MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Coding Repeats of Listeria monocytogenes strain J1776 plasmid

Total Repeats: 18

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_022046	CTACTT	2	12	608	619	16.67 %	50 %	0 %	33.33 %	530314051
2	NC_022046	ATTTTC	2	12	8994	9005	16.67 %	66.67 %	0 %	16.67 %	530314060
3	NC_022046	CTCTAA	2	12	9794	9805	33.33 %	33.33 %	0 %	33.33 %	530314061
4	NC_022046	TAGAGG	2	12	9963	9974	33.33 %	16.67 %	50 %	0 %	530314061
5	NC_022046	AAATAT	2	12	10658	10669	66.67 %	33.33 %	0 %	0 %	530314062
6	NC_022046	TTAAAT	2	12	12685	12696	50 %	50 %	0 %	0 %	530314063
7	NC_022046	ATCGAG	2	12	17608	17619	33.33 %	16.67 %	33.33 %	16.67 %	530314067
8	NC_022046	AATAAA	2	12	20063	20074	83.33 %	16.67 %	0 %	0 %	530314069
9	NC_022046	TTTCCT	2	12	21135	21146	0 %	66.67 %	0 %	33.33 %	530314071
10	NC_022046	GTCGAT	2	12	21621	21632	16.67 %	33.33 %	33.33 %	16.67 %	530314071
11	NC_022046	ATTTCA	2	12	21929	21940	33.33 %	50 %	0 %	16.67 %	530314071
12	NC_022046	ACAAAA	2	12	27133	27144	83.33 %	0 %	0 %	16.67 %	530314076
13	NC_022046	AAAGAA	2	12	30675	30686	83.33 %	0 %	16.67 %	0 %	530314081
14	NC_022046	ATTAAC	2	12	47787	47798	50 %	33.33 %	0 %	16.67 %	530314102
15	NC_022046	AATATA	2	12	47859	47870	66.67 %	33.33 %	0 %	0 %	530314102
16	NC_022046	AGATAA	2	12	51222	51233	66.67 %	16.67 %	16.67 %	0 %	530314104
17	NC_022046	CGCCTG	2	12	54815	54826	0 %	16.67 %	33.33 %	50 %	530314050
18	NC_022046	TGAAGC	2	12	55769	55780	33.33 %	16.67 %	33.33 %	16.67 %	530314050

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.