MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum 16 plasmid Lp16E

Total Repeats: 97

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021517	AAC	2	6	1010	1015	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_021517	ATT	2	6	1240	1245	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_021517	ATA	2	6	1248	1253	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_021517	GCT	2	6	1254	1259	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_021517	AAG	2	6	1265	1270	66.67 %	0 %	33.33 %	0 %	Non-Coding
6	NC_021517	CTT	2	6	1303	1308	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_021517	ACC	2	6	1459	1464	33.33 %	0 %	0 %	66.67 %	Non-Coding
8	NC_021517	AAT	2	6	1513	1518	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_021517	CCT	2	6	2146	2151	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_021517	ACC	2	6	2225	2230	33.33 %	0 %	0 %	66.67 %	Non-Coding
11	NC_021517	AGC	2	6	2426	2431	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_021517	TAA	2	6	2533	2538	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_021517	TTA	2	6	2588	2593	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_021517	GAG	2	6	2633	2638	33.33 %	0 %	66.67 %	0 %	Non-Coding
15	NC_021517	AGG	2	6	3497	3502	33.33 %	0 %	66.67 %	0 %	Non-Coding
16	NC_021517	GTT	2	6	3768	3773	0 %	66.67 %	33.33 %	0 %	Non-Coding
17	NC_021517	AAC	2	6	4194	4199	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_021517	GTT	2	6	4457	4462	0 %	66.67 %	33.33 %	0 %	Non-Coding
19	NC_021517	ATA	2	6	6589	6594	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_021517	AAT	2	6	6645	6650	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_021517	AAT	2	6	6729	6734	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_021517	TCC	2	6	7306	7311	0 %	33.33 %	0 %	66.67 %	Non-Coding
23	NC_021517	ATC	2	6	7313	7318	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_021517	AAT	2	6	7323	7328	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_021517	CAG	2	6	7423	7428	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
26	NC_021517	TGT	2	6	7477	7482	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_021517	ACA	2	6	7523	7528	66.67 %	0 %	0 %	33.33 %	Non-Coding
28	NC_021517	ATA	2	6	9685	9690	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_021517	AAT	2	6	10624	10629	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_021517	TCC	2	6	10661	10666	0 %	33.33 %	0 %	66.67 %	Non-Coding
31	NC_021517	GCG	2	6	10717	10722	0 %	0 %	66.67 %	33.33 %	Non-Coding
32	NC_021517	TTG	2	6	10807	10812	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_021517	CAA	2	6	10891	10896	66.67 %	0 %	0 %	33.33 %	Non-Coding
34	NC_021517	GCG	2	6	10989	10994	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_021517	TAT	2	6	11021	11026	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_021517	CGG	3	9	11068	11076	0 %	0 %	66.67 %	33.33 %	Non-Coding
37	NC_021517	GTC	2	6	11117	11122	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_021517	GGT	2	6	15806	15811	0 %	33.33 %	66.67 %	0 %	Non-Coding
39	NC_021517	GAC	2	6	15865	15870	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_021517	TGA	2	6	15906	15911	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_021517	CGC	3	9	15943	15951	0 %	0 %	33.33 %	66.67 %	Non-Coding
42	NC_021517	ACC	2	6	15956	15961	33.33 %	0 %	0 %	66.67 %	Non-Coding
43	NC_021517	TGG	2	6	15968	15973	0 %	33.33 %	66.67 %	0 %	Non-Coding
44	NC_021517	AGG	2	6	17697	17702	33.33 %	0 %	66.67 %	0 %	Non-Coding
45	NC_021517	ATT	2	6	19034	19039	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_021517	TAA	2	6	19064	19069	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_021517	TTA	2	6	19114	19119	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_021517	TTG	2	6	19163	19168	0 %	66.67 %	33.33 %	0 %	Non-Coding
49	NC_021517	GTG	2	6	19199	19204	0 %	33.33 %	66.67 %	0 %	Non-Coding
50	NC_021517	TAA	2	6	19257	19262	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_021517	AAT	2	6	19706	19711	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_021517	ATT	2	6	19783	19788	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_021517	CCA	2	6	19845	19850	33.33 %	0 %	0 %	66.67 %	Non-Coding
54	NC_021517	AGT	2	6	19892	19897	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_021517	GAT	2	6	23692	23697	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_021517	CTT	2	6	23699	23704	0 %	66.67 %	0 %	33.33 %	Non-Coding
57	NC_021517	TAA	2	6	23708	23713	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_021517	TAA	2	6	23903	23908	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_021517	GCT	2	6	24649	24654	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
60	NC_021517	GTT	2	6	24682	24687	0 %	66.67 %	33.33 %	0 %	Non-Coding
61	NC_021517	TGG	2	6	24789	24794	0 %	33.33 %	66.67 %	0 %	Non-Coding
62	NC_021517	TCA	2	6	25194	25199	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_021517	TCA	2	6	25354	25359	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_021517	TAA	2	6	25429	25434	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_021517	AAC	2	6	25669	25674	66.67 %	0 %	0 %	33.33 %	Non-Coding
66	NC_021517	ATA	2	6	26644	26649	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_021517	GTT	2	6	28451	28456	0 %	66.67 %	33.33 %	0 %	Non-Coding
68	NC_021517	TTG	2	6	28465	28470	0 %	66.67 %	33.33 %	0 %	Non-Coding
69	NC_021517	TAT	2	6	31696	31701	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_021517	TGA	2	6	31734	31739	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_021517	ACT	2	6	31831	31836	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
72	NC_021517	TTA	2	6	31952	31957	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_021517	AGC	2	6	31976	31981	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_021517	CAT	2	6	32053	32058	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
75	NC_021517	CAA	2	6	32885	32890	66.67 %	0 %	0 %	33.33 %	Non-Coding
76	NC_021517	ACG	2	6	32976	32981	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
77	NC_021517	ATT	2	6	33097	33102	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_021517	CCA	2	6	33132	33137	33.33 %	0 %	0 %	66.67 %	Non-Coding
79	NC_021517	ATC	2	6	33148	33153	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_021517	GAT	2	6	33303	33308	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
81	NC_021517	ACA	2	6	35992	35997	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_021517	ATA	2	6	38681	38686	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_021517	ATA	2	6	38895	38900	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_021517	AAT	2	6	39004	39009	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_021517	ACG	2	6	39391	39396	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
86	NC_021517	TTA	2	6	39409	39414	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_021517	TGT	2	6	39464	39469	0 %	66.67 %	33.33 %	0 %	Non-Coding
88	NC_021517	TAC	2	6	39504	39509	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
89	NC_021517	TAT	2	6	39615	39620	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_021517	ATG	2	6	39628	39633	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_021517	AGG	2	6	39736	39741	33.33 %	0 %	66.67 %	0 %	Non-Coding
92	NC_021517	CAC	2	6	39819	39824	33.33 %	0 %	0 %	66.67 %	Non-Coding
93	NC_021517	GCT	2	6	39845	39850	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
94	NC_021517	TAA	2	6	39914	39919	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_021517	AAC	2	6	40052	40057	66.67 %	0 %	0 %	33.33 %	Non-Coding
96	NC_021517	CTG	2	6	40090	40095	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
97	NC_021517	ACT	2	6	40132	40137	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.