Hexa-nucleotide Repeats of Salmonella enterica subsp. enterica serovar Typhimurium str. U288 plasmid pSTU288-1
Total Repeats: 59
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_021155 | GTACGG | 2 | 12 | 621 | 632 | 16.67 % | 16.67 % | 50 % | 16.67 % | 482907134 |
2 | NC_021155 | ACAGCC | 2 | 12 | 4816 | 4827 | 33.33 % | 0 % | 16.67 % | 50 % | 482907142 |
3 | NC_021155 | TCCGGC | 2 | 12 | 6354 | 6365 | 0 % | 16.67 % | 33.33 % | 50 % | 482907144 |
4 | NC_021155 | CCAGCG | 2 | 12 | 6724 | 6735 | 16.67 % | 0 % | 33.33 % | 50 % | 482907144 |
5 | NC_021155 | ACAGTG | 2 | 12 | 8800 | 8811 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
6 | NC_021155 | GCGACA | 2 | 12 | 14101 | 14112 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
7 | NC_021155 | GCTGTT | 2 | 12 | 18327 | 18338 | 0 % | 50 % | 33.33 % | 16.67 % | 482907163 |
8 | NC_021155 | GGAAGA | 2 | 12 | 20883 | 20894 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
9 | NC_021155 | AAAATT | 2 | 12 | 20980 | 20991 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
10 | NC_021155 | AACAGA | 2 | 12 | 22105 | 22116 | 66.67 % | 0 % | 16.67 % | 16.67 % | 482907170 |
11 | NC_021155 | GGACAA | 2 | 12 | 22829 | 22840 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
12 | NC_021155 | TGGATA | 2 | 12 | 23092 | 23103 | 33.33 % | 33.33 % | 33.33 % | 0 % | 482907171 |
13 | NC_021155 | AATGTG | 2 | 12 | 26334 | 26345 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
14 | NC_021155 | TACCAA | 2 | 12 | 31164 | 31175 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
15 | NC_021155 | CGGGAG | 2 | 12 | 37038 | 37049 | 16.67 % | 0 % | 66.67 % | 16.67 % | 482907188 |
16 | NC_021155 | CGGGGA | 2 | 12 | 37167 | 37178 | 16.67 % | 0 % | 66.67 % | 16.67 % | 482907188 |
17 | NC_021155 | CGTGGT | 2 | 12 | 37370 | 37381 | 0 % | 33.33 % | 50 % | 16.67 % | 482907188 |
18 | NC_021155 | GCCGGT | 2 | 12 | 37976 | 37987 | 0 % | 16.67 % | 50 % | 33.33 % | 482907189 |
19 | NC_021155 | TGGATG | 2 | 12 | 38657 | 38668 | 16.67 % | 33.33 % | 50 % | 0 % | 482907191 |
20 | NC_021155 | TGTCAG | 2 | 12 | 38970 | 38981 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 482907191 |
21 | NC_021155 | ACCACG | 2 | 12 | 39488 | 39499 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
22 | NC_021155 | CGGATT | 2 | 12 | 41213 | 41224 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 482907195 |
23 | NC_021155 | ACCAGC | 2 | 12 | 44081 | 44092 | 33.33 % | 0 % | 16.67 % | 50 % | 482907202 |
24 | NC_021155 | CATCGT | 2 | 12 | 44560 | 44571 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 482907202 |
25 | NC_021155 | CCACAT | 2 | 12 | 47083 | 47094 | 33.33 % | 16.67 % | 0 % | 50 % | 482907203 |
26 | NC_021155 | ACCGTC | 2 | 12 | 47604 | 47615 | 16.67 % | 16.67 % | 16.67 % | 50 % | 482907203 |
27 | NC_021155 | CCCGCT | 2 | 12 | 48505 | 48516 | 0 % | 16.67 % | 16.67 % | 66.67 % | 482907203 |
28 | NC_021155 | GGCTGT | 2 | 12 | 50845 | 50856 | 0 % | 33.33 % | 50 % | 16.67 % | 482907206 |
29 | NC_021155 | ACGGTT | 2 | 12 | 51570 | 51581 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 482907206 |
30 | NC_021155 | TAACTG | 2 | 12 | 56521 | 56532 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 482907209 |
31 | NC_021155 | ACCTTA | 2 | 12 | 68560 | 68571 | 33.33 % | 33.33 % | 0 % | 33.33 % | 482907223 |
32 | NC_021155 | CCACTG | 2 | 12 | 68656 | 68667 | 16.67 % | 16.67 % | 16.67 % | 50 % | 482907223 |
33 | NC_021155 | CGGCAC | 2 | 12 | 71941 | 71952 | 16.67 % | 0 % | 33.33 % | 50 % | 482907230 |
34 | NC_021155 | GGCAGC | 2 | 12 | 72430 | 72441 | 16.67 % | 0 % | 50 % | 33.33 % | 482907230 |
35 | NC_021155 | ATAAAA | 2 | 12 | 73742 | 73753 | 83.33 % | 16.67 % | 0 % | 0 % | 482907232 |
36 | NC_021155 | TATGAA | 2 | 12 | 74538 | 74549 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
37 | NC_021155 | AATTTT | 2 | 12 | 76433 | 76444 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
38 | NC_021155 | TGGAGT | 2 | 12 | 76494 | 76505 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
39 | NC_021155 | AGCGCC | 2 | 12 | 81249 | 81260 | 16.67 % | 0 % | 33.33 % | 50 % | 482907246 |
40 | NC_021155 | ACTGGC | 2 | 12 | 81788 | 81799 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 482907246 |
41 | NC_021155 | GAACAG | 11 | 66 | 83376 | 83441 | 50 % | 0 % | 33.33 % | 16.67 % | 482907249 |
42 | NC_021155 | CAGAGG | 2 | 12 | 83840 | 83851 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
43 | NC_021155 | CCAGCG | 2 | 12 | 97039 | 97050 | 16.67 % | 0 % | 33.33 % | 50 % | 482907270 |
44 | NC_021155 | AGTCCG | 2 | 12 | 99633 | 99644 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
45 | NC_021155 | ATTTCT | 2 | 12 | 102978 | 102989 | 16.67 % | 66.67 % | 0 % | 16.67 % | 482907277 |
46 | NC_021155 | TCCCAT | 2 | 12 | 106506 | 106517 | 16.67 % | 33.33 % | 0 % | 50 % | 482907282 |
47 | NC_021155 | TTGAAT | 2 | 12 | 107513 | 107524 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
48 | NC_021155 | TCTCGC | 2 | 12 | 108176 | 108187 | 0 % | 33.33 % | 16.67 % | 50 % | 482907283 |
49 | NC_021155 | ACAGTG | 2 | 12 | 122370 | 122381 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 482907300 |
50 | NC_021155 | GACAGC | 2 | 12 | 122382 | 122393 | 33.33 % | 0 % | 33.33 % | 33.33 % | 482907300 |
51 | NC_021155 | AGCCTG | 2 | 12 | 124804 | 124815 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 482907305 |
52 | NC_021155 | CCCTGT | 2 | 12 | 125345 | 125356 | 0 % | 33.33 % | 16.67 % | 50 % | 482907306 |
53 | NC_021155 | GGCGCA | 2 | 12 | 126635 | 126646 | 16.67 % | 0 % | 50 % | 33.33 % | 482907308 |
54 | NC_021155 | TTTAGA | 2 | 12 | 130131 | 130142 | 33.33 % | 50 % | 16.67 % | 0 % | 482907313 |
55 | NC_021155 | ATTTTG | 2 | 12 | 131064 | 131075 | 16.67 % | 66.67 % | 16.67 % | 0 % | 482907314 |
56 | NC_021155 | GGCGGT | 2 | 12 | 131108 | 131119 | 0 % | 16.67 % | 66.67 % | 16.67 % | 482907314 |
57 | NC_021155 | CAGCGC | 2 | 12 | 132052 | 132063 | 16.67 % | 0 % | 33.33 % | 50 % | 482907314 |
58 | NC_021155 | CTGAAC | 2 | 12 | 134969 | 134980 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
59 | NC_021155 | GATATC | 2 | 12 | 139224 | 139235 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 482907323 |