Compound Compound Repeats of Theobroma cacao chloroplast
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_014676 | (T)10attttcattttatagaaattatatattagtccataacggacgtataatactaaataaaatccaataaaacgaaatcaaactcattaaaaatcc(T)11 | c | 268 | 381 | 114 | Design Primer |
| 2 | NC_014676 | (T)13cttttttaataattaataaattattaat(TTA)4 | c | 13439 | 13491 | 53 | Design Primer |
| 3 | NC_014676 | (T)10aagt(A)11 | c | 17024 | 17048 | 25 | Design Primer |
| 4 | NC_014676 | (A)11ttcttcctaaattttctatttcgatgaaccagctcttaccagagttatatatggacaatgagggataaggaacccccccc(T)10 | c | 30082 | 30182 | 101 | Design Primer |
| 5 | NC_014676 | (T)10caatagtcttttttttctattctgaatcatgtgtctttttcctaagactgagagcggtaaagtaaataaagt(A)10 | c | 46800 | 46891 | 92 | Design Primer |
| 6 | NC_014676 | (TAGT)3ttatcagaatcaaagtcaaagcccattatgcgggctttggctttgtgacataaaatggaattgtcgaaaaagaattatgtggata(ATT)4 | c | 63089 | 63197 | 109 | Design Primer |
| 7 | NC_014676 | (T)10c(A)10 | c | 75414 | 75434 | 21 | Design Primer |
| 8 | NC_014676 | (T)12atagtgggctctttctaacttataatttctaatgaaggggctttttcttccatttt(TTAAA)3aattaaattaaagaaagatgagttttggcctgttttcctataatatagaaaaaatttgctaaactatcgcacaaacttttcattgatcta(T)10 | c | 76149 | 76331 | 183 | Design Primer |
| 9 | NC_014676 | (A)11gaattc(T)11 | c | 117303 | 117330 | 28 | Design Primer |
| 10 | NC_014676 | (A)10t(A)10 | c | 125982 | 126002 | 21 | Design Primer |