MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02

Total Repeats: 97

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021841	CCA	2	6	57	62	33.33 %	0 %	0 %	66.67 %	Non-Coding
2	NC_021841	CTT	2	6	119	124	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_021841	CCG	2	6	214	219	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_021841	ATA	2	6	296	301	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_021841	CAG	2	6	345	350	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_021841	ATG	2	6	385	390	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_021841	CAA	2	6	397	402	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_021841	CCG	2	6	448	453	0 %	0 %	33.33 %	66.67 %	Non-Coding
9	NC_021841	AAT	2	6	503	508	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_021841	GTA	2	6	596	601	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_021841	CAT	2	6	670	675	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_021841	TAA	2	6	757	762	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_021841	AGA	2	6	969	974	66.67 %	0 %	33.33 %	0 %	Non-Coding
14	NC_021841	GAA	2	6	996	1001	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_021841	AAG	2	6	1031	1036	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_021841	ATC	2	6	1112	1117	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_021841	TTC	2	6	1221	1226	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_021841	TTA	2	6	1266	1271	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_021841	CAT	2	6	1291	1296	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
20	NC_021841	AGT	2	6	1511	1516	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_021841	TCA	2	6	1551	1556	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_021841	GTC	2	6	1667	1672	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
23	NC_021841	GAC	2	6	1784	1789	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_021841	AGG	2	6	3065	3070	33.33 %	0 %	66.67 %	0 %	Non-Coding
25	NC_021841	TAG	2	6	3091	3096	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_021841	ATG	2	6	3113	3118	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_021841	GTT	2	6	3704	3709	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_021841	TCG	2	6	5641	5646	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
29	NC_021841	TGG	2	6	6727	6732	0 %	33.33 %	66.67 %	0 %	Non-Coding
30	NC_021841	AAC	2	6	6733	6738	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_021841	AAT	2	6	7558	7563	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_021841	GCA	2	6	7678	7683	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_021841	GCG	2	6	7707	7712	0 %	0 %	66.67 %	33.33 %	Non-Coding
34	NC_021841	CAG	2	6	7776	7781	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_021841	GCA	2	6	7861	7866	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_021841	GCT	2	6	8979	8984	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_021841	ATA	2	6	9029	9034	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_021841	AAT	2	6	9638	9643	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_021841	GCA	2	6	9758	9763	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_021841	GCG	2	6	9787	9792	0 %	0 %	66.67 %	33.33 %	Non-Coding
41	NC_021841	TGA	2	6	9800	9805	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_021841	CAG	2	6	9856	9861	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
43	NC_021841	GCA	2	6	9941	9946	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NC_021841	ATA	2	6	11137	11142	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_021841	TTA	2	6	11171	11176	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_021841	ATG	2	6	11379	11384	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_021841	TGA	2	6	11608	11613	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_021841	TCA	2	6	11714	11719	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_021841	AAC	3	9	11727	11735	66.67 %	0 %	0 %	33.33 %	Non-Coding
50	NC_021841	CGC	2	6	11771	11776	0 %	0 %	33.33 %	66.67 %	Non-Coding
51	NC_021841	GCA	2	6	11832	11837	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
52	NC_021841	ATA	2	6	11969	11974	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_021841	TGA	2	6	12279	12284	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_021841	TTA	2	6	12386	12391	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_021841	CTT	2	6	12441	12446	0 %	66.67 %	0 %	33.33 %	Non-Coding
56	NC_021841	TGC	2	6	13490	13495	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_021841	GAT	2	6	13545	13550	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_021841	TGC	2	6	14741	14746	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
59	NC_021841	ATA	3	9	14782	14790	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_021841	TGA	2	6	14846	14851	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
61	NC_021841	GTT	2	6	14971	14976	0 %	66.67 %	33.33 %	0 %	Non-Coding
62	NC_021841	GAT	2	6	15098	15103	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_021841	TAT	2	6	15175	15180	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_021841	CAT	2	6	15815	15820	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_021841	CCG	2	6	15887	15892	0 %	0 %	33.33 %	66.67 %	Non-Coding
66	NC_021841	TAT	2	6	15915	15920	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_021841	AAT	2	6	15935	15940	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_021841	TCC	2	6	16613	16618	0 %	33.33 %	0 %	66.67 %	Non-Coding
69	NC_021841	TGT	2	6	17781	17786	0 %	66.67 %	33.33 %	0 %	Non-Coding
70	NC_021841	TAA	2	6	17790	17795	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_021841	ATC	2	6	17854	17859	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
72	NC_021841	GAA	2	6	17864	17869	66.67 %	0 %	33.33 %	0 %	Non-Coding
73	NC_021841	CAG	2	6	18488	18493	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_021841	ACC	2	6	18634	18639	33.33 %	0 %	0 %	66.67 %	Non-Coding
75	NC_021841	GAA	2	6	18730	18735	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_021841	TAT	2	6	18769	18774	33.33 %	66.67 %	0 %	0 %	Non-Coding
77	NC_021841	TGT	2	6	19742	19747	0 %	66.67 %	33.33 %	0 %	Non-Coding
78	NC_021841	GTT	2	6	19763	19768	0 %	66.67 %	33.33 %	0 %	Non-Coding
79	NC_021841	CGG	2	6	19814	19819	0 %	0 %	66.67 %	33.33 %	Non-Coding
80	NC_021841	ATT	2	6	20647	20652	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_021841	ACC	2	6	24076	24081	33.33 %	0 %	0 %	66.67 %	Non-Coding
82	NC_021841	TAT	2	6	24152	24157	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_021841	GTT	2	6	25435	25440	0 %	66.67 %	33.33 %	0 %	Non-Coding
84	NC_021841	GCG	2	6	25476	25481	0 %	0 %	66.67 %	33.33 %	Non-Coding
85	NC_021841	GCT	2	6	31316	31321	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_021841	TCA	2	6	34427	34432	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_021841	CCA	2	6	34508	34513	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_021841	TTC	2	6	34633	34638	0 %	66.67 %	0 %	33.33 %	Non-Coding
89	NC_021841	TGC	2	6	34707	34712	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
90	NC_021841	TTC	2	6	34742	34747	0 %	66.67 %	0 %	33.33 %	Non-Coding
91	NC_021841	CAG	2	6	34918	34923	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
92	NC_021841	ATC	2	6	34954	34959	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
93	NC_021841	ATT	2	6	34987	34992	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_021841	ATC	2	6	35104	35109	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
95	NC_021841	AGG	2	6	35164	35169	33.33 %	0 %	66.67 %	0 %	Non-Coding
96	NC_021841	TAA	2	6	35199	35204	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_021841	TTG	2	6	35289	35294	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.