MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Repeats of Listeria monocytogenes strain J1926 plasmid

Total Repeats: 20

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022051	TGAAGC	2	12	29	40	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
2	NC_022051	CTACTT	2	12	672	683	16.67 %	50 %	0 %	33.33 %	530341461
3	NC_022051	ATTTTC	2	12	9058	9069	16.67 %	66.67 %	0 %	16.67 %	530341470
4	NC_022051	CTCTAA	2	12	9858	9869	33.33 %	33.33 %	0 %	33.33 %	530341471
5	NC_022051	TAGAGG	2	12	10027	10038	33.33 %	16.67 %	50 %	0 %	530341471
6	NC_022051	AAATAT	2	12	10722	10733	66.67 %	33.33 %	0 %	0 %	530341472
7	NC_022051	TTAAAT	2	12	12749	12760	50 %	50 %	0 %	0 %	530341473
8	NC_022051	ATCGAG	2	12	17672	17683	33.33 %	16.67 %	33.33 %	16.67 %	530341477
9	NC_022051	AATAAA	2	12	20127	20138	83.33 %	16.67 %	0 %	0 %	530341479
10	NC_022051	TTTCCT	2	12	21199	21210	0 %	66.67 %	0 %	33.33 %	530341481
11	NC_022051	GTCGAT	2	12	21685	21696	16.67 %	33.33 %	33.33 %	16.67 %	530341481
12	NC_022051	ATTTCA	2	12	21993	22004	33.33 %	50 %	0 %	16.67 %	530341481
13	NC_022051	ACAAAA	2	12	27197	27208	83.33 %	0 %	0 %	16.67 %	530341486
14	NC_022051	AAAGAA	2	12	30739	30750	83.33 %	0 %	16.67 %	0 %	530341491
15	NC_022051	TGTCAG	2	12	41694	41705	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
16	NC_022051	TACATT	2	12	43103	43114	33.33 %	50 %	0 %	16.67 %	Non-Coding
17	NC_022051	ATTAAC	2	12	47850	47861	50 %	33.33 %	0 %	16.67 %	530341512
18	NC_022051	AATATA	2	12	47922	47933	66.67 %	33.33 %	0 %	0 %	530341512
19	NC_022051	AGATAA	2	12	51285	51296	66.67 %	16.67 %	16.67 %	0 %	530341514
20	NC_022051	CGCCTG	2	12	54878	54889	0 %	16.67 %	33.33 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.