Penta-nucleotide Repeats of Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1b
Total Repeats: 164
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_021907 | ACGGC | 2 | 10 | 1743 | 1752 | 20 % | 0 % | 40 % | 40 % | 528831101 |
2 | NC_021907 | GCAGG | 2 | 10 | 2274 | 2283 | 20 % | 0 % | 60 % | 20 % | 528831102 |
3 | NC_021907 | ACCGC | 2 | 10 | 3919 | 3928 | 20 % | 0 % | 20 % | 60 % | 528831103 |
4 | NC_021907 | GCCGC | 2 | 10 | 5694 | 5703 | 0 % | 0 % | 40 % | 60 % | 528831105 |
5 | NC_021907 | GGCAT | 2 | 10 | 6943 | 6952 | 20 % | 20 % | 40 % | 20 % | 528831106 |
6 | NC_021907 | ATGAG | 2 | 10 | 8913 | 8922 | 40 % | 20 % | 40 % | 0 % | 528831108 |
7 | NC_021907 | GGGGA | 2 | 10 | 9542 | 9551 | 20 % | 0 % | 80 % | 0 % | 528831108 |
8 | NC_021907 | CCGAT | 2 | 10 | 9798 | 9807 | 20 % | 20 % | 20 % | 40 % | 528831108 |
9 | NC_021907 | GGATT | 2 | 10 | 10325 | 10334 | 20 % | 40 % | 40 % | 0 % | 528831109 |
10 | NC_021907 | CGGCA | 2 | 10 | 16619 | 16628 | 20 % | 0 % | 40 % | 40 % | 528831120 |
11 | NC_021907 | GCAGA | 2 | 10 | 20291 | 20300 | 40 % | 0 % | 40 % | 20 % | 528831123 |
12 | NC_021907 | CGCGA | 2 | 10 | 24059 | 24068 | 20 % | 0 % | 40 % | 40 % | 528831127 |
13 | NC_021907 | CGGAC | 2 | 10 | 25766 | 25775 | 20 % | 0 % | 40 % | 40 % | 528831129 |
14 | NC_021907 | TTCAT | 2 | 10 | 27761 | 27770 | 20 % | 60 % | 0 % | 20 % | 528831131 |
15 | NC_021907 | AGGCG | 2 | 10 | 28006 | 28015 | 20 % | 0 % | 60 % | 20 % | 528831131 |
16 | NC_021907 | GCCGC | 2 | 10 | 30138 | 30147 | 0 % | 0 % | 40 % | 60 % | 528831133 |
17 | NC_021907 | AGGGC | 2 | 10 | 30156 | 30165 | 20 % | 0 % | 60 % | 20 % | 528831133 |
18 | NC_021907 | TCATC | 2 | 10 | 30279 | 30288 | 20 % | 40 % | 0 % | 40 % | 528831133 |
19 | NC_021907 | CTCAT | 2 | 10 | 30428 | 30437 | 20 % | 40 % | 0 % | 40 % | 528831133 |
20 | NC_021907 | ACGAA | 2 | 10 | 30805 | 30814 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
21 | NC_021907 | GGCCC | 2 | 10 | 31659 | 31668 | 0 % | 0 % | 40 % | 60 % | 528831136 |
22 | NC_021907 | GCCGT | 2 | 10 | 31722 | 31731 | 0 % | 20 % | 40 % | 40 % | 528831136 |
23 | NC_021907 | CAGCG | 2 | 10 | 32966 | 32975 | 20 % | 0 % | 40 % | 40 % | 528831137 |
24 | NC_021907 | GGCCG | 2 | 10 | 35655 | 35664 | 0 % | 0 % | 60 % | 40 % | 528831140 |
25 | NC_021907 | GTCGG | 2 | 10 | 36662 | 36671 | 0 % | 20 % | 60 % | 20 % | 528831140 |
26 | NC_021907 | CCGAA | 2 | 10 | 40378 | 40387 | 40 % | 0 % | 20 % | 40 % | 528831143 |
27 | NC_021907 | GGCGC | 2 | 10 | 41216 | 41225 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
28 | NC_021907 | CGATG | 2 | 10 | 42122 | 42131 | 20 % | 20 % | 40 % | 20 % | 528831144 |
29 | NC_021907 | ATCGT | 2 | 10 | 42247 | 42256 | 20 % | 40 % | 20 % | 20 % | 528831144 |
30 | NC_021907 | GCGCC | 2 | 10 | 43070 | 43079 | 0 % | 0 % | 40 % | 60 % | 528831144 |
31 | NC_021907 | TTGAA | 2 | 10 | 44356 | 44365 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
32 | NC_021907 | TTGCT | 2 | 10 | 46689 | 46698 | 0 % | 60 % | 20 % | 20 % | 528831148 |
33 | NC_021907 | GCCCG | 2 | 10 | 47536 | 47545 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
34 | NC_021907 | GGGCA | 2 | 10 | 48512 | 48521 | 20 % | 0 % | 60 % | 20 % | 528831149 |
35 | NC_021907 | AGCGA | 2 | 10 | 48784 | 48793 | 40 % | 0 % | 40 % | 20 % | 528831149 |
36 | NC_021907 | CCGGC | 2 | 10 | 49506 | 49515 | 0 % | 0 % | 40 % | 60 % | 528831150 |
37 | NC_021907 | CGGCG | 2 | 10 | 50612 | 50621 | 0 % | 0 % | 60 % | 40 % | 528831151 |
38 | NC_021907 | CCTCG | 2 | 10 | 51150 | 51159 | 0 % | 20 % | 20 % | 60 % | 528831152 |
39 | NC_021907 | TCGAT | 2 | 10 | 51912 | 51921 | 20 % | 40 % | 20 % | 20 % | 528831152 |
40 | NC_021907 | TGAAG | 2 | 10 | 54448 | 54457 | 40 % | 20 % | 40 % | 0 % | 528831153 |
41 | NC_021907 | TCCCG | 2 | 10 | 54468 | 54477 | 0 % | 20 % | 20 % | 60 % | 528831153 |
42 | NC_021907 | GCCGC | 2 | 10 | 55692 | 55701 | 0 % | 0 % | 40 % | 60 % | 528831154 |
43 | NC_021907 | ATGCC | 2 | 10 | 57401 | 57410 | 20 % | 20 % | 20 % | 40 % | 528831155 |
44 | NC_021907 | GGCAG | 2 | 10 | 63497 | 63506 | 20 % | 0 % | 60 % | 20 % | 528831160 |
45 | NC_021907 | GGCGA | 2 | 10 | 65425 | 65434 | 20 % | 0 % | 60 % | 20 % | 528831162 |
46 | NC_021907 | TCGTG | 2 | 10 | 65569 | 65578 | 0 % | 40 % | 40 % | 20 % | 528831163 |
47 | NC_021907 | AGCGC | 2 | 10 | 66596 | 66605 | 20 % | 0 % | 40 % | 40 % | 528831164 |
48 | NC_021907 | TGGCG | 2 | 10 | 67292 | 67301 | 0 % | 20 % | 60 % | 20 % | 528831165 |
49 | NC_021907 | GGCGC | 2 | 10 | 67852 | 67861 | 0 % | 0 % | 60 % | 40 % | 528831166 |
50 | NC_021907 | ATCGC | 2 | 10 | 69715 | 69724 | 20 % | 20 % | 20 % | 40 % | 528831167 |
51 | NC_021907 | CTGCC | 2 | 10 | 69948 | 69957 | 0 % | 20 % | 20 % | 60 % | 528831167 |
52 | NC_021907 | GGGGC | 2 | 10 | 70185 | 70194 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
53 | NC_021907 | GCCGC | 2 | 10 | 72827 | 72836 | 0 % | 0 % | 40 % | 60 % | 528831170 |
54 | NC_021907 | GATCC | 2 | 10 | 74159 | 74168 | 20 % | 20 % | 20 % | 40 % | 528831171 |
55 | NC_021907 | CGGCG | 2 | 10 | 78277 | 78286 | 0 % | 0 % | 60 % | 40 % | 528831175 |
56 | NC_021907 | GATCG | 2 | 10 | 79420 | 79429 | 20 % | 20 % | 40 % | 20 % | 528831176 |
57 | NC_021907 | GATGC | 2 | 10 | 79649 | 79658 | 20 % | 20 % | 40 % | 20 % | 528831176 |
58 | NC_021907 | ACCCG | 2 | 10 | 83035 | 83044 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
59 | NC_021907 | TCGGC | 2 | 10 | 85555 | 85564 | 0 % | 20 % | 40 % | 40 % | 528831182 |
60 | NC_021907 | GAAGC | 2 | 10 | 91782 | 91791 | 40 % | 0 % | 40 % | 20 % | 528831185 |
61 | NC_021907 | GGGTT | 2 | 10 | 92549 | 92558 | 0 % | 40 % | 60 % | 0 % | 528831185 |
62 | NC_021907 | AAACG | 2 | 10 | 94764 | 94773 | 60 % | 0 % | 20 % | 20 % | 528831187 |
63 | NC_021907 | CGGGG | 2 | 10 | 96199 | 96208 | 0 % | 0 % | 80 % | 20 % | 528831188 |
64 | NC_021907 | GAAAT | 2 | 10 | 96499 | 96508 | 60 % | 20 % | 20 % | 0 % | 528831188 |
65 | NC_021907 | CCGCG | 2 | 10 | 102589 | 102598 | 0 % | 0 % | 40 % | 60 % | 528831195 |
66 | NC_021907 | AGCCG | 2 | 10 | 102628 | 102637 | 20 % | 0 % | 40 % | 40 % | 528831195 |
67 | NC_021907 | CGGCA | 2 | 10 | 102821 | 102830 | 20 % | 0 % | 40 % | 40 % | 528831195 |
68 | NC_021907 | CCGAG | 2 | 10 | 104239 | 104248 | 20 % | 0 % | 40 % | 40 % | 528831196 |
69 | NC_021907 | GTCAG | 2 | 10 | 104852 | 104861 | 20 % | 20 % | 40 % | 20 % | 528831197 |
70 | NC_021907 | CGCGC | 2 | 10 | 107498 | 107507 | 0 % | 0 % | 40 % | 60 % | 528831199 |
71 | NC_021907 | CATGC | 2 | 10 | 107629 | 107638 | 20 % | 20 % | 20 % | 40 % | 528831199 |
72 | NC_021907 | GCCTC | 2 | 10 | 108073 | 108082 | 0 % | 20 % | 20 % | 60 % | 528831200 |
73 | NC_021907 | CGGCG | 2 | 10 | 109164 | 109173 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
74 | NC_021907 | CATGG | 2 | 10 | 109788 | 109797 | 20 % | 20 % | 40 % | 20 % | 528831202 |
75 | NC_021907 | CGCGG | 2 | 10 | 111452 | 111461 | 0 % | 0 % | 60 % | 40 % | 528831202 |
76 | NC_021907 | CAACT | 2 | 10 | 111645 | 111654 | 40 % | 20 % | 0 % | 40 % | 528831202 |
77 | NC_021907 | CGCGC | 2 | 10 | 111721 | 111730 | 0 % | 0 % | 40 % | 60 % | 528831202 |
78 | NC_021907 | TTCGG | 2 | 10 | 112351 | 112360 | 0 % | 40 % | 40 % | 20 % | 528831202 |
79 | NC_021907 | TGGAA | 2 | 10 | 112391 | 112400 | 40 % | 20 % | 40 % | 0 % | 528831202 |
80 | NC_021907 | AGAGG | 2 | 10 | 114245 | 114254 | 40 % | 0 % | 60 % | 0 % | 528831202 |
81 | NC_021907 | TCGGA | 2 | 10 | 116362 | 116371 | 20 % | 20 % | 40 % | 20 % | 528831204 |
82 | NC_021907 | AGATC | 2 | 10 | 117813 | 117822 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
83 | NC_021907 | TGAAA | 2 | 10 | 120321 | 120330 | 60 % | 20 % | 20 % | 0 % | 528831205 |
84 | NC_021907 | GAATG | 2 | 10 | 123446 | 123455 | 40 % | 20 % | 40 % | 0 % | 528831209 |
85 | NC_021907 | TGATC | 2 | 10 | 124917 | 124926 | 20 % | 40 % | 20 % | 20 % | 528831210 |
86 | NC_021907 | TGCGC | 2 | 10 | 126526 | 126535 | 0 % | 20 % | 40 % | 40 % | 528831211 |
87 | NC_021907 | GTCAG | 2 | 10 | 127273 | 127282 | 20 % | 20 % | 40 % | 20 % | 528831211 |
88 | NC_021907 | TCCCC | 2 | 10 | 128152 | 128161 | 0 % | 20 % | 0 % | 80 % | 528831212 |
89 | NC_021907 | TGCGG | 2 | 10 | 130212 | 130221 | 0 % | 20 % | 60 % | 20 % | 528831214 |
90 | NC_021907 | CGTCA | 2 | 10 | 130518 | 130527 | 20 % | 20 % | 20 % | 40 % | 528831214 |
91 | NC_021907 | CGCGG | 2 | 10 | 130704 | 130713 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
92 | NC_021907 | CGGCA | 2 | 10 | 130857 | 130866 | 20 % | 0 % | 40 % | 40 % | 528831215 |
93 | NC_021907 | GCACG | 2 | 10 | 133291 | 133300 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
94 | NC_021907 | TCCGC | 2 | 10 | 138890 | 138899 | 0 % | 20 % | 20 % | 60 % | 528831226 |
95 | NC_021907 | TCGCT | 2 | 10 | 139105 | 139114 | 0 % | 40 % | 20 % | 40 % | 528831226 |
96 | NC_021907 | CGAAG | 2 | 10 | 141344 | 141353 | 40 % | 0 % | 40 % | 20 % | 528831228 |
97 | NC_021907 | CTTGC | 2 | 10 | 143203 | 143212 | 0 % | 40 % | 20 % | 40 % | 528831230 |
98 | NC_021907 | GCGAT | 2 | 10 | 146346 | 146355 | 20 % | 20 % | 40 % | 20 % | 528831233 |
99 | NC_021907 | GCGTG | 2 | 10 | 147757 | 147766 | 0 % | 20 % | 60 % | 20 % | 528831235 |
100 | NC_021907 | GGCGA | 2 | 10 | 148691 | 148700 | 20 % | 0 % | 60 % | 20 % | 528831235 |
101 | NC_021907 | TCGAT | 2 | 10 | 153811 | 153820 | 20 % | 40 % | 20 % | 20 % | 528831239 |
102 | NC_021907 | GAAGC | 2 | 10 | 159340 | 159349 | 40 % | 0 % | 40 % | 20 % | 528831244 |
103 | NC_021907 | CGGGA | 2 | 10 | 160954 | 160963 | 20 % | 0 % | 60 % | 20 % | 528831245 |
104 | NC_021907 | CGCAG | 2 | 10 | 161121 | 161130 | 20 % | 0 % | 40 % | 40 % | 528831245 |
105 | NC_021907 | CGGCA | 2 | 10 | 161922 | 161931 | 20 % | 0 % | 40 % | 40 % | 528831245 |
106 | NC_021907 | GCATC | 2 | 10 | 162273 | 162282 | 20 % | 20 % | 20 % | 40 % | 528831245 |
107 | NC_021907 | GCAAG | 2 | 10 | 163239 | 163248 | 40 % | 0 % | 40 % | 20 % | 528831246 |
108 | NC_021907 | CCCCT | 2 | 10 | 165131 | 165140 | 0 % | 20 % | 0 % | 80 % | 528831249 |
109 | NC_021907 | CCTTC | 2 | 10 | 167056 | 167065 | 0 % | 40 % | 0 % | 60 % | 528831250 |
110 | NC_021907 | CCGGG | 2 | 10 | 168655 | 168664 | 0 % | 0 % | 60 % | 40 % | 528831251 |
111 | NC_021907 | TGCCG | 2 | 10 | 170687 | 170696 | 0 % | 20 % | 40 % | 40 % | 528831253 |
112 | NC_021907 | GGCAT | 2 | 10 | 172851 | 172860 | 20 % | 20 % | 40 % | 20 % | 528831256 |
113 | NC_021907 | CGGTT | 2 | 10 | 174418 | 174427 | 0 % | 40 % | 40 % | 20 % | 528831257 |
114 | NC_021907 | GCCGG | 2 | 10 | 175852 | 175861 | 0 % | 0 % | 60 % | 40 % | 528831258 |
115 | NC_021907 | CGATG | 2 | 10 | 176586 | 176595 | 20 % | 20 % | 40 % | 20 % | 528831259 |
116 | NC_021907 | CCCTC | 2 | 10 | 177225 | 177234 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
117 | NC_021907 | GCCGT | 2 | 10 | 182868 | 182877 | 0 % | 20 % | 40 % | 40 % | 528831264 |
118 | NC_021907 | TTCAG | 2 | 10 | 186083 | 186092 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
119 | NC_021907 | AAGCT | 2 | 10 | 187605 | 187614 | 40 % | 20 % | 20 % | 20 % | 528831270 |
120 | NC_021907 | CGGGA | 2 | 10 | 187849 | 187858 | 20 % | 0 % | 60 % | 20 % | 528831271 |
121 | NC_021907 | CCCTG | 2 | 10 | 191587 | 191596 | 0 % | 20 % | 20 % | 60 % | 528831275 |
122 | NC_021907 | CATCG | 2 | 10 | 192994 | 193003 | 20 % | 20 % | 20 % | 40 % | 528831276 |
123 | NC_021907 | TTGCC | 2 | 10 | 193287 | 193296 | 0 % | 40 % | 20 % | 40 % | 528831276 |
124 | NC_021907 | TCTGC | 2 | 10 | 195651 | 195660 | 0 % | 40 % | 20 % | 40 % | 528831279 |
125 | NC_021907 | GCTCG | 2 | 10 | 197028 | 197037 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
126 | NC_021907 | TCGTG | 2 | 10 | 197070 | 197079 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
127 | NC_021907 | GGCCG | 2 | 10 | 197102 | 197111 | 0 % | 0 % | 60 % | 40 % | 528831280 |
128 | NC_021907 | CGGCA | 2 | 10 | 197239 | 197248 | 20 % | 0 % | 40 % | 40 % | 528831280 |
129 | NC_021907 | CTGCG | 2 | 10 | 197752 | 197761 | 0 % | 20 % | 40 % | 40 % | 528831280 |
130 | NC_021907 | GCAAG | 2 | 10 | 199007 | 199016 | 40 % | 0 % | 40 % | 20 % | 528831281 |
131 | NC_021907 | TCGTG | 2 | 10 | 200580 | 200589 | 0 % | 40 % | 40 % | 20 % | 528831282 |
132 | NC_021907 | CGTTC | 2 | 10 | 201304 | 201313 | 0 % | 40 % | 20 % | 40 % | 528831283 |
133 | NC_021907 | GCGTC | 2 | 10 | 203014 | 203023 | 0 % | 20 % | 40 % | 40 % | 528831285 |
134 | NC_021907 | GGCGG | 2 | 10 | 203915 | 203924 | 0 % | 0 % | 80 % | 20 % | 528831286 |
135 | NC_021907 | CCTGC | 2 | 10 | 205721 | 205730 | 0 % | 20 % | 20 % | 60 % | 528831288 |
136 | NC_021907 | CCGTC | 2 | 10 | 207280 | 207289 | 0 % | 20 % | 20 % | 60 % | 528831289 |
137 | NC_021907 | GATCG | 2 | 10 | 207877 | 207886 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
138 | NC_021907 | GGCGC | 2 | 10 | 210019 | 210028 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
139 | NC_021907 | CGCGC | 3 | 15 | 211866 | 211880 | 0 % | 0 % | 40 % | 60 % | 528831292 |
140 | NC_021907 | ATCGC | 2 | 10 | 216496 | 216505 | 20 % | 20 % | 20 % | 40 % | 528831296 |
141 | NC_021907 | GCTTT | 2 | 10 | 216981 | 216990 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
142 | NC_021907 | CAGGA | 2 | 10 | 217035 | 217044 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
143 | NC_021907 | CGGCG | 2 | 10 | 217094 | 217103 | 0 % | 0 % | 60 % | 40 % | 528831297 |
144 | NC_021907 | GGCCG | 2 | 10 | 217160 | 217169 | 0 % | 0 % | 60 % | 40 % | 528831297 |
145 | NC_021907 | CCATG | 2 | 10 | 225963 | 225972 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
146 | NC_021907 | GGCGC | 2 | 10 | 230099 | 230108 | 0 % | 0 % | 60 % | 40 % | 528831312 |
147 | NC_021907 | GCCGC | 2 | 10 | 232174 | 232183 | 0 % | 0 % | 40 % | 60 % | 528831313 |
148 | NC_021907 | GCGTG | 2 | 10 | 233418 | 233427 | 0 % | 20 % | 60 % | 20 % | 528831314 |
149 | NC_021907 | GGCCG | 2 | 10 | 234950 | 234959 | 0 % | 0 % | 60 % | 40 % | 528831315 |
150 | NC_021907 | CATCT | 2 | 10 | 237349 | 237358 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
151 | NC_021907 | GCGCG | 2 | 10 | 238582 | 238591 | 0 % | 0 % | 60 % | 40 % | 528831319 |
152 | NC_021907 | CCCTC | 2 | 10 | 239865 | 239874 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
153 | NC_021907 | AGCGA | 2 | 10 | 241529 | 241538 | 40 % | 0 % | 40 % | 20 % | 528831322 |
154 | NC_021907 | GCCGC | 2 | 10 | 241715 | 241724 | 0 % | 0 % | 40 % | 60 % | 528831322 |
155 | NC_021907 | AATGC | 2 | 10 | 242068 | 242077 | 40 % | 20 % | 20 % | 20 % | 528831322 |
156 | NC_021907 | CTTTG | 2 | 10 | 244578 | 244587 | 0 % | 60 % | 20 % | 20 % | 528831324 |
157 | NC_021907 | TCTGA | 2 | 10 | 245735 | 245744 | 20 % | 40 % | 20 % | 20 % | 528831325 |
158 | NC_021907 | GGAAA | 2 | 10 | 247491 | 247500 | 60 % | 0 % | 40 % | 0 % | 528831327 |
159 | NC_021907 | CAGCT | 2 | 10 | 248264 | 248273 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
160 | NC_021907 | CCCGT | 2 | 10 | 248583 | 248592 | 0 % | 20 % | 20 % | 60 % | 528831328 |
161 | NC_021907 | ATGCG | 2 | 10 | 249271 | 249280 | 20 % | 20 % | 40 % | 20 % | 528831329 |
162 | NC_021907 | GCATG | 2 | 10 | 251660 | 251669 | 20 % | 20 % | 40 % | 20 % | 528831331 |
163 | NC_021907 | CAGGG | 2 | 10 | 251768 | 251777 | 20 % | 0 % | 60 % | 20 % | 528831331 |
164 | NC_021907 | GCGAA | 2 | 10 | 252602 | 252611 | 40 % | 0 % | 40 % | 20 % | 528831331 |