MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis L2b/CV204 high quality draft genome sequence

Total Repeats: 37

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020976	CAAAAA	2	12	6849	6860	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_020976	AAAAAT	2	12	61528	61539	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_020976	ATCTAG	2	12	77239	77250	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
4	NC_020976	TTTTAG	2	12	116522	116533	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
5	NC_020976	TAAAAA	2	12	121194	121205	83.33 %	16.67 %	0 %	0 %	Non-Coding
6	NC_020976	AGAAAA	2	12	183397	183408	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_020976	TATGAA	3	18	192334	192351	50 %	33.33 %	16.67 %	0 %	Non-Coding
8	NC_020976	TTTTAC	2	12	217655	217666	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
9	NC_020976	TTTTTA	2	12	252187	252198	16.67 %	83.33 %	0 %	0 %	Non-Coding
10	NC_020976	AGGAGA	2	12	267287	267298	50 %	0 %	50 %	0 %	Non-Coding
11	NC_020976	ATATTA	2	12	276183	276194	50 %	50 %	0 %	0 %	Non-Coding
12	NC_020976	AAAAAG	2	12	320353	320364	83.33 %	0 %	16.67 %	0 %	Non-Coding
13	NC_020976	AGAATA	2	12	357833	357844	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
14	NC_020976	ACATCA	2	12	423295	423306	50 %	16.67 %	0 %	33.33 %	Non-Coding
15	NC_020976	TAACTA	2	12	499529	499540	50 %	33.33 %	0 %	16.67 %	Non-Coding
16	NC_020976	AAGAAA	2	12	499542	499553	83.33 %	0 %	16.67 %	0 %	Non-Coding
17	NC_020976	AGAATA	2	12	505517	505528	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_020976	AACTAA	2	12	511249	511260	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
19	NC_020976	TCCCTC	2	12	545275	545286	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_020976	AAAAAT	2	12	563245	563256	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_020976	TAGGGG	2	12	602413	602424	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
22	NC_020976	TCTTTT	2	12	614407	614418	0 %	83.33 %	0 %	16.67 %	Non-Coding
23	NC_020976	TCTGCA	2	12	742054	742065	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
24	NC_020976	TATTTT	2	12	751531	751542	16.67 %	83.33 %	0 %	0 %	Non-Coding
25	NC_020976	GAGAAA	2	12	799001	799012	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_020976	TTTTCT	2	12	801459	801470	0 %	83.33 %	0 %	16.67 %	Non-Coding
27	NC_020976	ATTTTT	2	12	805238	805249	16.67 %	83.33 %	0 %	0 %	Non-Coding
28	NC_020976	TTTTTA	2	12	831718	831729	16.67 %	83.33 %	0 %	0 %	Non-Coding
29	NC_020976	TAAGGA	2	12	852725	852736	50 %	16.67 %	33.33 %	0 %	Non-Coding
30	NC_020976	CCGGAG	2	12	853643	853654	16.67 %	0 %	50 %	33.33 %	Non-Coding
31	NC_020976	CCTCTA	2	12	866788	866799	16.67 %	33.33 %	0 %	50 %	Non-Coding
32	NC_020976	TAAGGA	2	12	874769	874780	50 %	16.67 %	33.33 %	0 %	Non-Coding
33	NC_020976	CCGGAG	2	12	875687	875698	16.67 %	0 %	50 %	33.33 %	Non-Coding
34	NC_020976	GACGGC	2	12	918106	918117	16.67 %	0 %	50 %	33.33 %	Non-Coding
35	NC_020976	AAACAA	2	12	919794	919805	83.33 %	0 %	0 %	16.67 %	Non-Coding
36	NC_020976	AATTTT	2	12	1038826	1038837	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_020976	TAAAAT	2	12	1038838	1038849	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.