MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Candidatus Carsonella ruddii DC

Total Repeats: 131

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021894	TTA	2	6	9028	9033	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_021894	ATA	2	6	9072	9077	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_021894	TTA	2	6	9089	9094	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_021894	ATA	2	6	9133	9138	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_021894	TTA	2	6	9150	9155	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_021894	ATT	2	6	14096	14101	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_021894	TAA	2	6	37313	37318	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_021894	AGT	2	6	42556	42561	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_021894	ATC	2	6	42589	42594	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_021894	ATT	2	6	42632	42637	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_021894	TAA	3	9	49801	49809	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_021894	TGA	2	6	49843	49848	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_021894	ATT	2	6	49861	49866	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_021894	AAT	2	6	55462	55467	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_021894	TAT	2	6	55505	55510	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_021894	TAA	2	6	55676	55681	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_021894	TAA	2	6	55698	55703	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_021894	TAA	2	6	55743	55748	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_021894	GGT	2	6	63915	63920	0 %	33.33 %	66.67 %	0 %	Non-Coding
20	NC_021894	GCT	2	6	64036	64041	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
21	NC_021894	GAT	2	6	64094	64099	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_021894	TTA	2	6	64169	64174	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_021894	TAT	2	6	64175	64180	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_021894	AAT	2	6	65039	65044	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_021894	ATT	2	6	75674	75679	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_021894	TAA	2	6	79900	79905	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_021894	TGA	2	6	95641	95646	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_021894	TAT	2	6	95663	95668	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_021894	ATT	2	6	95706	95711	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_021894	AAG	2	6	95750	95755	66.67 %	0 %	33.33 %	0 %	Non-Coding
31	NC_021894	TAA	2	6	95817	95822	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_021894	GAG	2	6	95852	95857	33.33 %	0 %	66.67 %	0 %	Non-Coding
33	NC_021894	TAA	2	6	95906	95911	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_021894	TAT	2	6	95915	95920	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_021894	ATT	2	6	95925	95930	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_021894	TAT	3	9	95945	95953	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_021894	TAA	2	6	103786	103791	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_021894	ATA	2	6	103825	103830	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_021894	TAA	2	6	103844	103849	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_021894	TAG	2	6	106949	106954	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_021894	TGT	2	6	107042	107047	0 %	66.67 %	33.33 %	0 %	Non-Coding
42	NC_021894	TAT	2	6	107051	107056	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_021894	TTG	2	6	107069	107074	0 %	66.67 %	33.33 %	0 %	Non-Coding
44	NC_021894	TAT	2	6	109766	109771	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_021894	TTA	2	6	110698	110703	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_021894	AAT	2	6	110704	110709	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_021894	ATA	2	6	112542	112547	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_021894	AAT	2	6	120856	120861	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_021894	ATT	2	6	120922	120927	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_021894	CAT	2	6	120994	120999	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_021894	AAG	2	6	121032	121037	66.67 %	0 %	33.33 %	0 %	Non-Coding
52	NC_021894	CAA	2	6	121040	121045	66.67 %	0 %	0 %	33.33 %	Non-Coding
53	NC_021894	AGT	2	6	121094	121099	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_021894	ACC	2	6	121149	121154	33.33 %	0 %	0 %	66.67 %	Non-Coding
55	NC_021894	ACG	2	6	121243	121248	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
56	NC_021894	TGA	2	6	121323	121328	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
57	NC_021894	CTC	2	6	121557	121562	0 %	33.33 %	0 %	66.67 %	Non-Coding
58	NC_021894	AGG	2	6	121574	121579	33.33 %	0 %	66.67 %	0 %	Non-Coding
59	NC_021894	AAT	2	6	121649	121654	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_021894	CAT	2	6	121855	121860	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_021894	GCC	2	6	121930	121935	0 %	0 %	33.33 %	66.67 %	Non-Coding
62	NC_021894	TTA	2	6	121950	121955	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_021894	TAA	2	6	122057	122062	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_021894	AAT	2	6	122115	122120	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_021894	TCT	2	6	122129	122134	0 %	66.67 %	0 %	33.33 %	Non-Coding
66	NC_021894	ATT	2	6	122242	122247	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_021894	TTG	2	6	122264	122269	0 %	66.67 %	33.33 %	0 %	Non-Coding
68	NC_021894	TAA	2	6	122279	122284	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_021894	ATT	2	6	122325	122330	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_021894	ATC	2	6	122485	122490	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
71	NC_021894	TAA	2	6	122591	122596	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_021894	TCT	2	6	122598	122603	0 %	66.67 %	0 %	33.33 %	Non-Coding
73	NC_021894	CTC	2	6	122619	122624	0 %	33.33 %	0 %	66.67 %	Non-Coding
74	NC_021894	AAT	2	6	122634	122639	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_021894	ATC	2	6	122688	122693	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_021894	GCT	2	6	122730	122735	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
77	NC_021894	ATT	2	6	122763	122768	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_021894	GTT	2	6	122821	122826	0 %	66.67 %	33.33 %	0 %	Non-Coding
79	NC_021894	TAA	2	6	122870	122875	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_021894	GAG	2	6	122977	122982	33.33 %	0 %	66.67 %	0 %	Non-Coding
81	NC_021894	ATC	2	6	123029	123034	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
82	NC_021894	TCC	2	6	123064	123069	0 %	33.33 %	0 %	66.67 %	Non-Coding
83	NC_021894	TAT	2	6	123126	123131	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_021894	CTA	2	6	123170	123175	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_021894	ATA	2	6	123195	123200	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_021894	TAC	2	6	123392	123397	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_021894	ATA	2	6	123414	123419	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_021894	TAT	2	6	123480	123485	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_021894	ACT	2	6	123530	123535	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
90	NC_021894	TAG	2	6	123618	123623	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_021894	TAT	3	9	123767	123775	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_021894	AAT	2	6	123997	124002	66.67 %	33.33 %	0 %	0 %	Non-Coding
93	NC_021894	ATG	2	6	124088	124093	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_021894	CGT	2	6	124100	124105	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
95	NC_021894	TCC	2	6	124114	124119	0 %	33.33 %	0 %	66.67 %	Non-Coding
96	NC_021894	TTA	2	6	124140	124145	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_021894	ATT	2	6	124154	124159	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_021894	GAC	2	6	124225	124230	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
99	NC_021894	GCA	2	6	124237	124242	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
100	NC_021894	TTA	2	6	124263	124268	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_021894	TAA	2	6	124273	124278	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_021894	TAA	2	6	124481	124486	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_021894	TCT	2	6	124648	124653	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_021894	TTA	2	6	124667	124672	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_021894	TTA	2	6	124685	124690	33.33 %	66.67 %	0 %	0 %	Non-Coding
106	NC_021894	TAA	2	6	124699	124704	66.67 %	33.33 %	0 %	0 %	Non-Coding
107	NC_021894	GCT	2	6	124791	124796	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
108	NC_021894	CTT	2	6	124816	124821	0 %	66.67 %	0 %	33.33 %	Non-Coding
109	NC_021894	TTA	2	6	124848	124853	33.33 %	66.67 %	0 %	0 %	Non-Coding
110	NC_021894	TCT	2	6	124864	124869	0 %	66.67 %	0 %	33.33 %	Non-Coding
111	NC_021894	TTG	2	6	124874	124879	0 %	66.67 %	33.33 %	0 %	Non-Coding
112	NC_021894	CTT	2	6	124903	124908	0 %	66.67 %	0 %	33.33 %	Non-Coding
113	NC_021894	CTG	2	6	124962	124967	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
114	NC_021894	GTT	2	6	125008	125013	0 %	66.67 %	33.33 %	0 %	Non-Coding
115	NC_021894	AAC	2	6	125063	125068	66.67 %	0 %	0 %	33.33 %	Non-Coding
116	NC_021894	GCT	2	6	125209	125214	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
117	NC_021894	ATT	2	6	125320	125325	33.33 %	66.67 %	0 %	0 %	Non-Coding
118	NC_021894	AAT	2	6	125337	125342	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_021894	CAA	2	6	131902	131907	66.67 %	0 %	0 %	33.33 %	Non-Coding
120	NC_021894	TCG	2	6	131969	131974	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
121	NC_021894	GAA	2	6	131987	131992	66.67 %	0 %	33.33 %	0 %	Non-Coding
122	NC_021894	ATT	2	6	153088	153093	33.33 %	66.67 %	0 %	0 %	Non-Coding
123	NC_021894	TTA	2	6	162504	162509	33.33 %	66.67 %	0 %	0 %	Non-Coding
124	NC_021894	AAT	2	6	162510	162515	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_021894	ATA	2	6	162645	162650	66.67 %	33.33 %	0 %	0 %	Non-Coding
126	NC_021894	GCA	2	6	162709	162714	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
127	NC_021894	TCT	2	6	162751	162756	0 %	66.67 %	0 %	33.33 %	Non-Coding
128	NC_021894	AAT	2	6	172334	172339	66.67 %	33.33 %	0 %	0 %	Non-Coding
129	NC_021894	TAA	2	6	172369	172374	66.67 %	33.33 %	0 %	0 %	Non-Coding
130	NC_021894	TAA	2	6	172401	172406	66.67 %	33.33 %	0 %	0 %	Non-Coding
131	NC_021894	TAA	2	6	173225	173230	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.