MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp5

Total Repeats: 54

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_021227	TGG	2	6	28	33	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_021227	ATT	2	6	36	41	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_021227	GTA	2	6	60	65	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_021227	TGA	2	6	181	186	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_021227	CCA	2	6	281	286	33.33 %	0 %	0 %	66.67 %	Non-Coding
6	NC_021227	CGT	2	6	404	409	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_021227	CCA	2	6	558	563	33.33 %	0 %	0 %	66.67 %	Non-Coding
8	NC_021227	AAT	2	6	596	601	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_021227	TAA	2	6	661	666	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_021227	ATC	2	6	927	932	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_021227	CAA	2	6	2967	2972	66.67 %	0 %	0 %	33.33 %	Non-Coding
12	NC_021227	TAC	2	6	3272	3277	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_021227	ACT	2	6	3377	3382	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_021227	TAA	2	6	3872	3877	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_021227	TCT	2	6	3880	3885	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_021227	AAG	2	6	3904	3909	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_021227	CTG	3	9	3921	3929	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_021227	TGC	2	6	3946	3951	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_021227	GCG	2	6	3958	3963	0 %	0 %	66.67 %	33.33 %	Non-Coding
20	NC_021227	ACC	2	6	3985	3990	33.33 %	0 %	0 %	66.67 %	Non-Coding
21	NC_021227	GCG	2	6	4054	4059	0 %	0 %	66.67 %	33.33 %	Non-Coding
22	NC_021227	TCC	2	6	4126	4131	0 %	33.33 %	0 %	66.67 %	Non-Coding
23	NC_021227	CGG	2	6	4244	4249	0 %	0 %	66.67 %	33.33 %	Non-Coding
24	NC_021227	GGA	2	6	4357	4362	33.33 %	0 %	66.67 %	0 %	Non-Coding
25	NC_021227	AAG	2	6	7563	7568	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_021227	AAT	2	6	8133	8138	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_021227	CAT	2	6	10240	10245	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_021227	CAG	2	6	10257	10262	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_021227	GCA	2	6	10322	10327	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_021227	CTG	2	6	10342	10347	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_021227	TAT	3	9	11020	11028	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_021227	AAC	2	6	12422	12427	66.67 %	0 %	0 %	33.33 %	Non-Coding
33	NC_021227	TCC	2	6	12924	12929	0 %	33.33 %	0 %	66.67 %	Non-Coding
34	NC_021227	AGG	2	6	12960	12965	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_021227	AGT	2	6	13056	13061	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
36	NC_021227	TTC	2	6	13423	13428	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_021227	ATT	2	6	13513	13518	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_021227	ACT	2	6	13534	13539	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_021227	GAA	2	6	13546	13551	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_021227	TGA	2	6	14019	14024	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_021227	CAA	3	9	14233	14241	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_021227	CTA	2	6	14252	14257	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_021227	ACT	2	6	14274	14279	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_021227	AAC	2	6	14293	14298	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_021227	CGA	2	6	14331	14336	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
46	NC_021227	TCA	2	6	14536	14541	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_021227	CTA	2	6	14562	14567	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_021227	GCC	2	6	14732	14737	0 %	0 %	33.33 %	66.67 %	Non-Coding
49	NC_021227	AAC	2	6	14866	14871	66.67 %	0 %	0 %	33.33 %	Non-Coding
50	NC_021227	AAC	2	6	14994	14999	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_021227	TCT	2	6	15009	15014	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_021227	CAG	2	6	15786	15791	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_021227	TAA	2	6	15821	15826	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_021227	CTA	2	6	16004	16009	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.