Hexa-nucleotide Coding Repeats of Halorhabdus tiamatea SARL4B plasmid pHTIA complete sequence
Total Repeats: 91
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_021913 | CCGACA | 2 | 12 | 13992 | 14003 | 33.33 % | 0 % | 16.67 % | 50 % | 529043446 |
2 | NC_021913 | GGCTGG | 2 | 12 | 14250 | 14261 | 0 % | 16.67 % | 66.67 % | 16.67 % | 529043446 |
3 | NC_021913 | TCGCTG | 2 | 12 | 15202 | 15213 | 0 % | 33.33 % | 33.33 % | 33.33 % | 529043446 |
4 | NC_021913 | CATATC | 2 | 12 | 20930 | 20941 | 33.33 % | 33.33 % | 0 % | 33.33 % | 529043448 |
5 | NC_021913 | TAAGTG | 2 | 12 | 22382 | 22393 | 33.33 % | 33.33 % | 33.33 % | 0 % | 529043448 |
6 | NC_021913 | AACACG | 2 | 12 | 25766 | 25777 | 50 % | 0 % | 16.67 % | 33.33 % | 529043451 |
7 | NC_021913 | CTCGCG | 2 | 12 | 37244 | 37255 | 0 % | 16.67 % | 33.33 % | 50 % | 529043465 |
8 | NC_021913 | ACGGTC | 2 | 12 | 39824 | 39835 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043468 |
9 | NC_021913 | GGAGAC | 2 | 12 | 48141 | 48152 | 33.33 % | 0 % | 50 % | 16.67 % | 529043476 |
10 | NC_021913 | CTGTCG | 2 | 12 | 49235 | 49246 | 0 % | 33.33 % | 33.33 % | 33.33 % | 529043476 |
11 | NC_021913 | GCCGTC | 2 | 12 | 56992 | 57003 | 0 % | 16.67 % | 33.33 % | 50 % | 529043485 |
12 | NC_021913 | CGTCGA | 2 | 12 | 57096 | 57107 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043485 |
13 | NC_021913 | CGTGAT | 2 | 12 | 62117 | 62128 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043491 |
14 | NC_021913 | ACGAGG | 2 | 12 | 68841 | 68852 | 33.33 % | 0 % | 50 % | 16.67 % | 529043498 |
15 | NC_021913 | ACGACC | 2 | 12 | 69167 | 69178 | 33.33 % | 0 % | 16.67 % | 50 % | 529043498 |
16 | NC_021913 | TGTCGT | 2 | 12 | 70670 | 70681 | 0 % | 50 % | 33.33 % | 16.67 % | 529043500 |
17 | NC_021913 | CGTTCG | 2 | 12 | 71353 | 71364 | 0 % | 33.33 % | 33.33 % | 33.33 % | 529043501 |
18 | NC_021913 | GGTCGA | 2 | 12 | 71825 | 71836 | 16.67 % | 16.67 % | 50 % | 16.67 % | 529043501 |
19 | NC_021913 | AAATCC | 2 | 12 | 73383 | 73394 | 50 % | 16.67 % | 0 % | 33.33 % | 529043505 |
20 | NC_021913 | CCCTTG | 2 | 12 | 77279 | 77290 | 0 % | 33.33 % | 16.67 % | 50 % | 529043507 |
21 | NC_021913 | GACGAA | 2 | 12 | 80721 | 80732 | 50 % | 0 % | 33.33 % | 16.67 % | 529043510 |
22 | NC_021913 | CGTCGC | 2 | 12 | 87203 | 87214 | 0 % | 16.67 % | 33.33 % | 50 % | 529043519 |
23 | NC_021913 | CGACAG | 2 | 12 | 92904 | 92915 | 33.33 % | 0 % | 33.33 % | 33.33 % | 529043527 |
24 | NC_021913 | CGAAGG | 2 | 12 | 96808 | 96819 | 33.33 % | 0 % | 50 % | 16.67 % | 529043530 |
25 | NC_021913 | CACGAT | 2 | 12 | 102561 | 102572 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 529043534 |
26 | NC_021913 | AGCGCG | 2 | 12 | 108124 | 108135 | 16.67 % | 0 % | 50 % | 33.33 % | 529043537 |
27 | NC_021913 | GTCGCC | 2 | 12 | 108627 | 108638 | 0 % | 16.67 % | 33.33 % | 50 % | 529043538 |
28 | NC_021913 | CGGCCA | 2 | 12 | 111839 | 111850 | 16.67 % | 0 % | 33.33 % | 50 % | 529043541 |
29 | NC_021913 | CGTTCG | 2 | 12 | 116665 | 116676 | 0 % | 33.33 % | 33.33 % | 33.33 % | 529043542 |
30 | NC_021913 | CCAGTC | 2 | 12 | 118159 | 118170 | 16.67 % | 16.67 % | 16.67 % | 50 % | 529043544 |
31 | NC_021913 | CGACCG | 2 | 12 | 120470 | 120481 | 16.67 % | 0 % | 33.33 % | 50 % | 529043546 |
32 | NC_021913 | GCGACA | 2 | 12 | 123506 | 123517 | 33.33 % | 0 % | 33.33 % | 33.33 % | 529043549 |
33 | NC_021913 | TCGGCG | 2 | 12 | 123637 | 123648 | 0 % | 16.67 % | 50 % | 33.33 % | 529043549 |
34 | NC_021913 | CGTGCG | 2 | 12 | 125154 | 125165 | 0 % | 16.67 % | 50 % | 33.33 % | 529043549 |
35 | NC_021913 | GGTCGG | 2 | 12 | 126114 | 126125 | 0 % | 16.67 % | 66.67 % | 16.67 % | 529043550 |
36 | NC_021913 | GACCGC | 2 | 12 | 127424 | 127435 | 16.67 % | 0 % | 33.33 % | 50 % | 529043551 |
37 | NC_021913 | GCCGAG | 2 | 12 | 130939 | 130950 | 16.67 % | 0 % | 50 % | 33.33 % | 529043552 |
38 | NC_021913 | TCGAAC | 2 | 12 | 131798 | 131809 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 529043552 |
39 | NC_021913 | CTTCGA | 2 | 12 | 132066 | 132077 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 529043552 |
40 | NC_021913 | ACGGCT | 2 | 12 | 133867 | 133878 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043554 |
41 | NC_021913 | CGTCTC | 2 | 12 | 135173 | 135184 | 0 % | 33.33 % | 16.67 % | 50 % | 529043556 |
42 | NC_021913 | CGAACG | 2 | 12 | 139791 | 139802 | 33.33 % | 0 % | 33.33 % | 33.33 % | 529043558 |
43 | NC_021913 | CGGTCA | 2 | 12 | 141597 | 141608 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043560 |
44 | NC_021913 | CGCCGG | 2 | 12 | 145240 | 145251 | 0 % | 0 % | 50 % | 50 % | 529043562 |
45 | NC_021913 | GCTACG | 2 | 12 | 146922 | 146933 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043562 |
46 | NC_021913 | GATCGT | 2 | 12 | 147127 | 147138 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043562 |
47 | NC_021913 | TCGTTC | 2 | 12 | 148111 | 148122 | 0 % | 50 % | 16.67 % | 33.33 % | 529043563 |
48 | NC_021913 | TCTTCG | 2 | 12 | 149494 | 149505 | 0 % | 50 % | 16.67 % | 33.33 % | 529043564 |
49 | NC_021913 | GAGACG | 2 | 12 | 152364 | 152375 | 33.33 % | 0 % | 50 % | 16.67 % | 529043568 |
50 | NC_021913 | TCCCGA | 2 | 12 | 163516 | 163527 | 16.67 % | 16.67 % | 16.67 % | 50 % | 529043574 |
51 | NC_021913 | GAGCGA | 2 | 12 | 163528 | 163539 | 33.33 % | 0 % | 50 % | 16.67 % | 529043574 |
52 | NC_021913 | TGTCGA | 2 | 12 | 164314 | 164325 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043574 |
53 | NC_021913 | TCCAGC | 2 | 12 | 164355 | 164366 | 16.67 % | 16.67 % | 16.67 % | 50 % | 529043574 |
54 | NC_021913 | CATTCG | 2 | 12 | 168091 | 168102 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 529043577 |
55 | NC_021913 | TCGGTG | 2 | 12 | 173784 | 173795 | 0 % | 33.33 % | 50 % | 16.67 % | 529043582 |
56 | NC_021913 | ACCGCG | 2 | 12 | 174444 | 174455 | 16.67 % | 0 % | 33.33 % | 50 % | 529043583 |
57 | NC_021913 | TGTCGA | 2 | 12 | 193766 | 193777 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043601 |
58 | NC_021913 | ACTGCC | 2 | 12 | 199755 | 199766 | 16.67 % | 16.67 % | 16.67 % | 50 % | 529043606 |
59 | NC_021913 | ACGTCG | 2 | 12 | 202086 | 202097 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043608 |
60 | NC_021913 | TCGACG | 2 | 12 | 202738 | 202749 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043610 |
61 | NC_021913 | GACGTC | 2 | 12 | 204901 | 204912 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043613 |
62 | NC_021913 | CAGATC | 2 | 12 | 206228 | 206239 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 529043614 |
63 | NC_021913 | GAGACT | 2 | 12 | 210203 | 210214 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 529043619 |
64 | NC_021913 | CTTCGA | 2 | 12 | 214320 | 214331 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 529043626 |
65 | NC_021913 | GTTCGA | 2 | 12 | 216860 | 216871 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043630 |
66 | NC_021913 | TTCGAC | 2 | 12 | 217068 | 217079 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 529043630 |
67 | NC_021913 | AGGAAC | 2 | 12 | 218579 | 218590 | 50 % | 0 % | 33.33 % | 16.67 % | 529043631 |
68 | NC_021913 | TCGCAT | 2 | 12 | 222490 | 222501 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 529043635 |
69 | NC_021913 | GCGTCC | 2 | 12 | 224214 | 224225 | 0 % | 16.67 % | 33.33 % | 50 % | 529043637 |
70 | NC_021913 | GCTTGA | 2 | 12 | 235958 | 235969 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043648 |
71 | NC_021913 | AGCGTA | 2 | 12 | 247402 | 247413 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 529043656 |
72 | NC_021913 | TAGTCG | 2 | 12 | 247706 | 247717 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043656 |
73 | NC_021913 | GACGCC | 2 | 12 | 260192 | 260203 | 16.67 % | 0 % | 33.33 % | 50 % | 529043668 |
74 | NC_021913 | GACGTC | 2 | 12 | 260588 | 260599 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043668 |
75 | NC_021913 | GTCAAC | 2 | 12 | 262922 | 262933 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 529043670 |
76 | NC_021913 | CTCGGA | 2 | 12 | 262982 | 262993 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043670 |
77 | NC_021913 | GAAGCA | 2 | 12 | 266029 | 266040 | 50 % | 0 % | 33.33 % | 16.67 % | 529043675 |
78 | NC_021913 | ACGGCG | 2 | 12 | 273934 | 273945 | 16.67 % | 0 % | 50 % | 33.33 % | 529043679 |
79 | NC_021913 | TCGCGG | 2 | 12 | 274320 | 274331 | 0 % | 16.67 % | 50 % | 33.33 % | 529043680 |
80 | NC_021913 | ACCGCG | 2 | 12 | 275269 | 275280 | 16.67 % | 0 % | 33.33 % | 50 % | 529043681 |
81 | NC_021913 | GGAGCT | 2 | 12 | 278150 | 278161 | 16.67 % | 16.67 % | 50 % | 16.67 % | 529043683 |
82 | NC_021913 | GCGACG | 2 | 12 | 285457 | 285468 | 16.67 % | 0 % | 50 % | 33.33 % | 529043691 |
83 | NC_021913 | AAATCC | 2 | 12 | 290241 | 290252 | 50 % | 16.67 % | 0 % | 33.33 % | 529043695 |
84 | NC_021913 | CGTCGA | 2 | 12 | 290614 | 290625 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043696 |
85 | NC_021913 | CGCCGG | 2 | 12 | 298385 | 298396 | 0 % | 0 % | 50 % | 50 % | 529043701 |
86 | NC_021913 | GATCGT | 2 | 12 | 300272 | 300283 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 529043701 |
87 | NC_021913 | TCGGCG | 2 | 12 | 306986 | 306997 | 0 % | 16.67 % | 50 % | 33.33 % | 529043704 |
88 | NC_021913 | GATGCC | 2 | 12 | 308309 | 308320 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 529043705 |
89 | NC_021913 | GCTGTT | 2 | 12 | 309272 | 309283 | 0 % | 50 % | 33.33 % | 16.67 % | 529043705 |
90 | NC_021913 | GAACTC | 2 | 12 | 311276 | 311287 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 529043706 |
91 | NC_021913 | CGTTTC | 2 | 12 | 323160 | 323171 | 0 % | 50 % | 16.67 % | 33.33 % | 529043714 |