MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus aureus subsp. aureus 55/2053 plasmid

Total Repeats: 85

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022126	TAA	2	6	87	92	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_022126	TAT	2	6	135	140	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_022126	TTA	2	6	197	202	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_022126	ATC	2	6	1230	1235	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_022126	TGA	2	6	1248	1253	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_022126	CGA	2	6	1254	1259	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_022126	TGG	2	6	1322	1327	0 %	33.33 %	66.67 %	0 %	Non-Coding
8	NC_022126	TGA	2	6	1397	1402	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_022126	GAA	3	9	1419	1427	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_022126	ATT	3	9	1471	1479	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_022126	TGA	2	6	1672	1677	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_022126	TTG	2	6	1797	1802	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_022126	TCT	2	6	2448	2453	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_022126	GAC	2	6	2492	2497	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_022126	TAA	2	6	2537	2542	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_022126	TCA	2	6	2632	2637	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_022126	TTG	2	6	2647	2652	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_022126	TAG	2	6	2794	2799	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_022126	ATT	2	6	2846	2851	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_022126	TCT	2	6	2922	2927	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_022126	TTA	2	6	4293	4298	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_022126	CAT	2	6	4389	4394	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_022126	TCC	2	6	5092	5097	0 %	33.33 %	0 %	66.67 %	Non-Coding
24	NC_022126	CCT	2	6	5129	5134	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_022126	CAA	2	6	5175	5180	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_022126	TGT	2	6	5399	5404	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_022126	TGT	2	6	5484	5489	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_022126	ATT	2	6	5582	5587	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_022126	CTG	2	6	5728	5733	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_022126	TTC	2	6	5764	5769	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_022126	AAT	2	6	6097	6102	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_022126	TCG	2	6	6207	6212	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_022126	TTC	2	6	6251	6256	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_022126	TAT	2	6	6268	6273	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_022126	GCA	2	6	6334	6339	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_022126	CGC	2	6	6518	6523	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_022126	CCG	2	6	6525	6530	0 %	0 %	33.33 %	66.67 %	Non-Coding
38	NC_022126	AAT	2	6	6536	6541	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_022126	AGA	2	6	6543	6548	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_022126	TTC	2	6	6599	6604	0 %	66.67 %	0 %	33.33 %	Non-Coding
41	NC_022126	ATC	2	6	6659	6664	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_022126	TTC	2	6	6749	6754	0 %	66.67 %	0 %	33.33 %	Non-Coding
43	NC_022126	ATT	2	6	8984	8989	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_022126	AAT	2	6	9003	9008	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_022126	AAG	2	6	9103	9108	66.67 %	0 %	33.33 %	0 %	Non-Coding
46	NC_022126	TTC	2	6	9114	9119	0 %	66.67 %	0 %	33.33 %	Non-Coding
47	NC_022126	TCT	2	6	10017	10022	0 %	66.67 %	0 %	33.33 %	Non-Coding
48	NC_022126	GCT	2	6	10804	10809	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_022126	TTC	2	6	10870	10875	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_022126	ATC	2	6	13482	13487	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_022126	TAT	2	6	13517	13522	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_022126	TCA	2	6	13536	13541	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53	NC_022126	AAT	2	6	13662	13667	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_022126	AGG	2	6	13834	13839	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_022126	GTT	2	6	14492	14497	0 %	66.67 %	33.33 %	0 %	Non-Coding
56	NC_022126	AAC	2	6	14506	14511	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_022126	TAT	2	6	15228	15233	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_022126	TAA	3	9	15241	15249	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_022126	TTA	2	6	15328	15333	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_022126	CCT	2	6	17380	17385	0 %	33.33 %	0 %	66.67 %	Non-Coding
61	NC_022126	ATT	2	6	17415	17420	33.33 %	66.67 %	0 %	0 %	Non-Coding
62	NC_022126	TAA	2	6	17812	17817	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_022126	TAA	2	6	17831	17836	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_022126	GAA	2	6	17938	17943	66.67 %	0 %	33.33 %	0 %	Non-Coding
65	NC_022126	TAA	2	6	18117	18122	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_022126	ATA	2	6	18246	18251	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_022126	GTG	3	9	18324	18332	0 %	33.33 %	66.67 %	0 %	Non-Coding
68	NC_022126	TGA	2	6	18391	18396	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_022126	TAT	2	6	18444	18449	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_022126	TGA	2	6	18460	18465	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_022126	AAT	2	6	18667	18672	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_022126	TTA	2	6	18679	18684	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_022126	AGT	2	6	18685	18690	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_022126	TAG	2	6	18693	18698	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_022126	AAC	2	6	18973	18978	66.67 %	0 %	0 %	33.33 %	Non-Coding
76	NC_022126	TGG	2	6	19015	19020	0 %	33.33 %	66.67 %	0 %	Non-Coding
77	NC_022126	CTT	2	6	19311	19316	0 %	66.67 %	0 %	33.33 %	Non-Coding
78	NC_022126	ATA	2	6	19367	19372	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_022126	CTC	2	6	19373	19378	0 %	33.33 %	0 %	66.67 %	Non-Coding
80	NC_022126	TTA	2	6	19382	19387	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_022126	GAT	2	6	19400	19405	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
82	NC_022126	ACC	2	6	20283	20288	33.33 %	0 %	0 %	66.67 %	Non-Coding
83	NC_022126	TAC	2	6	20324	20329	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_022126	ACT	2	6	20337	20342	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_022126	GTG	2	6	20397	20402	0 %	33.33 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.