MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Burkholderia sp. RPE64 plasmid p1 DNA

Total Repeats: 36

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021289	CCGCGC	2	12	9457	9468	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_021289	TACGAG	2	12	10386	10397	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
3	NC_021289	GATGCG	2	12	12221	12232	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
4	NC_021289	CAGGAC	2	12	42253	42264	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_021289	GAACCC	2	12	54788	54799	33.33 %	0 %	16.67 %	50 %	Non-Coding
6	NC_021289	GCCGCA	3	18	79368	79385	16.67 %	0 %	33.33 %	50 %	Non-Coding
7	NC_021289	GCCGGA	2	12	99729	99740	16.67 %	0 %	50 %	33.33 %	Non-Coding
8	NC_021289	TCATCG	2	12	208978	208989	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
9	NC_021289	GCATGC	2	12	220850	220861	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
10	NC_021289	GAAGGA	2	12	243952	243963	50 %	0 %	50 %	0 %	Non-Coding
11	NC_021289	AGGATC	2	12	255113	255124	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
12	NC_021289	CGTGGG	2	12	256641	256652	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
13	NC_021289	GATGTC	2	12	269261	269272	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
14	NC_021289	CATCGA	2	12	273925	273936	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
15	NC_021289	GCGCGG	2	12	316112	316123	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_021289	CCCGTG	2	12	319693	319704	0 %	16.67 %	33.33 %	50 %	Non-Coding
17	NC_021289	CCTCCG	2	12	319735	319746	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
18	NC_021289	GCGCCG	2	12	393213	393224	0 %	0 %	50 %	50 %	Non-Coding
19	NC_021289	CGTGCG	2	12	400707	400718	0 %	16.67 %	50 %	33.33 %	Non-Coding
20	NC_021289	TCGATG	2	12	521826	521837	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
21	NC_021289	ATAAAA	2	12	540167	540178	83.33 %	16.67 %	0 %	0 %	Non-Coding
22	NC_021289	AACATG	2	12	542100	542111	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
23	NC_021289	GCCCCG	2	12	583734	583745	0 %	0 %	33.33 %	66.67 %	Non-Coding
24	NC_021289	ATGCCG	2	12	692477	692488	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
25	NC_021289	CCTTTG	2	12	741295	741306	0 %	50 %	16.67 %	33.33 %	Non-Coding
26	NC_021289	TTACCG	2	12	804374	804385	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
27	NC_021289	CGGAAG	2	12	824362	824373	33.33 %	0 %	50 %	16.67 %	Non-Coding
28	NC_021289	CACGTC	2	12	932185	932196	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
29	NC_021289	CGTTTG	2	12	1067676	1067687	0 %	50 %	33.33 %	16.67 %	Non-Coding
30	NC_021289	TCGCGC	2	12	1085244	1085255	0 %	16.67 %	33.33 %	50 %	Non-Coding
31	NC_021289	CAAACG	2	12	1104742	1104753	50 %	0 %	16.67 %	33.33 %	Non-Coding
32	NC_021289	AATAAC	2	12	1152286	1152297	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
33	NC_021289	GTCACT	2	12	1197274	1197285	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
34	NC_021289	CGAACA	2	12	1201502	1201513	50 %	0 %	16.67 %	33.33 %	Non-Coding
35	NC_021289	ATCGAC	2	12	1241875	1241886	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
36	NC_021289	CGTTTG	3	18	1264707	1264724	0 %	50 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.