MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis F/11-96

Total Repeats: 38

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022107	GAAGGA	2	12	760	771	50 %	0 %	50 %	0 %	Non-Coding
2	NC_022107	CAAAAA	2	12	6250	6261	83.33 %	0 %	0 %	16.67 %	Non-Coding
3	NC_022107	AAAATT	2	12	54190	54201	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_022107	AAAAAT	2	12	61000	61011	83.33 %	16.67 %	0 %	0 %	Non-Coding
5	NC_022107	ATCTAG	2	12	76723	76734	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
6	NC_022107	TTTTAG	2	12	115996	116007	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
7	NC_022107	TAAAAA	2	12	120592	120603	83.33 %	16.67 %	0 %	0 %	Non-Coding
8	NC_022107	AGAAAA	2	12	182207	182218	83.33 %	0 %	16.67 %	0 %	Non-Coding
9	NC_022107	TATGAA	2	12	194980	194991	50 %	33.33 %	16.67 %	0 %	Non-Coding
10	NC_022107	TTTTAC	2	12	220957	220968	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
11	NC_022107	AACCCT	2	12	254672	254683	33.33 %	16.67 %	0 %	50 %	Non-Coding
12	NC_022107	ATTTTT	2	12	255476	255487	16.67 %	83.33 %	0 %	0 %	Non-Coding
13	NC_022107	AGGAGA	2	12	270575	270586	50 %	0 %	50 %	0 %	Non-Coding
14	NC_022107	ATCTAA	2	12	272680	272691	50 %	33.33 %	0 %	16.67 %	Non-Coding
15	NC_022107	ATATTA	2	12	279473	279484	50 %	50 %	0 %	0 %	Non-Coding
16	NC_022107	AAAAAG	2	12	323642	323653	83.33 %	0 %	16.67 %	0 %	Non-Coding
17	NC_022107	AGAATA	2	12	361146	361157	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_022107	TAACTA	2	12	502861	502872	50 %	33.33 %	0 %	16.67 %	Non-Coding
19	NC_022107	AAGAAA	2	12	502874	502885	83.33 %	0 %	16.67 %	0 %	Non-Coding
20	NC_022107	AGAATA	2	12	508849	508860	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
21	NC_022107	AACTAA	2	12	514586	514597	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
22	NC_022107	TCCCTC	2	12	548629	548640	0 %	33.33 %	0 %	66.67 %	Non-Coding
23	NC_022107	AAAAAT	2	12	566601	566612	83.33 %	16.67 %	0 %	0 %	Non-Coding
24	NC_022107	TAGGGG	2	12	605754	605765	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
25	NC_022107	TTATTT	2	12	648952	648963	16.67 %	83.33 %	0 %	0 %	Non-Coding
26	NC_022107	TATTTT	2	12	754898	754909	16.67 %	83.33 %	0 %	0 %	Non-Coding
27	NC_022107	TTTTCT	2	12	804797	804808	0 %	83.33 %	0 %	16.67 %	Non-Coding
28	NC_022107	ATTTTT	2	12	808576	808587	16.67 %	83.33 %	0 %	0 %	Non-Coding
29	NC_022107	ATTTTT	2	12	835055	835066	16.67 %	83.33 %	0 %	0 %	Non-Coding
30	NC_022107	TAAGGA	2	12	856019	856030	50 %	16.67 %	33.33 %	0 %	Non-Coding
31	NC_022107	CCGGAG	2	12	856937	856948	16.67 %	0 %	50 %	33.33 %	Non-Coding
32	NC_022107	CCTCTA	2	12	870088	870099	16.67 %	33.33 %	0 %	50 %	Non-Coding
33	NC_022107	TAAGGA	2	12	878070	878081	50 %	16.67 %	33.33 %	0 %	Non-Coding
34	NC_022107	CCGGAG	2	12	878988	878999	16.67 %	0 %	50 %	33.33 %	Non-Coding
35	NC_022107	GACGGC	2	12	921412	921423	16.67 %	0 %	50 %	33.33 %	Non-Coding
36	NC_022107	AAACAA	2	12	923100	923111	83.33 %	0 %	0 %	16.67 %	Non-Coding
37	NC_022107	CGTTGA	2	12	1023918	1023929	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
38	NC_022107	TAAAAT	2	12	1042210	1042221	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.