MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis E/Bour complete genome

Total Repeats: 37

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020971	CAAAAA	2	12	6850	6861	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_020971	TAGCAT	2	12	49222	49233	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
3	NC_020971	AAAAAT	2	12	61239	61250	83.33 %	16.67 %	0 %	0 %	Non-Coding
4	NC_020971	ATCTAG	2	12	76962	76973	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
5	NC_020971	TTTTAG	2	12	116240	116251	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
6	NC_020971	TAAAAA	2	12	120837	120848	83.33 %	16.67 %	0 %	0 %	Non-Coding
7	NC_020971	AGAAAA	2	12	182464	182475	83.33 %	0 %	16.67 %	0 %	Non-Coding
8	NC_020971	TATGAA	2	12	195238	195249	50 %	33.33 %	16.67 %	0 %	Non-Coding
9	NC_020971	TTTTAC	2	12	221523	221534	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
10	NC_020971	AACCCT	2	12	255240	255251	33.33 %	16.67 %	0 %	50 %	Non-Coding
11	NC_020971	ATTTTT	2	12	256035	256046	16.67 %	83.33 %	0 %	0 %	Non-Coding
12	NC_020971	AGGAGA	2	12	271134	271145	50 %	0 %	50 %	0 %	Non-Coding
13	NC_020971	ATATTA	2	12	280032	280043	50 %	50 %	0 %	0 %	Non-Coding
14	NC_020971	AAAAAT	2	12	322382	322393	83.33 %	16.67 %	0 %	0 %	Non-Coding
15	NC_020971	AAAAAG	2	12	324200	324211	83.33 %	0 %	16.67 %	0 %	Non-Coding
16	NC_020971	AGAATA	2	12	361694	361705	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
17	NC_020971	TAACTA	2	12	503418	503429	50 %	33.33 %	0 %	16.67 %	Non-Coding
18	NC_020971	AAGAAA	2	12	503431	503442	83.33 %	0 %	16.67 %	0 %	Non-Coding
19	NC_020971	AGAATA	2	12	509409	509420	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
20	NC_020971	AACTAA	2	12	515146	515157	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
21	NC_020971	TCCCTC	2	12	549036	549047	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_020971	AAAAAT	2	12	567008	567019	83.33 %	16.67 %	0 %	0 %	Non-Coding
23	NC_020971	TAGGGG	2	12	606161	606172	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
24	NC_020971	TCTTTT	2	12	618146	618157	0 %	83.33 %	0 %	16.67 %	Non-Coding
25	NC_020971	TTATTT	2	12	649358	649369	16.67 %	83.33 %	0 %	0 %	Non-Coding
26	NC_020971	TATTTT	2	12	755307	755318	16.67 %	83.33 %	0 %	0 %	Non-Coding
27	NC_020971	TTTTCT	2	12	805222	805233	0 %	83.33 %	0 %	16.67 %	Non-Coding
28	NC_020971	ATTTTT	2	12	809001	809012	16.67 %	83.33 %	0 %	0 %	Non-Coding
29	NC_020971	ATTTTT	2	12	835480	835491	16.67 %	83.33 %	0 %	0 %	Non-Coding
30	NC_020971	TAAGGA	2	12	856444	856455	50 %	16.67 %	33.33 %	0 %	Non-Coding
31	NC_020971	CCGGAG	2	12	857362	857373	16.67 %	0 %	50 %	33.33 %	Non-Coding
32	NC_020971	CCTCTA	2	12	870483	870494	16.67 %	33.33 %	0 %	50 %	Non-Coding
33	NC_020971	TAAGGA	2	12	878435	878446	50 %	16.67 %	33.33 %	0 %	Non-Coding
34	NC_020971	CCGGAG	2	12	879353	879364	16.67 %	0 %	50 %	33.33 %	Non-Coding
35	NC_020971	GACGGC	2	12	921747	921758	16.67 %	0 %	50 %	33.33 %	Non-Coding
36	NC_020971	AAACAA	2	12	923435	923446	83.33 %	0 %	0 %	16.67 %	Non-Coding
37	NC_020971	TAAAAT	2	12	1042546	1042557	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.