagtctcatattaaaatagatccg(T)10g(A)15 | c | 116607 | 116703 | 97 | Design Primer |
79 | NC_022100 | (A)11 | p1 | 117196 | 117206 | 11 | Design Primer |
80 | NC_022100 | (GAAT)3taaatagaaataagttagatt(A)12ttagaatagaaatatttttatatttgttttctctattgta(T)14 | c | 119082 | 119180 | 99 | Design Primer |
81 | NC_022100 | (T)12 | p1 | 119416 | 119427 | 12 | Design Primer |
82 | NC_022100 | (T)11 | p1 | 120071 | 120081 | 11 | Design Primer |
83 | NC_022100 | (A)11 | p1 | 121446 | 121456 | 11 | Design Primer |
84 | NC_022100 | (A)12tttcaaatttttaatttatacgtttctctcatcaatctttttgatctttttgtaatacatatgacttcacaatgtaaaattaag(A)10 | c | 123531 | 123636 | 106 | Design Primer |