Penta-nucleotide Coding Repeats of Sulfuricella denitrificans skB26 plasmid pSCD DNA
Total Repeats: 48
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_022358 | ATTTA | 2 | 10 | 644 | 653 | 40 % | 60 % | 0 % | 0 % | 543966429 |
2 | NC_022358 | AGGTG | 2 | 10 | 6327 | 6336 | 20 % | 20 % | 60 % | 0 % | 543966434 |
3 | NC_022358 | TTGGA | 2 | 10 | 7805 | 7814 | 20 % | 40 % | 40 % | 0 % | 543966436 |
4 | NC_022358 | CTTTT | 2 | 10 | 10476 | 10485 | 0 % | 80 % | 0 % | 20 % | 543966438 |
5 | NC_022358 | CCACT | 2 | 10 | 11220 | 11229 | 20 % | 20 % | 0 % | 60 % | 543966440 |
6 | NC_022358 | TTTTC | 2 | 10 | 12359 | 12368 | 0 % | 80 % | 0 % | 20 % | 543966442 |
7 | NC_022358 | CTGCA | 2 | 10 | 17488 | 17497 | 20 % | 20 % | 20 % | 40 % | 543966446 |
8 | NC_022358 | ATTCA | 2 | 10 | 17954 | 17963 | 40 % | 40 % | 0 % | 20 % | 543966446 |
9 | NC_022358 | CTGGA | 2 | 10 | 21513 | 21522 | 20 % | 20 % | 40 % | 20 % | 543966449 |
10 | NC_022358 | ATTGA | 2 | 10 | 27075 | 27084 | 40 % | 40 % | 20 % | 0 % | 543966455 |
11 | NC_022358 | AACCA | 2 | 10 | 27949 | 27958 | 60 % | 0 % | 0 % | 40 % | 543966458 |
12 | NC_022358 | TTTCA | 2 | 10 | 28363 | 28372 | 20 % | 60 % | 0 % | 20 % | 543966458 |
13 | NC_022358 | GCGCC | 2 | 10 | 30640 | 30649 | 0 % | 0 % | 40 % | 60 % | 543966461 |
14 | NC_022358 | GCCTG | 2 | 10 | 34504 | 34513 | 0 % | 20 % | 40 % | 40 % | 543966466 |
15 | NC_022358 | CACTC | 2 | 10 | 34553 | 34562 | 20 % | 20 % | 0 % | 60 % | 543966467 |
16 | NC_022358 | CCATT | 2 | 10 | 37203 | 37212 | 20 % | 40 % | 0 % | 40 % | 543966469 |
17 | NC_022358 | GCAAA | 2 | 10 | 38242 | 38251 | 60 % | 0 % | 20 % | 20 % | 543966470 |
18 | NC_022358 | CGGTA | 2 | 10 | 39207 | 39216 | 20 % | 20 % | 40 % | 20 % | 543966470 |
19 | NC_022358 | GCACC | 2 | 10 | 39428 | 39437 | 20 % | 0 % | 20 % | 60 % | 543966471 |
20 | NC_022358 | TGGCG | 2 | 10 | 42424 | 42433 | 0 % | 20 % | 60 % | 20 % | 543966474 |
21 | NC_022358 | TGCGG | 2 | 10 | 46148 | 46157 | 0 % | 20 % | 60 % | 20 % | 543966476 |
22 | NC_022358 | ACACC | 2 | 10 | 46381 | 46390 | 40 % | 0 % | 0 % | 60 % | 543966476 |
23 | NC_022358 | CCGCG | 2 | 10 | 46457 | 46466 | 0 % | 0 % | 40 % | 60 % | 543966476 |
24 | NC_022358 | TCCGT | 2 | 10 | 49786 | 49795 | 0 % | 40 % | 20 % | 40 % | 543966479 |
25 | NC_022358 | GCCCG | 2 | 10 | 50004 | 50013 | 0 % | 0 % | 40 % | 60 % | 543966479 |
26 | NC_022358 | TGGCG | 2 | 10 | 50033 | 50042 | 0 % | 20 % | 60 % | 20 % | 543966479 |
27 | NC_022358 | GCCAG | 2 | 10 | 50827 | 50836 | 20 % | 0 % | 40 % | 40 % | 543966480 |
28 | NC_022358 | CCAGA | 2 | 10 | 53111 | 53120 | 40 % | 0 % | 20 % | 40 % | 543966484 |
29 | NC_022358 | GCCCG | 2 | 10 | 55491 | 55500 | 0 % | 0 % | 40 % | 60 % | 543966488 |
30 | NC_022358 | GGCCG | 2 | 10 | 59146 | 59155 | 0 % | 0 % | 60 % | 40 % | 543966490 |
31 | NC_022358 | CCCTG | 2 | 10 | 59357 | 59366 | 0 % | 20 % | 20 % | 60 % | 543966490 |
32 | NC_022358 | TTGCT | 2 | 10 | 59644 | 59653 | 0 % | 60 % | 20 % | 20 % | 543966490 |
33 | NC_022358 | TTTCA | 2 | 10 | 62739 | 62748 | 20 % | 60 % | 0 % | 20 % | 543966494 |
34 | NC_022358 | CCCCG | 2 | 10 | 63494 | 63503 | 0 % | 0 % | 20 % | 80 % | 543966497 |
35 | NC_022358 | TCACT | 2 | 10 | 64071 | 64080 | 20 % | 40 % | 0 % | 40 % | 543966497 |
36 | NC_022358 | GCGCC | 2 | 10 | 64742 | 64751 | 0 % | 0 % | 40 % | 60 % | 543966499 |
37 | NC_022358 | CGCCC | 2 | 10 | 65466 | 65475 | 0 % | 0 % | 20 % | 80 % | 543966499 |
38 | NC_022358 | GCGCC | 2 | 10 | 65946 | 65955 | 0 % | 0 % | 40 % | 60 % | 543966501 |
39 | NC_022358 | GCCAG | 2 | 10 | 66579 | 66588 | 20 % | 0 % | 40 % | 40 % | 543966501 |
40 | NC_022358 | GCCAG | 2 | 10 | 67512 | 67521 | 20 % | 0 % | 40 % | 40 % | 543966503 |
41 | NC_022358 | TCCAC | 2 | 10 | 67788 | 67797 | 20 % | 20 % | 0 % | 60 % | 543966503 |
42 | NC_022358 | CTCCA | 2 | 10 | 67880 | 67889 | 20 % | 20 % | 0 % | 60 % | 543966503 |
43 | NC_022358 | TGACC | 2 | 10 | 70612 | 70621 | 20 % | 20 % | 20 % | 40 % | 543966506 |
44 | NC_022358 | TCGGC | 2 | 10 | 71805 | 71814 | 0 % | 20 % | 40 % | 40 % | 543966506 |
45 | NC_022358 | GCCGA | 2 | 10 | 74616 | 74625 | 20 % | 0 % | 40 % | 40 % | 543966509 |
46 | NC_022358 | GGCAA | 2 | 10 | 80061 | 80070 | 40 % | 0 % | 40 % | 20 % | 543966512 |
47 | NC_022358 | TGCCC | 2 | 10 | 82316 | 82325 | 0 % | 20 % | 20 % | 60 % | 543966514 |
48 | NC_022358 | GCAAG | 2 | 10 | 83185 | 83194 | 40 % | 0 % | 40 % | 20 % | 543966515 |