MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum 16 plasmid Lp16G

Total Repeats: 106

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021527	ACG	2	6	325	330	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_021527	TGG	2	6	495	500	0 %	33.33 %	66.67 %	0 %	Non-Coding
3	NC_021527	AGC	2	6	4446	4451	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_021527	ACC	2	6	4589	4594	33.33 %	0 %	0 %	66.67 %	Non-Coding
5	NC_021527	AAT	2	6	4646	4651	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_021527	ATT	2	6	4692	4697	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_021527	GAA	2	6	4712	4717	66.67 %	0 %	33.33 %	0 %	Non-Coding
8	NC_021527	ATT	2	6	4718	4723	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_021527	GAA	2	6	5814	5819	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_021527	TAA	2	6	5820	5825	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_021527	GCT	2	6	5831	5836	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_021527	ATT	2	6	5870	5875	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_021527	CTA	2	6	5916	5921	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_021527	CTC	2	6	7198	7203	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_021527	CAG	2	6	7236	7241	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_021527	AAT	2	6	7469	7474	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_021527	ACT	2	6	7556	7561	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_021527	AGT	2	6	7565	7570	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_021527	GGC	2	6	7686	7691	0 %	0 %	66.67 %	33.33 %	Non-Coding
20	NC_021527	TGA	2	6	7883	7888	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_021527	ATG	2	6	7998	8003	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_021527	GTT	2	6	9692	9697	0 %	66.67 %	33.33 %	0 %	Non-Coding
23	NC_021527	TTA	2	6	9701	9706	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_021527	GTC	2	6	9707	9712	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_021527	CTC	2	6	9741	9746	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_021527	AGT	2	6	9835	9840	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_021527	TGA	2	6	9853	9858	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_021527	AGT	2	6	9861	9866	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_021527	TAT	2	6	12564	12569	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_021527	AGG	2	6	13818	13823	33.33 %	0 %	66.67 %	0 %	Non-Coding
31	NC_021527	TGG	3	9	15955	15963	0 %	33.33 %	66.67 %	0 %	Non-Coding
32	NC_021527	GGT	2	6	15979	15984	0 %	33.33 %	66.67 %	0 %	Non-Coding
33	NC_021527	TGG	2	6	17894	17899	0 %	33.33 %	66.67 %	0 %	Non-Coding
34	NC_021527	TAA	2	6	17999	18004	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_021527	TTA	2	6	18125	18130	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_021527	AAG	2	6	18131	18136	66.67 %	0 %	33.33 %	0 %	Non-Coding
37	NC_021527	AAG	2	6	18310	18315	66.67 %	0 %	33.33 %	0 %	Non-Coding
38	NC_021527	TAC	2	6	18353	18358	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_021527	CAG	2	6	18366	18371	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_021527	AGG	2	6	18402	18407	33.33 %	0 %	66.67 %	0 %	Non-Coding
41	NC_021527	CGT	2	6	18444	18449	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_021527	TAG	2	6	18529	18534	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_021527	AAC	2	6	18546	18551	66.67 %	0 %	0 %	33.33 %	Non-Coding
44	NC_021527	GTT	2	6	18562	18567	0 %	66.67 %	33.33 %	0 %	Non-Coding
45	NC_021527	AGG	2	6	18604	18609	33.33 %	0 %	66.67 %	0 %	Non-Coding
46	NC_021527	GGT	2	6	21678	21683	0 %	33.33 %	66.67 %	0 %	Non-Coding
47	NC_021527	TGG	2	6	21688	21693	0 %	33.33 %	66.67 %	0 %	Non-Coding
48	NC_021527	TGG	2	6	21721	21726	0 %	33.33 %	66.67 %	0 %	Non-Coding
49	NC_021527	CTT	2	6	21836	21841	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_021527	ATT	2	6	21919	21924	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_021527	GAG	2	6	21928	21933	33.33 %	0 %	66.67 %	0 %	Non-Coding
52	NC_021527	GTT	2	6	21934	21939	0 %	66.67 %	33.33 %	0 %	Non-Coding
53	NC_021527	AGA	2	6	27673	27678	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_021527	TAA	2	6	28352	28357	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_021527	TAT	2	6	28432	28437	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_021527	TGT	2	6	28588	28593	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_021527	ATT	2	6	28884	28889	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_021527	AAT	2	6	28897	28902	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_021527	CAT	2	6	28947	28952	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_021527	AGT	2	6	31282	31287	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
61	NC_021527	AGG	2	6	31306	31311	33.33 %	0 %	66.67 %	0 %	Non-Coding
62	NC_021527	AGG	2	6	34952	34957	33.33 %	0 %	66.67 %	0 %	Non-Coding
63	NC_021527	TAC	2	6	35327	35332	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_021527	AAC	2	6	35369	35374	66.67 %	0 %	0 %	33.33 %	Non-Coding
65	NC_021527	GAG	2	6	38268	38273	33.33 %	0 %	66.67 %	0 %	Non-Coding
66	NC_021527	TGG	2	6	38274	38279	0 %	33.33 %	66.67 %	0 %	Non-Coding
67	NC_021527	AGT	2	6	41194	41199	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_021527	TCA	2	6	41218	41223	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_021527	TGG	2	6	41244	41249	0 %	33.33 %	66.67 %	0 %	Non-Coding
70	NC_021527	AAT	2	6	41259	41264	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_021527	AGG	2	6	41325	41330	33.33 %	0 %	66.67 %	0 %	Non-Coding
72	NC_021527	TTC	2	6	41656	41661	0 %	66.67 %	0 %	33.33 %	Non-Coding
73	NC_021527	CAA	2	6	41721	41726	66.67 %	0 %	0 %	33.33 %	Non-Coding
74	NC_021527	ATA	2	6	41811	41816	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_021527	CTA	2	6	42816	42821	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_021527	TCA	2	6	42908	42913	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_021527	AAT	2	6	43664	43669	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_021527	TGG	2	6	43730	43735	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_021527	ATT	2	6	43737	43742	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_021527	ATT	2	6	43808	43813	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_021527	ATA	2	6	43908	43913	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_021527	TAA	2	6	44004	44009	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_021527	TAT	2	6	44070	44075	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_021527	ATA	2	6	44094	44099	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_021527	ATT	2	6	46237	46242	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_021527	TAG	2	6	46933	46938	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
87	NC_021527	AAT	2	6	46952	46957	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_021527	GAA	2	6	46967	46972	66.67 %	0 %	33.33 %	0 %	Non-Coding
89	NC_021527	GAA	2	6	46982	46987	66.67 %	0 %	33.33 %	0 %	Non-Coding
90	NC_021527	ATA	2	6	46994	46999	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_021527	ATC	2	6	47007	47012	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
92	NC_021527	GAA	2	6	47089	47094	66.67 %	0 %	33.33 %	0 %	Non-Coding
93	NC_021527	ATG	2	6	47206	47211	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_021527	TAT	2	6	47265	47270	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_021527	AAC	2	6	47278	47283	66.67 %	0 %	0 %	33.33 %	Non-Coding
96	NC_021527	ATA	3	9	47285	47293	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_021527	GAC	2	6	47366	47371	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
98	NC_021527	TCT	2	6	47707	47712	0 %	66.67 %	0 %	33.33 %	Non-Coding
99	NC_021527	ATA	2	6	47740	47745	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_021527	CCT	2	6	47780	47785	0 %	33.33 %	0 %	66.67 %	Non-Coding
101	NC_021527	GTA	2	6	47791	47796	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
102	NC_021527	TTA	2	6	48282	48287	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_021527	TAT	2	6	50092	50097	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_021527	GTC	2	6	50193	50198	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
105	NC_021527	ATA	2	6	51447	51452	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_021527	AGG	2	6	51733	51738	33.33 %	0 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.