Hexa-nucleotide Non-Coding Repeats of Treponema pallidum subsp. pallidum str. Nichols
Total Repeats: 36
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_021490 | ATTGAA | 2 | 12 | 8548 | 8559 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
2 | NC_021490 | TTTCCG | 2 | 12 | 34170 | 34181 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
3 | NC_021490 | CCTCCC | 2 | 12 | 49438 | 49449 | 0 % | 16.67 % | 0 % | 83.33 % | Non-Coding |
4 | NC_021490 | GCACGA | 2 | 12 | 59448 | 59459 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
5 | NC_021490 | CGCTTG | 2 | 12 | 92931 | 92942 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
6 | NC_021490 | TCTCAA | 2 | 12 | 125131 | 125142 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
7 | NC_021490 | GGCTGG | 4 | 24 | 150541 | 150564 | 0 % | 16.67 % | 66.67 % | 16.67 % | Non-Coding |
8 | NC_021490 | CTGCGG | 4 | 24 | 151754 | 151777 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
9 | NC_021490 | CGGCTC | 2 | 12 | 152259 | 152270 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
10 | NC_021490 | TAAAAA | 2 | 12 | 154172 | 154183 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
11 | NC_021490 | GTGCGA | 2 | 12 | 234679 | 234690 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
12 | NC_021490 | TCCTTC | 2 | 12 | 236060 | 236071 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
13 | NC_021490 | GTTTGT | 2 | 12 | 259109 | 259120 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
14 | NC_021490 | GTGCGA | 2 | 12 | 283124 | 283135 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
15 | NC_021490 | TCCTTC | 2 | 12 | 284505 | 284516 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
16 | NC_021490 | GCACCG | 2 | 12 | 331626 | 331637 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
17 | NC_021490 | CCGGAG | 2 | 12 | 333000 | 333011 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
18 | NC_021490 | CAGCTG | 2 | 12 | 333224 | 333235 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
19 | NC_021490 | AATATA | 2 | 12 | 355129 | 355140 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
20 | NC_021490 | TTTCCG | 2 | 12 | 372392 | 372403 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
21 | NC_021490 | GCACCG | 2 | 12 | 521747 | 521758 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
22 | NC_021490 | CGTGCG | 2 | 12 | 525395 | 525406 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
23 | NC_021490 | TAACCC | 2 | 12 | 562302 | 562313 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
24 | NC_021490 | ATACTG | 2 | 12 | 562396 | 562407 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
25 | NC_021490 | TTCTCC | 2 | 12 | 699191 | 699202 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
26 | NC_021490 | CCTCCG | 2 | 12 | 716760 | 716771 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
27 | NC_021490 | ACGCGC | 2 | 12 | 766695 | 766706 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
28 | NC_021490 | ACGCAG | 2 | 12 | 810601 | 810612 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
29 | NC_021490 | ACACGC | 2 | 12 | 819436 | 819447 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
30 | NC_021490 | GCAGGG | 2 | 12 | 827888 | 827899 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
31 | NC_021490 | CAGAGA | 2 | 12 | 853633 | 853644 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
32 | NC_021490 | GTGCAC | 2 | 12 | 869914 | 869925 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
33 | NC_021490 | AAAGAC | 2 | 12 | 882473 | 882484 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
34 | NC_021490 | CCATCC | 2 | 12 | 890422 | 890433 | 16.67 % | 16.67 % | 0 % | 66.67 % | Non-Coding |
35 | NC_021490 | GGCGCA | 2 | 12 | 907718 | 907729 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
36 | NC_021490 | GAGCAG | 2 | 12 | 995525 | 995536 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |