MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum 16 plasmid Lp16H

Total Repeats: 114

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021519	TGT	2	6	1343	1348	0 %	66.67 %	33.33 %	0 %	Non-Coding
2	NC_021519	TCT	2	6	1354	1359	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_021519	GTA	2	6	1368	1373	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_021519	AGG	2	6	1416	1421	33.33 %	0 %	66.67 %	0 %	Non-Coding
5	NC_021519	AGG	3	9	3938	3946	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_021519	TAA	3	9	5572	5580	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_021519	GAT	2	6	5803	5808	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_021519	ATA	2	6	5813	5818	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_021519	CTT	2	6	5934	5939	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_021519	TGA	2	6	5978	5983	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_021519	TTA	2	6	10283	10288	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_021519	TAT	2	6	10294	10299	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_021519	ATA	2	6	12485	12490	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_021519	AAT	2	6	13157	13162	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_021519	GTG	2	6	13245	13250	0 %	33.33 %	66.67 %	0 %	Non-Coding
16	NC_021519	ATA	2	6	13258	13263	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_021519	CAA	2	6	13268	13273	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_021519	CAA	2	6	13291	13296	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_021519	GAA	2	6	13312	13317	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_021519	ACC	2	6	13345	13350	33.33 %	0 %	0 %	66.67 %	Non-Coding
21	NC_021519	GCT	2	6	13429	13434	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_021519	CAC	2	6	13807	13812	33.33 %	0 %	0 %	66.67 %	Non-Coding
23	NC_021519	ATG	2	6	13843	13848	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_021519	TAA	2	6	15005	15010	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_021519	ACA	2	6	16303	16308	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_021519	TAA	2	6	16385	16390	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_021519	AGT	2	6	16406	16411	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_021519	GTT	2	6	16451	16456	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_021519	AGG	2	6	16550	16555	33.33 %	0 %	66.67 %	0 %	Non-Coding
30	NC_021519	AGG	2	6	20601	20606	33.33 %	0 %	66.67 %	0 %	Non-Coding
31	NC_021519	CTT	2	6	22375	22380	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_021519	ATC	2	6	22876	22881	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_021519	ACC	2	6	22891	22896	33.33 %	0 %	0 %	66.67 %	Non-Coding
34	NC_021519	AAG	2	6	22921	22926	66.67 %	0 %	33.33 %	0 %	Non-Coding
35	NC_021519	CAA	2	6	22957	22962	66.67 %	0 %	0 %	33.33 %	Non-Coding
36	NC_021519	TTA	2	6	23133	23138	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_021519	CAA	2	6	23148	23153	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_021519	ATA	2	6	23879	23884	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_021519	CCT	2	6	25079	25084	0 %	33.33 %	0 %	66.67 %	Non-Coding
40	NC_021519	GAT	2	6	25599	25604	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_021519	AAT	2	6	25666	25671	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_021519	ATT	2	6	25683	25688	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_021519	CAA	2	6	28211	28216	66.67 %	0 %	0 %	33.33 %	Non-Coding
44	NC_021519	ATA	2	6	28230	28235	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_021519	GAT	2	6	28268	28273	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46	NC_021519	AGA	2	6	28426	28431	66.67 %	0 %	33.33 %	0 %	Non-Coding
47	NC_021519	AGG	2	6	28823	28828	33.33 %	0 %	66.67 %	0 %	Non-Coding
48	NC_021519	TTC	3	9	29125	29133	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_021519	CTA	2	6	29239	29244	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
50	NC_021519	CCA	2	6	29266	29271	33.33 %	0 %	0 %	66.67 %	Non-Coding
51	NC_021519	TCT	2	6	32057	32062	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_021519	TTG	2	6	32065	32070	0 %	66.67 %	33.33 %	0 %	Non-Coding
53	NC_021519	GTT	2	6	32083	32088	0 %	66.67 %	33.33 %	0 %	Non-Coding
54	NC_021519	GTT	2	6	32097	32102	0 %	66.67 %	33.33 %	0 %	Non-Coding
55	NC_021519	ACC	2	6	34601	34606	33.33 %	0 %	0 %	66.67 %	Non-Coding
56	NC_021519	TGG	2	6	34627	34632	0 %	33.33 %	66.67 %	0 %	Non-Coding
57	NC_021519	AAT	2	6	36656	36661	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_021519	ATA	2	6	36699	36704	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_021519	ATA	2	6	36711	36716	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_021519	ATA	2	6	38341	38346	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_021519	AGC	2	6	38419	38424	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_021519	ACT	2	6	38599	38604	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_021519	AGT	2	6	38608	38613	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_021519	GAA	2	6	38872	38877	66.67 %	0 %	33.33 %	0 %	Non-Coding
65	NC_021519	TGA	2	6	38924	38929	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_021519	GTG	2	6	39078	39083	0 %	33.33 %	66.67 %	0 %	Non-Coding
67	NC_021519	GTT	2	6	40729	40734	0 %	66.67 %	33.33 %	0 %	Non-Coding
68	NC_021519	TTA	2	6	40738	40743	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_021519	CTC	2	6	40778	40783	0 %	33.33 %	0 %	66.67 %	Non-Coding
70	NC_021519	AGT	2	6	40872	40877	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_021519	TGA	2	6	40890	40895	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
72	NC_021519	AGT	2	6	40898	40903	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_021519	TAT	2	6	43544	43549	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_021519	TGG	2	6	43580	43585	0 %	33.33 %	66.67 %	0 %	Non-Coding
75	NC_021519	GTC	2	6	43708	43713	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_021519	GTA	2	6	43717	43722	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_021519	GGA	2	6	44799	44804	33.33 %	0 %	66.67 %	0 %	Non-Coding
78	NC_021519	TGG	2	6	48873	48878	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_021519	TAA	2	6	48978	48983	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_021519	TTA	2	6	49104	49109	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_021519	AAG	2	6	49110	49115	66.67 %	0 %	33.33 %	0 %	Non-Coding
82	NC_021519	AAG	2	6	49289	49294	66.67 %	0 %	33.33 %	0 %	Non-Coding
83	NC_021519	TAC	2	6	49332	49337	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_021519	CAG	2	6	49345	49350	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
85	NC_021519	TAG	2	6	49508	49513	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
86	NC_021519	AAC	2	6	49525	49530	66.67 %	0 %	0 %	33.33 %	Non-Coding
87	NC_021519	GTT	2	6	49541	49546	0 %	66.67 %	33.33 %	0 %	Non-Coding
88	NC_021519	AGG	2	6	49583	49588	33.33 %	0 %	66.67 %	0 %	Non-Coding
89	NC_021519	TTG	2	6	51689	51694	0 %	66.67 %	33.33 %	0 %	Non-Coding
90	NC_021519	GGT	2	6	52654	52659	0 %	33.33 %	66.67 %	0 %	Non-Coding
91	NC_021519	TGG	2	6	52664	52669	0 %	33.33 %	66.67 %	0 %	Non-Coding
92	NC_021519	TGG	2	6	52686	52691	0 %	33.33 %	66.67 %	0 %	Non-Coding
93	NC_021519	TGG	2	6	52697	52702	0 %	33.33 %	66.67 %	0 %	Non-Coding
94	NC_021519	CTT	2	6	52812	52817	0 %	66.67 %	0 %	33.33 %	Non-Coding
95	NC_021519	GAG	2	6	52904	52909	33.33 %	0 %	66.67 %	0 %	Non-Coding
96	NC_021519	GTA	2	6	57564	57569	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
97	NC_021519	TAG	2	6	57605	57610	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
98	NC_021519	GGT	2	6	57645	57650	0 %	33.33 %	66.67 %	0 %	Non-Coding
99	NC_021519	TAA	2	6	57667	57672	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_021519	TTG	2	6	57776	57781	0 %	66.67 %	33.33 %	0 %	Non-Coding
101	NC_021519	AGA	2	6	58639	58644	66.67 %	0 %	33.33 %	0 %	Non-Coding
102	NC_021519	ATA	2	6	62088	62093	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_021519	AGG	2	6	62099	62104	33.33 %	0 %	66.67 %	0 %	Non-Coding
104	NC_021519	AGT	2	6	62217	62222	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
105	NC_021519	AGG	2	6	62241	62246	33.33 %	0 %	66.67 %	0 %	Non-Coding
106	NC_021519	AGG	2	6	65869	65874	33.33 %	0 %	66.67 %	0 %	Non-Coding
107	NC_021519	TAC	2	6	66242	66247	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
108	NC_021519	AAC	2	6	66284	66289	66.67 %	0 %	0 %	33.33 %	Non-Coding
109	NC_021519	GAG	2	6	69207	69212	33.33 %	0 %	66.67 %	0 %	Non-Coding
110	NC_021519	TGG	2	6	69213	69218	0 %	33.33 %	66.67 %	0 %	Non-Coding
111	NC_021519	AGG	2	6	72274	72279	33.33 %	0 %	66.67 %	0 %	Non-Coding
112	NC_021519	TGA	2	6	72665	72670	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
113	NC_021519	TAA	2	6	72840	72845	66.67 %	33.33 %	0 %	0 %	Non-Coding
114	NC_021519	TGG	2	6	73726	73731	0 %	33.33 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.