MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia hermsii DAH clone fragment 1025rc

Total Repeats: 70

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NT_187136	AAG	2	6	149	154	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NT_187136	ATA	3	9	257	265	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NT_187136	GCA	2	6	302	307	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NT_187136	ATG	2	6	361	366	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NT_187136	TAG	2	6	381	386	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NT_187136	CAC	2	6	497	502	33.33 %	0 %	0 %	66.67 %	Non-Coding
7	NT_187136	CAT	2	6	568	573	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NT_187136	AAG	2	6	1346	1351	66.67 %	0 %	33.33 %	0 %	Non-Coding
9	NT_187136	TTA	2	6	1352	1357	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NT_187136	AAT	3	9	1644	1652	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NT_187136	CAG	2	6	1688	1693	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NT_187136	AAG	2	6	1791	1796	66.67 %	0 %	33.33 %	0 %	Non-Coding
13	NT_187136	ATA	2	6	1893	1898	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NT_187136	ATT	2	6	2006	2011	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NT_187136	CTG	2	6	2125	2130	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NT_187136	GGT	2	6	2139	2144	0 %	33.33 %	66.67 %	0 %	Non-Coding
17	NT_187136	GTT	2	6	2179	2184	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NT_187136	GTT	2	6	2189	2194	0 %	66.67 %	33.33 %	0 %	Non-Coding
19	NT_187136	GAA	2	6	2198	2203	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NT_187136	ATT	2	6	2216	2221	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NT_187136	ATC	2	6	2258	2263	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NT_187136	CTT	2	6	2378	2383	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NT_187136	ATT	2	6	2386	2391	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NT_187136	TAA	2	6	3561	3566	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NT_187136	ATT	2	6	3585	3590	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NT_187136	GAA	2	6	3591	3596	66.67 %	0 %	33.33 %	0 %	Non-Coding
27	NT_187136	AAG	2	6	3662	3667	66.67 %	0 %	33.33 %	0 %	Non-Coding
28	NT_187136	ATA	2	6	3674	3679	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NT_187136	AAT	3	9	3698	3706	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NT_187136	TAA	2	6	3734	3739	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NT_187136	GCA	2	6	3840	3845	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NT_187136	TGA	2	6	3881	3886	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
33	NT_187136	ATG	2	6	3919	3924	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NT_187136	GGT	2	6	3971	3976	0 %	33.33 %	66.67 %	0 %	Non-Coding
35	NT_187136	AAG	2	6	4089	4094	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NT_187136	TGT	2	6	4109	4114	0 %	66.67 %	33.33 %	0 %	Non-Coding
37	NT_187136	CTA	2	6	4135	4140	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NT_187136	GAT	2	6	4143	4148	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NT_187136	GAA	2	6	4203	4208	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NT_187136	CAG	2	6	4225	4230	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NT_187136	AGT	2	6	4348	4353	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NT_187136	TAT	2	6	4354	4359	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NT_187136	GCA	2	6	4598	4603	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NT_187136	ATA	2	6	4760	4765	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NT_187136	GTA	2	6	4769	4774	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46	NT_187136	ATA	2	6	4787	4792	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NT_187136	AAT	2	6	4850	4855	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NT_187136	GCT	2	6	4856	4861	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NT_187136	TGC	2	6	4922	4927	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
50	NT_187136	AAG	2	6	4990	4995	66.67 %	0 %	33.33 %	0 %	Non-Coding
51	NT_187136	CTG	3	9	5047	5055	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
52	NT_187136	TGC	2	6	5081	5086	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NT_187136	TGC	3	9	5099	5107	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
54	NT_187136	GCA	2	6	5121	5126	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NT_187136	TGT	2	6	5202	5207	0 %	66.67 %	33.33 %	0 %	Non-Coding
56	NT_187136	AAC	2	6	5223	5228	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NT_187136	AGG	2	6	5266	5271	33.33 %	0 %	66.67 %	0 %	Non-Coding
58	NT_187136	CTG	2	6	5319	5324	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
59	NT_187136	TAC	2	6	5332	5337	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NT_187136	TTA	2	6	5369	5374	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NT_187136	TAA	2	6	5400	5405	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NT_187136	TAA	2	6	5510	5515	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NT_187136	AAT	3	9	5631	5639	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NT_187136	AGT	2	6	5753	5758	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
65	NT_187136	TGC	2	6	5824	5829	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
66	NT_187136	TAA	2	6	5830	5835	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NT_187136	ATG	2	6	5873	5878	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NT_187136	TAT	2	6	7828	7833	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NT_187136	TAA	2	6	8875	8880	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NT_187136	TTA	2	6	8901	8906	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.