Tetra-nucleotide Repeats of Chlamydia trachomatis D/SotonD1 plasmid pSotonD1
Total Repeats: 21
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020986 | ATTG | 2 | 8 | 632 | 639 | 25 % | 50 % | 25 % | 0 % | 478472956 |
2 | NC_020986 | TCTG | 2 | 8 | 1470 | 1477 | 0 % | 50 % | 25 % | 25 % | 478472957 |
3 | NC_020986 | GAAA | 2 | 8 | 1496 | 1503 | 75 % | 0 % | 25 % | 0 % | 478472957 |
4 | NC_020986 | AGGA | 2 | 8 | 1629 | 1636 | 50 % | 0 % | 50 % | 0 % | 478472957 |
5 | NC_020986 | TGTT | 2 | 8 | 1962 | 1969 | 0 % | 75 % | 25 % | 0 % | 478472957 |
6 | NC_020986 | TTCT | 2 | 8 | 2808 | 2815 | 0 % | 75 % | 0 % | 25 % | 478472958 |
7 | NC_020986 | GTTT | 2 | 8 | 3334 | 3341 | 0 % | 75 % | 25 % | 0 % | 478472958 |
8 | NC_020986 | AGGA | 2 | 8 | 3454 | 3461 | 50 % | 0 % | 50 % | 0 % | 478472958 |
9 | NC_020986 | TTTC | 2 | 8 | 3714 | 3721 | 0 % | 75 % | 0 % | 25 % | 478472959 |
10 | NC_020986 | GGAT | 2 | 8 | 3834 | 3841 | 25 % | 25 % | 50 % | 0 % | 478472959 |
11 | NC_020986 | TAAA | 2 | 8 | 4558 | 4565 | 75 % | 25 % | 0 % | 0 % | 478472959 |
12 | NC_020986 | ATTA | 2 | 8 | 4620 | 4627 | 50 % | 50 % | 0 % | 0 % | 478472959 |
13 | NC_020986 | ATTT | 2 | 8 | 4654 | 4661 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
14 | NC_020986 | CAAA | 2 | 8 | 5470 | 5477 | 75 % | 0 % | 0 % | 25 % | 478472960 |
15 | NC_020986 | ATCA | 2 | 8 | 6102 | 6109 | 50 % | 25 % | 0 % | 25 % | 478472962 |
16 | NC_020986 | AATT | 2 | 8 | 6317 | 6324 | 50 % | 50 % | 0 % | 0 % | 478472962 |
17 | NC_020986 | TCGG | 2 | 8 | 6388 | 6395 | 0 % | 25 % | 50 % | 25 % | 478472962 |
18 | NC_020986 | AGTT | 2 | 8 | 7018 | 7025 | 25 % | 50 % | 25 % | 0 % | 478472963 |
19 | NC_020986 | CCAA | 2 | 8 | 7087 | 7094 | 50 % | 0 % | 0 % | 50 % | 478472963 |
20 | NC_020986 | CTTC | 2 | 8 | 7242 | 7249 | 0 % | 50 % | 0 % | 50 % | 478472963 |
21 | NC_020986 | GATA | 2 | 8 | 7277 | 7284 | 50 % | 25 % | 25 % | 0 % | 478472963 |