MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum 16 plasmid Lp16I

Total Repeats: 63

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021528	TCA	2	6	1743	1748	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_021528	ATT	2	6	1758	1763	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_021528	ACG	2	6	2045	2050	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_021528	GTA	2	6	2068	2073	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_021528	TTG	2	6	2126	2131	0 %	66.67 %	33.33 %	0 %	Non-Coding
6	NC_021528	GTA	2	6	2363	2368	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_021528	TTG	2	6	2387	2392	0 %	66.67 %	33.33 %	0 %	Non-Coding
8	NC_021528	ACA	2	6	2711	2716	66.67 %	0 %	0 %	33.33 %	Non-Coding
9	NC_021528	CAA	2	6	2808	2813	66.67 %	0 %	0 %	33.33 %	Non-Coding
10	NC_021528	TGT	2	6	2831	2836	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_021528	TTA	2	6	2837	2842	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_021528	CAA	2	6	2850	2855	66.67 %	0 %	0 %	33.33 %	Non-Coding
13	NC_021528	AAC	2	6	2899	2904	66.67 %	0 %	0 %	33.33 %	Non-Coding
14	NC_021528	TAT	2	6	2926	2931	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_021528	TAA	2	6	2974	2979	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_021528	GAA	2	6	3045	3050	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_021528	TAC	2	6	3132	3137	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_021528	TTA	2	6	3148	3153	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_021528	GTA	2	6	3177	3182	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_021528	AGA	2	6	3335	3340	66.67 %	0 %	33.33 %	0 %	Non-Coding
21	NC_021528	ACA	2	6	3437	3442	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_021528	AAC	2	6	3460	3465	66.67 %	0 %	0 %	33.33 %	Non-Coding
23	NC_021528	TAG	2	6	4857	4862	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_021528	ATT	2	6	5397	5402	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_021528	TGG	2	6	6083	6088	0 %	33.33 %	66.67 %	0 %	Non-Coding
26	NC_021528	TCA	2	6	6183	6188	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_021528	ACT	2	6	6302	6307	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_021528	GTA	2	6	6323	6328	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_021528	CAC	2	6	6334	6339	33.33 %	0 %	0 %	66.67 %	Non-Coding
30	NC_021528	AAC	2	6	6392	6397	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_021528	GAA	3	9	6558	6566	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_021528	TGT	2	6	6574	6579	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_021528	GTT	2	6	6703	6708	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_021528	GCC	2	6	6776	6781	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_021528	GCG	2	6	6835	6840	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_021528	TAG	2	6	7008	7013	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_021528	ACT	2	6	7120	7125	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_021528	ATG	2	6	7841	7846	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_021528	ATC	2	6	7876	7881	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_021528	CTT	2	6	7905	7910	0 %	66.67 %	0 %	33.33 %	Non-Coding
41	NC_021528	GGC	2	6	7944	7949	0 %	0 %	66.67 %	33.33 %	Non-Coding
42	NC_021528	GCT	2	6	7966	7971	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_021528	TAA	2	6	8054	8059	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_021528	TAG	2	6	8174	8179	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
45	NC_021528	AAC	2	6	8218	8223	66.67 %	0 %	0 %	33.33 %	Non-Coding
46	NC_021528	AAT	2	6	8349	8354	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_021528	AAG	2	6	8385	8390	66.67 %	0 %	33.33 %	0 %	Non-Coding
48	NC_021528	ATT	2	6	8393	8398	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_021528	ATC	2	6	10106	10111	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
50	NC_021528	TTA	2	6	10886	10891	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_021528	CTT	2	6	10915	10920	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_021528	ATG	2	6	11021	11026	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_021528	TGG	2	6	11107	11112	0 %	33.33 %	66.67 %	0 %	Non-Coding
54	NC_021528	ATA	2	6	11247	11252	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_021528	TGC	3	9	11290	11298	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_021528	ACA	2	6	11310	11315	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_021528	CAA	2	6	12495	12500	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_021528	CTA	2	6	12681	12686	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
59	NC_021528	ATG	2	6	12830	12835	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_021528	TTA	2	6	12911	12916	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_021528	GAC	2	6	12970	12975	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_021528	GTA	2	6	13140	13145	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_021528	ACG	3	9	13223	13231	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.