MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Carnobacterium sp. WN1359 plasmid pWNCR47

Total Repeats: 126

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022602	GAA	2	6	94	99	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_022602	AGC	2	6	101	106	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3	NC_022602	TTG	2	6	125	130	0 %	66.67 %	33.33 %	0 %	Non-Coding
4	NC_022602	TGT	2	6	213	218	0 %	66.67 %	33.33 %	0 %	Non-Coding
5	NC_022602	AAG	2	6	358	363	66.67 %	0 %	33.33 %	0 %	Non-Coding
6	NC_022602	CTA	2	6	389	394	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_022602	AGA	2	6	414	419	66.67 %	0 %	33.33 %	0 %	Non-Coding
8	NC_022602	TAG	2	6	458	463	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_022602	TAT	2	6	514	519	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_022602	AGA	2	6	606	611	66.67 %	0 %	33.33 %	0 %	Non-Coding
11	NC_022602	ACT	2	6	621	626	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_022602	CAA	2	6	640	645	66.67 %	0 %	0 %	33.33 %	Non-Coding
13	NC_022602	GTT	2	6	670	675	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_022602	GAA	2	6	706	711	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_022602	AGT	2	6	735	740	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_022602	TAT	2	6	880	885	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_022602	GAT	2	6	886	891	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18	NC_022602	CTT	2	6	911	916	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_022602	ATT	2	6	971	976	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_022602	AGA	2	6	1044	1049	66.67 %	0 %	33.33 %	0 %	Non-Coding
21	NC_022602	CAA	2	6	1101	1106	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_022602	GCT	2	6	1120	1125	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23	NC_022602	TCT	2	6	1126	1131	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_022602	TAA	2	6	1163	1168	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_022602	CAA	2	6	1282	1287	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_022602	TTG	2	6	1309	1314	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_022602	ATT	2	6	1316	1321	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_022602	GAA	2	6	1369	1374	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_022602	TTC	2	6	1428	1433	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_022602	GTA	2	6	1516	1521	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_022602	AGA	2	6	2248	2253	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_022602	TTA	2	6	2277	2282	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_022602	AAT	2	6	2298	2303	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_022602	GGA	2	6	2343	2348	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_022602	AAG	2	6	2978	2983	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NC_022602	AAG	2	6	3329	3334	66.67 %	0 %	33.33 %	0 %	Non-Coding
37	NC_022602	AGG	2	6	6356	6361	33.33 %	0 %	66.67 %	0 %	Non-Coding
38	NC_022602	GGA	2	6	9391	9396	33.33 %	0 %	66.67 %	0 %	Non-Coding
39	NC_022602	TGA	2	6	11387	11392	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40	NC_022602	AAT	2	6	12780	12785	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_022602	AAT	2	6	12884	12889	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_022602	CAT	2	6	12929	12934	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_022602	ATT	2	6	15404	15409	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_022602	CTA	2	6	15429	15434	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_022602	ATT	2	6	15642	15647	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_022602	TCC	2	6	16569	16574	0 %	33.33 %	0 %	66.67 %	Non-Coding
47	NC_022602	TAT	2	6	16606	16611	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_022602	GAT	2	6	20410	20415	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
49	NC_022602	CAG	2	6	20499	20504	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_022602	CTT	2	6	20525	20530	0 %	66.67 %	0 %	33.33 %	Non-Coding
51	NC_022602	ATA	2	6	20560	20565	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_022602	ATA	2	6	20612	20617	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_022602	GAA	2	6	20624	20629	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_022602	ATA	2	6	20641	20646	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_022602	ATG	2	6	20657	20662	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_022602	ATT	2	6	20668	20673	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_022602	TAT	2	6	20728	20733	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_022602	TAA	2	6	21308	21313	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_022602	CCT	2	6	22583	22588	0 %	33.33 %	0 %	66.67 %	Non-Coding
60	NC_022602	ATT	2	6	22769	22774	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_022602	TCT	2	6	22786	22791	0 %	66.67 %	0 %	33.33 %	Non-Coding
62	NC_022602	TTG	2	6	22843	22848	0 %	66.67 %	33.33 %	0 %	Non-Coding
63	NC_022602	TAA	2	6	24112	24117	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_022602	TCT	2	6	24808	24813	0 %	66.67 %	0 %	33.33 %	Non-Coding
65	NC_022602	ATT	2	6	24814	24819	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_022602	AAT	2	6	24830	24835	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_022602	AAT	2	6	26437	26442	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_022602	ATT	2	6	26486	26491	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_022602	TAA	2	6	26512	26517	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_022602	ATT	2	6	26561	26566	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_022602	TAA	2	6	26640	26645	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_022602	AAT	2	6	26737	26742	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_022602	ATA	3	9	26782	26790	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_022602	ATA	2	6	31819	31824	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_022602	GAA	2	6	31949	31954	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_022602	CCT	2	6	32704	32709	0 %	33.33 %	0 %	66.67 %	Non-Coding
77	NC_022602	CCT	2	6	34147	34152	0 %	33.33 %	0 %	66.67 %	Non-Coding
78	NC_022602	ATA	2	6	34200	34205	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_022602	TAC	2	6	34216	34221	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_022602	TGT	2	6	34577	34582	0 %	66.67 %	33.33 %	0 %	Non-Coding
81	NC_022602	ACA	2	6	34691	34696	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_022602	ATT	2	6	34698	34703	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_022602	CGC	2	6	34819	34824	0 %	0 %	33.33 %	66.67 %	Non-Coding
84	NC_022602	TGG	2	6	34907	34912	0 %	33.33 %	66.67 %	0 %	Non-Coding
85	NC_022602	ACA	3	9	34998	35006	66.67 %	0 %	0 %	33.33 %	Non-Coding
86	NC_022602	CGA	2	6	35008	35013	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
87	NC_022602	CAC	2	6	35135	35140	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_022602	AAT	2	6	35255	35260	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_022602	TAA	2	6	35355	35360	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_022602	ACT	2	6	35380	35385	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_022602	AGG	2	6	35396	35401	33.33 %	0 %	66.67 %	0 %	Non-Coding
92	NC_022602	AGA	2	6	36109	36114	66.67 %	0 %	33.33 %	0 %	Non-Coding
93	NC_022602	GGA	2	6	36117	36122	33.33 %	0 %	66.67 %	0 %	Non-Coding
94	NC_022602	TGA	2	6	36950	36955	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
95	NC_022602	CAT	2	6	37049	37054	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
96	NC_022602	TAT	2	6	37085	37090	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_022602	TTA	2	6	39752	39757	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_022602	TTG	2	6	39774	39779	0 %	66.67 %	33.33 %	0 %	Non-Coding
99	NC_022602	AAT	2	6	39800	39805	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_022602	TTA	2	6	39817	39822	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_022602	AAC	2	6	39902	39907	66.67 %	0 %	0 %	33.33 %	Non-Coding
102	NC_022602	TCG	2	6	39914	39919	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
103	NC_022602	TTA	2	6	40684	40689	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_022602	TAA	2	6	40734	40739	66.67 %	33.33 %	0 %	0 %	Non-Coding
105	NC_022602	ATA	2	6	41212	41217	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_022602	CTT	2	6	41765	41770	0 %	66.67 %	0 %	33.33 %	Non-Coding
107	NC_022602	GAT	2	6	41818	41823	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
108	NC_022602	AGG	2	6	41849	41854	33.33 %	0 %	66.67 %	0 %	Non-Coding
109	NC_022602	GTT	2	6	43080	43085	0 %	66.67 %	33.33 %	0 %	Non-Coding
110	NC_022602	ATA	2	6	43778	43783	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_022602	ATT	2	6	43813	43818	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_022602	ATA	2	6	45614	45619	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_022602	TAC	2	6	45694	45699	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
114	NC_022602	TCT	2	6	45709	45714	0 %	66.67 %	0 %	33.33 %	Non-Coding
115	NC_022602	AGA	3	9	46283	46291	66.67 %	0 %	33.33 %	0 %	Non-Coding
116	NC_022602	TAC	2	6	46362	46367	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
117	NC_022602	AAT	2	6	46373	46378	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_022602	TAA	2	6	46389	46394	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_022602	ATT	2	6	46407	46412	33.33 %	66.67 %	0 %	0 %	Non-Coding
120	NC_022602	GAT	2	6	46489	46494	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
121	NC_022602	ATT	2	6	46525	46530	33.33 %	66.67 %	0 %	0 %	Non-Coding
122	NC_022602	TTA	2	6	46651	46656	33.33 %	66.67 %	0 %	0 %	Non-Coding
123	NC_022602	TTG	2	6	46832	46837	0 %	66.67 %	33.33 %	0 %	Non-Coding
124	NC_022602	TGG	2	6	46847	46852	0 %	33.33 %	66.67 %	0 %	Non-Coding
125	NC_022602	ATG	2	6	46970	46975	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
126	NC_022602	AAG	2	6	46976	46981	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.