Penta-nucleotide Coding Repeats of Sinorhizobium fredii HH103 plasmid pSfHH103d partial sequence
Total Repeats: 162
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NT_187148 | GCGAT | 2 | 10 | 924 | 933 | 20 % | 20 % | 40 % | 20 % | 399995316 |
2 | NT_187148 | CAAGC | 2 | 10 | 1044 | 1053 | 40 % | 0 % | 20 % | 40 % | 399995317 |
3 | NT_187148 | TCGGC | 2 | 10 | 1266 | 1275 | 0 % | 20 % | 40 % | 40 % | 399995317 |
4 | NT_187148 | GGCGT | 2 | 10 | 1463 | 1472 | 0 % | 20 % | 60 % | 20 % | 399995317 |
5 | NT_187148 | CATCA | 2 | 10 | 3402 | 3411 | 40 % | 20 % | 0 % | 40 % | 399995319 |
6 | NT_187148 | AGATC | 2 | 10 | 4952 | 4961 | 40 % | 20 % | 20 % | 20 % | 399995321 |
7 | NT_187148 | GCCGC | 2 | 10 | 5017 | 5026 | 0 % | 0 % | 40 % | 60 % | 399995321 |
8 | NT_187148 | ACATG | 2 | 10 | 5412 | 5421 | 40 % | 20 % | 20 % | 20 % | 399995321 |
9 | NT_187148 | ATGAA | 2 | 10 | 6167 | 6176 | 60 % | 20 % | 20 % | 0 % | 399995323 |
10 | NT_187148 | CTTCG | 2 | 10 | 6428 | 6437 | 0 % | 40 % | 20 % | 40 % | 399995324 |
11 | NT_187148 | ACGGC | 2 | 10 | 6651 | 6660 | 20 % | 0 % | 40 % | 40 % | 399995324 |
12 | NT_187148 | TCGGC | 2 | 10 | 7811 | 7820 | 0 % | 20 % | 40 % | 40 % | 399995325 |
13 | NT_187148 | TCCAT | 2 | 10 | 9537 | 9546 | 20 % | 40 % | 0 % | 40 % | 399995327 |
14 | NT_187148 | TCAGG | 2 | 10 | 14077 | 14086 | 20 % | 20 % | 40 % | 20 % | 399995334 |
15 | NT_187148 | CGATC | 2 | 10 | 15105 | 15114 | 20 % | 20 % | 20 % | 40 % | 399995336 |
16 | NT_187148 | GCTCG | 2 | 10 | 20465 | 20474 | 0 % | 20 % | 40 % | 40 % | 399995340 |
17 | NT_187148 | CGAGG | 2 | 10 | 22002 | 22011 | 20 % | 0 % | 60 % | 20 % | 399995342 |
18 | NT_187148 | CGCGT | 2 | 10 | 24346 | 24355 | 0 % | 20 % | 40 % | 40 % | 399995345 |
19 | NT_187148 | AGCTG | 2 | 10 | 25369 | 25378 | 20 % | 20 % | 40 % | 20 % | 399995345 |
20 | NT_187148 | AACGG | 2 | 10 | 30431 | 30440 | 40 % | 0 % | 40 % | 20 % | 399995353 |
21 | NT_187148 | CCCCT | 2 | 10 | 30702 | 30711 | 0 % | 20 % | 0 % | 80 % | 399995353 |
22 | NT_187148 | TCCGT | 2 | 10 | 32008 | 32017 | 0 % | 40 % | 20 % | 40 % | 399995354 |
23 | NT_187148 | GAGAA | 2 | 10 | 32801 | 32810 | 60 % | 0 % | 40 % | 0 % | 399995354 |
24 | NT_187148 | CGACT | 2 | 10 | 33227 | 33236 | 20 % | 20 % | 20 % | 40 % | 399995354 |
25 | NT_187148 | CAAGC | 2 | 10 | 33482 | 33491 | 40 % | 0 % | 20 % | 40 % | 399995354 |
26 | NT_187148 | GAAGC | 2 | 10 | 33933 | 33942 | 40 % | 0 % | 40 % | 20 % | 399995355 |
27 | NT_187148 | TCGCC | 2 | 10 | 35615 | 35624 | 0 % | 20 % | 20 % | 60 % | 399995357 |
28 | NT_187148 | GTCAC | 2 | 10 | 38288 | 38297 | 20 % | 20 % | 20 % | 40 % | 399995358 |
29 | NT_187148 | GCTCG | 2 | 10 | 39346 | 39355 | 0 % | 20 % | 40 % | 40 % | 399995360 |
30 | NT_187148 | AGCCA | 2 | 10 | 42215 | 42224 | 40 % | 0 % | 20 % | 40 % | 399995364 |
31 | NT_187148 | CGAAA | 2 | 10 | 43761 | 43770 | 60 % | 0 % | 20 % | 20 % | 399995368 |
32 | NT_187148 | GCCAG | 2 | 10 | 44331 | 44340 | 20 % | 0 % | 40 % | 40 % | 399995368 |
33 | NT_187148 | GGCCC | 2 | 10 | 46458 | 46467 | 0 % | 0 % | 40 % | 60 % | 399995370 |
34 | NT_187148 | CGGCA | 2 | 10 | 48033 | 48042 | 20 % | 0 % | 40 % | 40 % | 399995374 |
35 | NT_187148 | AACGC | 2 | 10 | 48058 | 48067 | 40 % | 0 % | 20 % | 40 % | 399995374 |
36 | NT_187148 | TGGCG | 2 | 10 | 52521 | 52530 | 0 % | 20 % | 60 % | 20 % | 399995381 |
37 | NT_187148 | CCCTC | 2 | 10 | 56230 | 56239 | 0 % | 20 % | 0 % | 80 % | 399995384 |
38 | NT_187148 | TCGCC | 2 | 10 | 57013 | 57022 | 0 % | 20 % | 20 % | 60 % | 399995384 |
39 | NT_187148 | GCTCG | 2 | 10 | 57215 | 57224 | 0 % | 20 % | 40 % | 40 % | 399995385 |
40 | NT_187148 | GGCGC | 2 | 10 | 59009 | 59018 | 0 % | 0 % | 60 % | 40 % | 399995389 |
41 | NT_187148 | ACGCA | 2 | 10 | 59545 | 59554 | 40 % | 0 % | 20 % | 40 % | 399995389 |
42 | NT_187148 | GGCCA | 2 | 10 | 60083 | 60092 | 20 % | 0 % | 40 % | 40 % | 399995390 |
43 | NT_187148 | CGGAT | 2 | 10 | 60949 | 60958 | 20 % | 20 % | 40 % | 20 % | 399995391 |
44 | NT_187148 | GGGGC | 2 | 10 | 63980 | 63989 | 0 % | 0 % | 80 % | 20 % | 399995391 |
45 | NT_187148 | CGATC | 2 | 10 | 65183 | 65192 | 20 % | 20 % | 20 % | 40 % | 399995391 |
46 | NT_187148 | CGGCG | 2 | 10 | 66330 | 66339 | 0 % | 0 % | 60 % | 40 % | 399995391 |
47 | NT_187148 | GCTGC | 2 | 10 | 66813 | 66822 | 0 % | 20 % | 40 % | 40 % | 399995391 |
48 | NT_187148 | CCGCT | 2 | 10 | 69589 | 69598 | 0 % | 20 % | 20 % | 60 % | 399995392 |
49 | NT_187148 | GATCG | 2 | 10 | 71579 | 71588 | 20 % | 20 % | 40 % | 20 % | 399995395 |
50 | NT_187148 | GTGCC | 2 | 10 | 72410 | 72419 | 0 % | 20 % | 40 % | 40 % | 399995396 |
51 | NT_187148 | CCCCG | 2 | 10 | 73076 | 73085 | 0 % | 0 % | 20 % | 80 % | 399995396 |
52 | NT_187148 | AGCCG | 2 | 10 | 76347 | 76356 | 20 % | 0 % | 40 % | 40 % | 399995402 |
53 | NT_187148 | ATGCA | 2 | 10 | 76476 | 76485 | 40 % | 20 % | 20 % | 20 % | 399995402 |
54 | NT_187148 | CCAGG | 2 | 10 | 77033 | 77042 | 20 % | 0 % | 40 % | 40 % | 399995403 |
55 | NT_187148 | CATCG | 2 | 10 | 78861 | 78870 | 20 % | 20 % | 20 % | 40 % | 399995405 |
56 | NT_187148 | TTCTT | 2 | 10 | 79740 | 79749 | 0 % | 80 % | 0 % | 20 % | 399995406 |
57 | NT_187148 | CCGGA | 2 | 10 | 83722 | 83731 | 20 % | 0 % | 40 % | 40 % | 399995410 |
58 | NT_187148 | GCGTC | 2 | 10 | 85177 | 85186 | 0 % | 20 % | 40 % | 40 % | 399995411 |
59 | NT_187148 | CGGCA | 2 | 10 | 87074 | 87083 | 20 % | 0 % | 40 % | 40 % | 399995412 |
60 | NT_187148 | AGGCG | 2 | 10 | 87709 | 87718 | 20 % | 0 % | 60 % | 20 % | 399995413 |
61 | NT_187148 | CGGGC | 2 | 10 | 89127 | 89136 | 0 % | 0 % | 60 % | 40 % | 399995414 |
62 | NT_187148 | GCAGT | 2 | 10 | 89919 | 89928 | 20 % | 20 % | 40 % | 20 % | 399995414 |
63 | NT_187148 | CGCGA | 2 | 10 | 90674 | 90683 | 20 % | 0 % | 40 % | 40 % | 399995415 |
64 | NT_187148 | CCGAC | 2 | 10 | 94558 | 94567 | 20 % | 0 % | 20 % | 60 % | 399995420 |
65 | NT_187148 | GCTTC | 2 | 10 | 98961 | 98970 | 0 % | 40 % | 20 % | 40 % | 399995422 |
66 | NT_187148 | ACCGC | 2 | 10 | 99535 | 99544 | 20 % | 0 % | 20 % | 60 % | 399995423 |
67 | NT_187148 | TCGCC | 2 | 10 | 102549 | 102558 | 0 % | 20 % | 20 % | 60 % | 399995425 |
68 | NT_187148 | CGGTC | 2 | 10 | 103053 | 103062 | 0 % | 20 % | 40 % | 40 % | 399995426 |
69 | NT_187148 | GATGA | 2 | 10 | 104859 | 104868 | 40 % | 20 % | 40 % | 0 % | 399995428 |
70 | NT_187148 | CGGCC | 2 | 10 | 107388 | 107397 | 0 % | 0 % | 40 % | 60 % | 399995430 |
71 | NT_187148 | ATCAG | 2 | 10 | 109686 | 109695 | 40 % | 20 % | 20 % | 20 % | 399995430 |
72 | NT_187148 | CGACG | 2 | 10 | 110771 | 110780 | 20 % | 0 % | 40 % | 40 % | 399995432 |
73 | NT_187148 | CGGTC | 2 | 10 | 111743 | 111752 | 0 % | 20 % | 40 % | 40 % | 399995432 |
74 | NT_187148 | ACGCT | 2 | 10 | 113013 | 113022 | 20 % | 20 % | 20 % | 40 % | 399995433 |
75 | NT_187148 | CCTGG | 2 | 10 | 113160 | 113169 | 0 % | 20 % | 40 % | 40 % | 399995433 |
76 | NT_187148 | ACGTT | 2 | 10 | 114135 | 114144 | 20 % | 40 % | 20 % | 20 % | 399995434 |
77 | NT_187148 | GGCAT | 2 | 10 | 115768 | 115777 | 20 % | 20 % | 40 % | 20 % | 399995436 |
78 | NT_187148 | TCCGG | 2 | 10 | 116522 | 116531 | 0 % | 20 % | 40 % | 40 % | 399995437 |
79 | NT_187148 | AAATG | 2 | 10 | 122149 | 122158 | 60 % | 20 % | 20 % | 0 % | 399995440 |
80 | NT_187148 | AAGCA | 2 | 10 | 123641 | 123650 | 60 % | 0 % | 20 % | 20 % | 399995442 |
81 | NT_187148 | GATCG | 2 | 10 | 125170 | 125179 | 20 % | 20 % | 40 % | 20 % | 399995442 |
82 | NT_187148 | CGGCT | 2 | 10 | 129497 | 129506 | 0 % | 20 % | 40 % | 40 % | 399995449 |
83 | NT_187148 | GACGC | 2 | 10 | 131170 | 131179 | 20 % | 0 % | 40 % | 40 % | 399995451 |
84 | NT_187148 | CGATC | 2 | 10 | 133375 | 133384 | 20 % | 20 % | 20 % | 40 % | 399995451 |
85 | NT_187148 | TCAGG | 2 | 10 | 136964 | 136973 | 20 % | 20 % | 40 % | 20 % | 399995455 |
86 | NT_187148 | AGGGC | 2 | 10 | 137182 | 137191 | 20 % | 0 % | 60 % | 20 % | 399995455 |
87 | NT_187148 | CCCGG | 2 | 10 | 137200 | 137209 | 0 % | 0 % | 40 % | 60 % | 399995455 |
88 | NT_187148 | CGCTT | 2 | 10 | 137755 | 137764 | 0 % | 40 % | 20 % | 40 % | 399995456 |
89 | NT_187148 | GCATC | 2 | 10 | 138324 | 138333 | 20 % | 20 % | 20 % | 40 % | 399995456 |
90 | NT_187148 | CTCGC | 2 | 10 | 139584 | 139593 | 0 % | 20 % | 20 % | 60 % | 399995459 |
91 | NT_187148 | CGGTA | 2 | 10 | 141726 | 141735 | 20 % | 20 % | 40 % | 20 % | 399995461 |
92 | NT_187148 | CGTCG | 2 | 10 | 142150 | 142159 | 0 % | 20 % | 40 % | 40 % | 399995461 |
93 | NT_187148 | CTCGG | 2 | 10 | 142251 | 142260 | 0 % | 20 % | 40 % | 40 % | 399995462 |
94 | NT_187148 | TTCCC | 2 | 10 | 143199 | 143208 | 0 % | 40 % | 0 % | 60 % | 399995462 |
95 | NT_187148 | TCCCC | 2 | 10 | 143481 | 143490 | 0 % | 20 % | 0 % | 80 % | 399995463 |
96 | NT_187148 | CGCGC | 2 | 10 | 144140 | 144149 | 0 % | 0 % | 40 % | 60 % | 399995463 |
97 | NT_187148 | GCGCC | 2 | 10 | 144446 | 144455 | 0 % | 0 % | 40 % | 60 % | 399995464 |
98 | NT_187148 | GCGTC | 2 | 10 | 145577 | 145586 | 0 % | 20 % | 40 % | 40 % | 399995466 |
99 | NT_187148 | CTGCC | 2 | 10 | 147000 | 147009 | 0 % | 20 % | 20 % | 60 % | 399995468 |
100 | NT_187148 | CCCTC | 2 | 10 | 147728 | 147737 | 0 % | 20 % | 0 % | 80 % | 399995469 |
101 | NT_187148 | GCCCC | 2 | 10 | 149509 | 149518 | 0 % | 0 % | 20 % | 80 % | 399995470 |
102 | NT_187148 | CCCCT | 2 | 10 | 150250 | 150259 | 0 % | 20 % | 0 % | 80 % | 399995472 |
103 | NT_187148 | CGTCC | 2 | 10 | 150362 | 150371 | 0 % | 20 % | 20 % | 60 % | 399995472 |
104 | NT_187148 | GAGCA | 2 | 10 | 151720 | 151729 | 40 % | 0 % | 40 % | 20 % | 399995474 |
105 | NT_187148 | TCGAA | 2 | 10 | 152198 | 152207 | 40 % | 20 % | 20 % | 20 % | 399995475 |
106 | NT_187148 | TCGAA | 2 | 10 | 153128 | 153137 | 40 % | 20 % | 20 % | 20 % | 399995476 |
107 | NT_187148 | AGGAC | 2 | 10 | 155816 | 155825 | 40 % | 0 % | 40 % | 20 % | 399995478 |
108 | NT_187148 | ACGTC | 2 | 10 | 156086 | 156095 | 20 % | 20 % | 20 % | 40 % | 399995478 |
109 | NT_187148 | CGGTA | 2 | 10 | 157780 | 157789 | 20 % | 20 % | 40 % | 20 % | 399995479 |
110 | NT_187148 | CTCCG | 2 | 10 | 159726 | 159735 | 0 % | 20 % | 20 % | 60 % | 399995482 |
111 | NT_187148 | CGCGT | 2 | 10 | 162312 | 162321 | 0 % | 20 % | 40 % | 40 % | 399995484 |
112 | NT_187148 | ACATG | 2 | 10 | 162840 | 162849 | 40 % | 20 % | 20 % | 20 % | 399995484 |
113 | NT_187148 | CGGTT | 2 | 10 | 164134 | 164143 | 0 % | 40 % | 40 % | 20 % | 399995484 |
114 | NT_187148 | CCGTC | 2 | 10 | 166363 | 166372 | 0 % | 20 % | 20 % | 60 % | 399995486 |
115 | NT_187148 | GGGCG | 2 | 10 | 166642 | 166651 | 0 % | 0 % | 80 % | 20 % | 399995486 |
116 | NT_187148 | CGGGG | 2 | 10 | 167987 | 167996 | 0 % | 0 % | 80 % | 20 % | 399995488 |
117 | NT_187148 | CGTCC | 2 | 10 | 168153 | 168162 | 0 % | 20 % | 20 % | 60 % | 399995488 |
118 | NT_187148 | ATTTC | 2 | 10 | 169266 | 169275 | 20 % | 60 % | 0 % | 20 % | 399995489 |
119 | NT_187148 | GGGTC | 2 | 10 | 169462 | 169471 | 0 % | 20 % | 60 % | 20 % | 399995489 |
120 | NT_187148 | GGCAT | 2 | 10 | 172114 | 172123 | 20 % | 20 % | 40 % | 20 % | 399995490 |
121 | NT_187148 | CGTTT | 2 | 10 | 173462 | 173471 | 0 % | 60 % | 20 % | 20 % | 399995490 |
122 | NT_187148 | TTTCC | 2 | 10 | 176621 | 176630 | 0 % | 60 % | 0 % | 40 % | 399995492 |
123 | NT_187148 | GGCAG | 2 | 10 | 177504 | 177513 | 20 % | 0 % | 60 % | 20 % | 399995492 |
124 | NT_187148 | CGGCC | 2 | 10 | 180035 | 180044 | 0 % | 0 % | 40 % | 60 % | 399995494 |
125 | NT_187148 | CGTCC | 2 | 10 | 180493 | 180502 | 0 % | 20 % | 20 % | 60 % | 399995495 |
126 | NT_187148 | GCGGA | 2 | 10 | 180703 | 180712 | 20 % | 0 % | 60 % | 20 % | 399995495 |
127 | NT_187148 | TCGCG | 2 | 10 | 181119 | 181128 | 0 % | 20 % | 40 % | 40 % | 399995496 |
128 | NT_187148 | AAGGA | 2 | 10 | 184395 | 184404 | 60 % | 0 % | 40 % | 0 % | 399995498 |
129 | NT_187148 | AGTGC | 2 | 10 | 184444 | 184453 | 20 % | 20 % | 40 % | 20 % | 399995498 |
130 | NT_187148 | GAATT | 2 | 10 | 185146 | 185155 | 40 % | 40 % | 20 % | 0 % | 399995499 |
131 | NT_187148 | TCTTT | 2 | 10 | 187772 | 187781 | 0 % | 80 % | 0 % | 20 % | 399995504 |
132 | NT_187148 | GCCGA | 2 | 10 | 188863 | 188872 | 20 % | 0 % | 40 % | 40 % | 399995505 |
133 | NT_187148 | CGATC | 2 | 10 | 188874 | 188883 | 20 % | 20 % | 20 % | 40 % | 399995505 |
134 | NT_187148 | GCCGA | 2 | 10 | 188920 | 188929 | 20 % | 0 % | 40 % | 40 % | 399995505 |
135 | NT_187148 | CAGGG | 2 | 10 | 190680 | 190689 | 20 % | 0 % | 60 % | 20 % | 399995506 |
136 | NT_187148 | TGCAG | 2 | 10 | 194541 | 194550 | 20 % | 20 % | 40 % | 20 % | 399995510 |
137 | NT_187148 | CTGGT | 2 | 10 | 200163 | 200172 | 0 % | 40 % | 40 % | 20 % | 399995515 |
138 | NT_187148 | GAATG | 2 | 10 | 200561 | 200570 | 40 % | 20 % | 40 % | 0 % | 399995516 |
139 | NT_187148 | CGATC | 2 | 10 | 202827 | 202836 | 20 % | 20 % | 20 % | 40 % | 399995518 |
140 | NT_187148 | CGGCG | 2 | 10 | 204380 | 204389 | 0 % | 0 % | 60 % | 40 % | 399995520 |
141 | NT_187148 | GTCGC | 2 | 10 | 204441 | 204450 | 0 % | 20 % | 40 % | 40 % | 399995520 |
142 | NT_187148 | GTTCG | 2 | 10 | 204739 | 204748 | 0 % | 40 % | 40 % | 20 % | 399995520 |
143 | NT_187148 | CGGCA | 2 | 10 | 204993 | 205002 | 20 % | 0 % | 40 % | 40 % | 399995520 |
144 | NT_187148 | CTTTC | 2 | 10 | 206231 | 206240 | 0 % | 60 % | 0 % | 40 % | 399995520 |
145 | NT_187148 | ACCCG | 2 | 10 | 215509 | 215518 | 20 % | 0 % | 20 % | 60 % | 399995530 |
146 | NT_187148 | GCCGC | 2 | 10 | 220252 | 220261 | 0 % | 0 % | 40 % | 60 % | 399995534 |
147 | NT_187148 | GCGCC | 2 | 10 | 221417 | 221426 | 0 % | 0 % | 40 % | 60 % | 399995534 |
148 | NT_187148 | GCAGG | 2 | 10 | 224260 | 224269 | 20 % | 0 % | 60 % | 20 % | 399995536 |
149 | NT_187148 | GGAAG | 2 | 10 | 226988 | 226997 | 40 % | 0 % | 60 % | 0 % | 399995541 |
150 | NT_187148 | ATGGG | 2 | 10 | 227447 | 227456 | 20 % | 20 % | 60 % | 0 % | 399995541 |
151 | NT_187148 | TGAGC | 2 | 10 | 227666 | 227675 | 20 % | 20 % | 40 % | 20 % | 399995541 |
152 | NT_187148 | ATCCG | 2 | 10 | 231177 | 231186 | 20 % | 20 % | 20 % | 40 % | 399995545 |
153 | NT_187148 | TGTCG | 2 | 10 | 232801 | 232810 | 0 % | 40 % | 40 % | 20 % | 399995548 |
154 | NT_187148 | TTTGG | 2 | 10 | 233190 | 233199 | 0 % | 60 % | 40 % | 0 % | 399995549 |
155 | NT_187148 | ATGCA | 2 | 10 | 235010 | 235019 | 40 % | 20 % | 20 % | 20 % | 399995551 |
156 | NT_187148 | ATGAA | 2 | 10 | 236325 | 236334 | 60 % | 20 % | 20 % | 0 % | 399995552 |
157 | NT_187148 | CTTCG | 2 | 10 | 236586 | 236595 | 0 % | 40 % | 20 % | 40 % | 399995553 |
158 | NT_187148 | ACGGC | 2 | 10 | 236809 | 236818 | 20 % | 0 % | 40 % | 40 % | 399995553 |
159 | NT_187148 | TCGGC | 2 | 10 | 237969 | 237978 | 0 % | 20 % | 40 % | 40 % | 399995554 |
160 | NT_187148 | TGATC | 2 | 10 | 242469 | 242478 | 20 % | 40 % | 20 % | 20 % | 399995559 |
161 | NT_187148 | CGAAC | 2 | 10 | 243045 | 243054 | 40 % | 0 % | 20 % | 40 % | 399995560 |
162 | NT_187148 | CCGAC | 2 | 10 | 246998 | 247007 | 20 % | 0 % | 20 % | 60 % | 399995565 |