MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Streptomyces collinus Tu 365 plasmid pSCO2

Total Repeats: 66

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021986	CGC	2	6	24	29	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_021986	CGC	2	6	101	106	0 %	0 %	33.33 %	66.67 %	Non-Coding
3	NC_021986	GTC	2	6	151	156	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_021986	GCC	2	6	256	261	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_021986	CGG	2	6	332	337	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_021986	CGC	2	6	409	414	0 %	0 %	33.33 %	66.67 %	Non-Coding
7	NC_021986	GGC	2	6	563	568	0 %	0 %	66.67 %	33.33 %	Non-Coding
8	NC_021986	GCC	2	6	666	671	0 %	0 %	33.33 %	66.67 %	Non-Coding
9	NC_021986	GAC	2	6	746	751	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_021986	GCC	2	6	958	963	0 %	0 %	33.33 %	66.67 %	Non-Coding
11	NC_021986	CCT	2	6	1109	1114	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_021986	GAC	2	6	3884	3889	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13	NC_021986	GCA	3	9	4248	4256	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_021986	GCC	2	6	5467	5472	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_021986	TCG	2	6	5501	5506	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_021986	CGG	2	6	5689	5694	0 %	0 %	66.67 %	33.33 %	Non-Coding
17	NC_021986	GTC	2	6	5772	5777	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_021986	GTC	2	6	5808	5813	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_021986	AGC	3	9	6679	6687	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
20	NC_021986	GAC	2	6	6692	6697	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_021986	CCG	2	6	6706	6711	0 %	0 %	33.33 %	66.67 %	Non-Coding
22	NC_021986	GCC	2	6	6742	6747	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_021986	CAG	2	6	6750	6755	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_021986	ACG	2	6	6757	6762	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_021986	CCG	2	6	7998	8003	0 %	0 %	33.33 %	66.67 %	Non-Coding
26	NC_021986	CGT	3	9	8052	8060	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_021986	TCG	4	12	8756	8767	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
28	NC_021986	CAT	2	6	8769	8774	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_021986	GCC	2	6	8812	8817	0 %	0 %	33.33 %	66.67 %	Non-Coding
30	NC_021986	CAT	2	6	8835	8840	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_021986	CCG	2	6	8846	8851	0 %	0 %	33.33 %	66.67 %	Non-Coding
32	NC_021986	GCC	2	6	8925	8930	0 %	0 %	33.33 %	66.67 %	Non-Coding
33	NC_021986	CAT	2	6	8959	8964	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_021986	GAC	2	6	9876	9881	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_021986	GTC	2	6	9893	9898	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_021986	GAC	2	6	10215	10220	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_021986	CCG	2	6	10222	10227	0 %	0 %	33.33 %	66.67 %	Non-Coding
38	NC_021986	CCG	2	6	10238	10243	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_021986	CCA	2	6	10728	10733	33.33 %	0 %	0 %	66.67 %	Non-Coding
40	NC_021986	CGT	2	6	13322	13327	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_021986	TGC	2	6	13428	13433	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_021986	GTC	2	6	13475	13480	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_021986	GAC	2	6	13486	13491	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NC_021986	CGT	2	6	13537	13542	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
45	NC_021986	GGA	2	6	15683	15688	33.33 %	0 %	66.67 %	0 %	Non-Coding
46	NC_021986	CGT	2	6	16441	16446	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_021986	CCA	2	6	16483	16488	33.33 %	0 %	0 %	66.67 %	Non-Coding
48	NC_021986	TGG	2	6	16524	16529	0 %	33.33 %	66.67 %	0 %	Non-Coding
49	NC_021986	CCG	2	6	16578	16583	0 %	0 %	33.33 %	66.67 %	Non-Coding
50	NC_021986	GTG	2	6	16856	16861	0 %	33.33 %	66.67 %	0 %	Non-Coding
51	NC_021986	GCA	2	6	17002	17007	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
52	NC_021986	CAC	2	6	17044	17049	33.33 %	0 %	0 %	66.67 %	Non-Coding
53	NC_021986	GGC	2	6	17050	17055	0 %	0 %	66.67 %	33.33 %	Non-Coding
54	NC_021986	AAC	2	6	17062	17067	66.67 %	0 %	0 %	33.33 %	Non-Coding
55	NC_021986	GCC	2	6	17088	17093	0 %	0 %	33.33 %	66.67 %	Non-Coding
56	NC_021986	CGA	2	6	17119	17124	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
57	NC_021986	GCC	2	6	17128	17133	0 %	0 %	33.33 %	66.67 %	Non-Coding
58	NC_021986	GCG	2	6	17151	17156	0 %	0 %	66.67 %	33.33 %	Non-Coding
59	NC_021986	GCA	2	6	18764	18769	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_021986	CGG	2	6	18827	18832	0 %	0 %	66.67 %	33.33 %	Non-Coding
61	NC_021986	GCC	2	6	18847	18852	0 %	0 %	33.33 %	66.67 %	Non-Coding
62	NC_021986	GGC	2	6	18922	18927	0 %	0 %	66.67 %	33.33 %	Non-Coding
63	NC_021986	GCC	2	6	18985	18990	0 %	0 %	33.33 %	66.67 %	Non-Coding
64	NC_021986	CAC	2	6	19174	19179	33.33 %	0 %	0 %	66.67 %	Non-Coding
65	NC_021986	CCG	2	6	19230	19235	0 %	0 %	33.33 %	66.67 %	Non-Coding
66	NC_021986	CGG	2	6	19253	19258	0 %	0 %	66.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.