MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis strain F/6-94

Total Repeats: 34

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022118	GAAGGA	2	12	760	771	50 %	0 %	50 %	0 %	Non-Coding
2	NC_022118	CAAAAA	2	12	6250	6261	83.33 %	0 %	0 %	16.67 %	Non-Coding
3	NC_022118	AAAATT	2	12	54080	54091	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_022118	AAAAAT	2	12	60889	60900	83.33 %	16.67 %	0 %	0 %	Non-Coding
5	NC_022118	ATCTAG	2	12	76611	76622	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
6	NC_022118	TTTTAG	2	12	115880	115891	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
7	NC_022118	TAAAAA	2	12	120476	120487	83.33 %	16.67 %	0 %	0 %	Non-Coding
8	NC_022118	AGAAAA	2	12	182079	182090	83.33 %	0 %	16.67 %	0 %	Non-Coding
9	NC_022118	TTTTAC	2	12	220853	220864	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
10	NC_022118	AACCCT	2	12	254566	254577	33.33 %	16.67 %	0 %	50 %	Non-Coding
11	NC_022118	ATATTA	2	12	279368	279379	50 %	50 %	0 %	0 %	Non-Coding
12	NC_022118	AAAAAG	2	12	323537	323548	83.33 %	0 %	16.67 %	0 %	Non-Coding
13	NC_022118	AGAATA	2	12	361040	361051	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
14	NC_022118	TTCTTA	2	12	361060	361071	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
15	NC_022118	TAACTA	2	12	502749	502760	50 %	33.33 %	0 %	16.67 %	Non-Coding
16	NC_022118	AAGAAA	2	12	502762	502773	83.33 %	0 %	16.67 %	0 %	Non-Coding
17	NC_022118	AGAATA	2	12	508737	508748	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_022118	AACTAA	2	12	514474	514485	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
19	NC_022118	TCTCTA	2	12	516561	516572	16.67 %	50 %	0 %	33.33 %	Non-Coding
20	NC_022118	AAAAAT	2	12	566488	566499	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_022118	TAGGGG	2	12	605638	605649	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
22	NC_022118	TCTTTT	2	12	617623	617634	0 %	83.33 %	0 %	16.67 %	Non-Coding
23	NC_022118	TTATTT	2	12	648835	648846	16.67 %	83.33 %	0 %	0 %	Non-Coding
24	NC_022118	TATTTT	2	12	754778	754789	16.67 %	83.33 %	0 %	0 %	Non-Coding
25	NC_022118	TTTTCT	2	12	804679	804690	0 %	83.33 %	0 %	16.67 %	Non-Coding
26	NC_022118	ATTTTT	2	12	808456	808467	16.67 %	83.33 %	0 %	0 %	Non-Coding
27	NC_022118	ATTTTT	2	12	834935	834946	16.67 %	83.33 %	0 %	0 %	Non-Coding
28	NC_022118	TAAGGA	2	12	855899	855910	50 %	16.67 %	33.33 %	0 %	Non-Coding
29	NC_022118	CCGGAG	2	12	856817	856828	16.67 %	0 %	50 %	33.33 %	Non-Coding
30	NC_022118	TAAGGA	2	12	877949	877960	50 %	16.67 %	33.33 %	0 %	Non-Coding
31	NC_022118	CCGGAG	2	12	878867	878878	16.67 %	0 %	50 %	33.33 %	Non-Coding
32	NC_022118	GACGGC	2	12	921291	921302	16.67 %	0 %	50 %	33.33 %	Non-Coding
33	NC_022118	AAACAA	2	12	922979	922990	83.33 %	0 %	0 %	16.67 %	Non-Coding
34	NC_022118	TAAAAT	2	12	1042088	1042099	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.