MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Coding Repeats of Listeria monocytogenes strain J1817 plasmid

Total Repeats: 17

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022047	CGCCTG	2	12	3806	3817	0 %	16.67 %	33.33 %	50 %	530314111
2	NC_022047	TGAAGC	2	12	4760	4771	33.33 %	16.67 %	33.33 %	16.67 %	530314111
3	NC_022047	CTACTT	2	12	5403	5414	16.67 %	50 %	0 %	33.33 %	530314128
4	NC_022047	ATTTTC	2	12	13789	13800	16.67 %	66.67 %	0 %	16.67 %	530314137
5	NC_022047	CTCTAA	2	12	14589	14600	33.33 %	33.33 %	0 %	33.33 %	530314138
6	NC_022047	TAGAGG	2	12	14758	14769	33.33 %	16.67 %	50 %	0 %	530314138
7	NC_022047	AAATAT	2	12	15453	15464	66.67 %	33.33 %	0 %	0 %	530314139
8	NC_022047	TTAAAT	2	12	17480	17491	50 %	50 %	0 %	0 %	530314140
9	NC_022047	ATCGAG	2	12	22403	22414	33.33 %	16.67 %	33.33 %	16.67 %	530314144
10	NC_022047	AATAAA	2	12	24858	24869	83.33 %	16.67 %	0 %	0 %	530314146
11	NC_022047	TTTCCT	2	12	25930	25941	0 %	66.67 %	0 %	33.33 %	530314148
12	NC_022047	GTCGAT	2	12	26416	26427	16.67 %	33.33 %	33.33 %	16.67 %	530314148
13	NC_022047	ATTTCA	2	12	26724	26735	33.33 %	50 %	0 %	16.67 %	530314148
14	NC_022047	ACAAAA	2	12	31928	31939	83.33 %	0 %	0 %	16.67 %	530314153
15	NC_022047	AAAGAA	2	12	35470	35481	83.33 %	0 %	16.67 %	0 %	530314158
16	NC_022047	ATTAAC	2	12	52582	52593	50 %	33.33 %	0 %	16.67 %	530314179
17	NC_022047	AATATA	2	12	52654	52665	66.67 %	33.33 %	0 %	0 %	530314179

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.