MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Halorhabdus tiamatea SARL4B plasmid pHTIA complete sequence

Total Repeats: 24

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021913	GTGACC	2	12	3089	3100	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
2	NC_021913	CGTTGG	2	12	4182	4193	0 %	33.33 %	50 %	16.67 %	Non-Coding
3	NC_021913	CTGTTG	2	12	7200	7211	0 %	50 %	33.33 %	16.67 %	Non-Coding
4	NC_021913	GAATCA	2	12	12614	12625	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
5	NC_021913	AATCTT	2	12	18847	18858	33.33 %	50 %	0 %	16.67 %	Non-Coding
6	NC_021913	TCAGGC	2	12	30182	30193	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
7	NC_021913	ACGATC	2	12	53265	53276	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
8	NC_021913	TATGAT	2	12	62983	62994	33.33 %	50 %	16.67 %	0 %	Non-Coding
9	NC_021913	TCCGGA	2	12	115790	115801	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
10	NC_021913	TCATCG	2	12	141463	141474	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
11	NC_021913	GTCATC	2	12	175422	175433	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
12	NC_021913	GCTCGA	2	12	184208	184219	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
13	NC_021913	GGTTCT	2	12	189151	189162	0 %	50 %	33.33 %	16.67 %	Non-Coding
14	NC_021913	GTCTGG	2	12	190668	190679	0 %	33.33 %	50 %	16.67 %	Non-Coding
15	NC_021913	TCGAAT	2	12	195771	195782	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
16	NC_021913	GCGAGT	2	12	212371	212382	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
17	NC_021913	CGGGCG	2	12	257140	257151	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_021913	CGACAG	2	12	271354	271365	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_021913	GAGGAT	2	12	271998	272009	33.33 %	16.67 %	50 %	0 %	Non-Coding
20	NC_021913	AGGGCA	2	12	273223	273234	33.33 %	0 %	50 %	16.67 %	Non-Coding
21	NC_021913	TCATCG	2	12	274189	274200	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
22	NC_021913	GGCTGA	2	12	280487	280498	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
23	NC_021913	TCGCGT	2	12	286479	286490	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_021913	TTCTCT	2	12	312840	312851	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.