MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e

Total Repeats: 44

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021909	GAGGGA	2	12	2714	2725	33.33 %	0 %	66.67 %	0 %	Non-Coding
2	NC_021909	CGCGGT	2	12	13048	13059	0 %	16.67 %	50 %	33.33 %	Non-Coding
3	NC_021909	GCCGGA	2	12	51939	51950	16.67 %	0 %	50 %	33.33 %	Non-Coding
4	NC_021909	TCGGAA	2	12	55383	55394	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
5	NC_021909	CAGCGC	2	12	56419	56430	16.67 %	0 %	33.33 %	50 %	Non-Coding
6	NC_021909	GGCGAC	2	12	58051	58062	16.67 %	0 %	50 %	33.33 %	Non-Coding
7	NC_021909	GCCCTC	2	12	75682	75693	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
8	NC_021909	GGTTGC	2	12	98804	98815	0 %	33.33 %	50 %	16.67 %	Non-Coding
9	NC_021909	GCCGGA	2	12	99982	99993	16.67 %	0 %	50 %	33.33 %	Non-Coding
10	NC_021909	GAAGCG	2	12	108274	108285	33.33 %	0 %	50 %	16.67 %	Non-Coding
11	NC_021909	GTTAGA	2	12	118811	118822	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_021909	TTTCAT	2	12	126940	126951	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
13	NC_021909	GATTGC	2	12	151434	151445	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
14	NC_021909	TGGAAC	2	12	168968	168979	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
15	NC_021909	GGATCG	2	12	192426	192437	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
16	NC_021909	GTTCGC	2	12	193804	193815	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_021909	GAACCA	2	12	210458	210469	50 %	0 %	16.67 %	33.33 %	Non-Coding
18	NC_021909	GGTCTT	2	12	212108	212119	0 %	50 %	33.33 %	16.67 %	Non-Coding
19	NC_021909	GAACCA	2	12	221249	221260	50 %	0 %	16.67 %	33.33 %	Non-Coding
20	NC_021909	TCCGGA	2	12	221497	221508	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
21	NC_021909	GGCTCC	2	12	222129	222140	0 %	16.67 %	33.33 %	50 %	Non-Coding
22	NC_021909	CACGCG	2	12	226800	226811	16.67 %	0 %	33.33 %	50 %	Non-Coding
23	NC_021909	GATCAG	2	12	231234	231245	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
24	NC_021909	TCTTGA	2	12	241237	241248	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
25	NC_021909	GCCGAA	2	12	250762	250773	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
26	NC_021909	AGCCGA	2	12	298670	298681	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
27	NC_021909	GAAGCA	2	12	322726	322737	50 %	0 %	33.33 %	16.67 %	Non-Coding
28	NC_021909	GCCCCT	2	12	335667	335678	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
29	NC_021909	AGAAAA	2	12	384377	384388	83.33 %	0 %	16.67 %	0 %	Non-Coding
30	NC_021909	GGCTTG	2	12	385957	385968	0 %	33.33 %	50 %	16.67 %	Non-Coding
31	NC_021909	GAAGGA	2	12	387443	387454	50 %	0 %	50 %	0 %	Non-Coding
32	NC_021909	CGAATG	2	12	388621	388632	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
33	NC_021909	CCGGTA	2	12	393421	393432	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
34	NC_021909	GACGGC	2	12	396346	396357	16.67 %	0 %	50 %	33.33 %	Non-Coding
35	NC_021909	CGCTGG	2	12	405993	406004	0 %	16.67 %	50 %	33.33 %	Non-Coding
36	NC_021909	TTTTAA	2	12	415037	415048	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_021909	GGCGAA	2	12	426823	426834	33.33 %	0 %	50 %	16.67 %	Non-Coding
38	NC_021909	AAGGCT	2	12	494782	494793	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
39	NC_021909	CGTTGG	2	12	500721	500732	0 %	33.33 %	50 %	16.67 %	Non-Coding
40	NC_021909	GCCACG	2	12	512121	512132	16.67 %	0 %	33.33 %	50 %	Non-Coding
41	NC_021909	GTTGCT	2	12	518006	518017	0 %	50 %	33.33 %	16.67 %	Non-Coding
42	NC_021909	CACTAT	2	12	530178	530189	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_021909	CGCGGG	2	12	579775	579786	0 %	0 %	66.67 %	33.33 %	Non-Coding
44	NC_021909	ATGGCG	2	12	611289	611300	16.67 %	16.67 %	50 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.